RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 FAM222BQ8WU58 562 aa10.29□□□□□ -0.76
MSH6-213ENST00000614496 INSIG2Q9Y5U4 225 aa10.29□□□□□ -0.76
MSH6-213ENST00000614496 HIGD1CA8MV81 97 aa10.29□□□□□ -0.76
MSH6-213ENST00000614496 ZNF324O75467 553 aaPredicted RBP10.29□□□□□ -0.76
MSH6-213ENST00000614496 TDGF1P3P51864 188 aa10.29□□□□□ -0.76
MSH6-213ENST00000614496 BRWD1-AS2P59051 145 aa10.29□□□□□ -0.76
MSH6-213ENST00000614496 RPL15P61313 204 aaKnown RBP10.29□□□□□ -0.76
MSH6-213ENST00000614496 PRCDQ00LT1 54 aa10.29□□□□□ -0.76
MSH6-213ENST00000614496 TBR1Q16650 682 aa10.29□□□□□ -0.76
MSH6-213ENST00000614496 GNB1LQ9BYB4 327 aa10.29□□□□□ -0.76
MSH6-213ENST00000614496 RNF24Q9Y225 148 aa10.29□□□□□ -0.76
MSH6-213ENST00000614496 ZGRF1Q86YA3 2104 aa10.29□□□□□ -0.76
MSH6-213ENST00000614496 RPL27AP46776 148 aaKnown RBP10.29□□□□□ -0.76
MSH6-213ENST00000614496 PMCHL1Q16048 86 aa10.29□□□□□ -0.76
MSH6-213ENST00000614496 COA6Q5JTJ3 125 aaKnown RBP10.29□□□□□ -0.76
MSH6-213ENST00000614496 NEU1Q99519 415 aa10.29□□□□□ -0.76
MSH6-213ENST00000614496 VPS25Q9BRG1 176 aa10.29□□□□□ -0.76
MSH6-213ENST00000614496 OSTCQ9NRP0 149 aa10.29□□□□□ -0.76
MSH6-213ENST00000614496 COL6A6A6NMZ7 2263 aa10.29□□□□□ -0.76
MSH6-213ENST00000614496 A8MWL6 223 aa10.29□□□□□ -0.76
MSH6-213ENST00000614496 K7EN84 100 aa10.29□□□□□ -0.76
MSH6-213ENST00000614496 CRYABP02511 175 aaKnown RBP10.29□□□□□ -0.76
MSH6-213ENST00000614496 CD69Q07108 199 aa10.29□□□□□ -0.76
MSH6-213ENST00000614496 TIMM23BQ5SRD1 257 aa10.29□□□□□ -0.76
MSH6-213ENST00000614496 OR4C13Q8NGP0 309 aa10.29□□□□□ -0.76
MSH6-213ENST00000614496 ZNF596Q8TC21 504 aa10.29□□□□□ -0.76
MSH6-213ENST00000614496 FBXL7Q9UJT9 491 aa10.29□□□□□ -0.76
MSH6-213ENST00000614496 CDC42EP3Q9UKI2 254 aa10.29□□□□□ -0.76
MSH6-213ENST00000614496 SPRNQ5BIV9 151 aa10.28□□□□□ -0.76
MSH6-213ENST00000614496 FAM162BQ5T6X4 162 aa10.28□□□□□ -0.76
MSH6-213ENST00000614496 ONECUT1Q9UBC0 465 aa10.28□□□□□ -0.76
MSH6-213ENST00000614496 FOXA2Q9Y261 457 aaPredicted RBP10.28□□□□□ -0.76
MSH6-213ENST00000614496 A0A1W2PNU3 283 aaPredicted RBP10.28□□□□□ -0.76
MSH6-213ENST00000614496 AREGP15514 252 aa10.28□□□□□ -0.76
MSH6-213ENST00000614496 C1orf185Q5T7R7 199 aa10.28□□□□□ -0.76
MSH6-213ENST00000614496 C1orf174Q8IYL3 243 aa10.28□□□□□ -0.76
MSH6-213ENST00000614496 TECTAO75443 2155 aa10.28□□□□□ -0.76
MSH6-213ENST00000614496 PLXNB1O43157 2135 aa10.28□□□□□ -0.76
MSH6-213ENST00000614496 TRAV9-1A0A075B6T8 112 aa10.28□□□□□ -0.76
MSH6-213ENST00000614496 IZUMO1RA6ND01 250 aa10.28□□□□□ -0.76
MSH6-213ENST00000614496 C16orf97H3BN30 126 aa10.28□□□□□ -0.76
MSH6-213ENST00000614496 MMP23AO75900 390 aa10.28□□□□□ -0.76
MSH6-213ENST00000614496 CLEC5AQ9NY25 188 aa10.28□□□□□ -0.76
MSH6-213ENST00000614496 FAM90A9PA6NNJ1 464 aa10.27□□□□□ -0.76
MSH6-213ENST00000614496 C9JCJ5 164 aa10.27□□□□□ -0.76
MSH6-213ENST00000614496 GPX1P07203 203 aa10.27□□□□□ -0.76
MSH6-213ENST00000614496 NBEAP1P0C6P0 100 aa10.27□□□□□ -0.76
MSH6-213ENST00000614496 SELENOTP62341 195 aa10.27□□□□□ -0.76
MSH6-213ENST00000614496 TMEM208Q9BTX3 173 aa10.27□□□□□ -0.76
MSH6-213ENST00000614496 S4R3C0 116 aa10.27□□□□□ -0.76
MSH6-213ENST00000614496 COL5A1P20908 1838 aaPredicted RBP10.27□□□□□ -0.76
MSH6-213ENST00000614496 LOC389332A0A1B0GUA5 103 aa10.27□□□□□ -0.77
MSH6-213ENST00000614496 LEPROTL1O95214 131 aa10.27□□□□□ -0.77
MSH6-213ENST00000614496 RPRMLQ8N4K4 120 aa10.27□□□□□ -0.77
MSH6-213ENST00000614496 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.27□□□□□ -0.77
MSH6-213ENST00000614496 PMCHL2Q9BQD1 86 aa10.27□□□□□ -0.77
MSH6-213ENST00000614496 MRPL32Q9BYC8 188 aaKnown RBP10.27□□□□□ -0.77
MSH6-213ENST00000614496 TMEM191AQ9H0A3 160 aa10.27□□□□□ -0.77
MSH6-213ENST00000614496 LAMTOR2Q9Y2Q5 125 aa10.27□□□□□ -0.77
MSH6-213ENST00000614496 CFAP54Q96N23 3096 aa10.27□□□□□ -0.77
MSH6-213ENST00000614496 IGHV1-46P01743 117 aa10.27□□□□□ -0.77
MSH6-213ENST00000614496 C3orf79P0CE67 100 aa10.27□□□□□ -0.77
MSH6-213ENST00000614496 MBNL2Q5VZF2 373 aaKnown RBP10.27□□□□□ -0.77
MSH6-213ENST00000614496 OR4F17Q8NGA8 305 aa10.27□□□□□ -0.77
MSH6-213ENST00000614496 RASL11BQ9BPW5 248 aa10.27□□□□□ -0.77
MSH6-213ENST00000614496 C19orf24Q9BVV8 132 aa10.27□□□□□ -0.77
MSH6-213ENST00000614496 TRGV8A0A0C4DH27 118 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 A0A1W2PRE2 83 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 CSN1S1P47710 185 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 CX3CL1P78423 397 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 C19orf35Q6ZS72 473 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 GOLT1AQ6ZVE7 132 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 STXBP6Q8NFX7 210 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 OSR1Q8TAX0 266 aaPredicted RBP10.26□□□□□ -0.77
MSH6-213ENST00000614496 Q8TCH9 128 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 SLC25A15Q9Y619 301 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 KMT2EQ8IZD2 1858 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 M0QZ24 198 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 DLEU1O43261 78 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 OR5AL1P0C617 328 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 CD40P25942 277 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 YPEL3P61236 119 aaPredicted RBP10.26□□□□□ -0.77
MSH6-213ENST00000614496 NHLH1Q02575 133 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 SLC25A33Q9BSK2 321 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 PLSCR4Q9NRQ2 329 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 ZFHX2Q9C0A1 2572 aaPredicted RBP10.26□□□□□ -0.77
MSH6-213ENST00000614496 MALRD1Q5VYJ5 2156 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 NCKAP5O14513 1909 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 CDX4O14627 284 aaPredicted RBP10.26□□□□□ -0.77
MSH6-213ENST00000614496 RPUSD1Q9UJJ7 312 aaKnown RBP10.26□□□□□ -0.77
MSH6-213ENST00000614496 GGTLC3B5MD39 225 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 VWC2Q2TAL6 325 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 UTF1Q5T230 341 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 ZNF738Q8NE65 137 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 NUDT10Q8NFP7 164 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 OR8A1Q8NGG7 326 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 OR8B3Q8NGG8 313 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 NUDT11Q96G61 164 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 HIGD1AQ9Y241 93 aa10.26□□□□□ -0.77
MSH6-213ENST00000614496 SNAI2O43623 268 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms