RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 USF2Q15853 346 aaPredicted RBP11.91□□□□□ -0.5
CDH1-213ENST00000612417 PQLC2Q6ZP29 291 aa11.91□□□□□ -0.5
CDH1-213ENST00000612417 OR5AN1Q8NGI8 311 aa11.91□□□□□ -0.5
CDH1-213ENST00000612417 EAF1Q96JC9 268 aaPredicted RBP11.91□□□□□ -0.5
CDH1-213ENST00000612417 TECRQ9NZ01 308 aaKnown RBP11.91□□□□□ -0.5
CDH1-213ENST00000612417 IL36BQ9NZH7 164 aa11.91□□□□□ -0.5
CDH1-213ENST00000612417 ZNRD1Q9P1U0 126 aa11.91□□□□□ -0.5
CDH1-213ENST00000612417 APOA2P02652 100 aa11.9□□□□□ -0.5
CDH1-213ENST00000612417 FAM71F2Q6NXP2 309 aa11.9□□□□□ -0.5
CDH1-213ENST00000612417 CLEC2AQ6UVW9 174 aa11.9□□□□□ -0.5
CDH1-213ENST00000612417 CACNG8Q8WXS5 425 aa11.9□□□□□ -0.5
CDH1-213ENST00000612417 A6NJY4 79 aa11.9□□□□□ -0.51
CDH1-213ENST00000612417 HSBP1L1C9JCN9 74 aa11.9□□□□□ -0.51
CDH1-213ENST00000612417 H0YJW9 148 aa11.9□□□□□ -0.51
CDH1-213ENST00000612417 CD69Q07108 199 aa11.9□□□□□ -0.51
CDH1-213ENST00000612417 TMEM177Q53S58 311 aa11.9□□□□□ -0.51
CDH1-213ENST00000612417 ZNF503Q96F45 646 aa11.9□□□□□ -0.51
CDH1-213ENST00000612417 NOL4LQ96MY1 436 aaPredicted RBP11.9□□□□□ -0.51
CDH1-213ENST00000612417 ZNF714Q96N38 554 aa11.9□□□□□ -0.51
CDH1-213ENST00000612417 MRPL20Q9BYC9 149 aaKnown RBP11.9□□□□□ -0.51
CDH1-213ENST00000612417 NDUFA4L2Q9NRX3 87 aa11.9□□□□□ -0.51
CDH1-213ENST00000612417 ACTL6BO94805 426 aa11.89□□□□□ -0.51
CDH1-213ENST00000612417 TAS2R45P59539 299 aa11.89□□□□□ -0.51
CDH1-213ENST00000612417 SELENOTP62341 195 aa11.89□□□□□ -0.51
CDH1-213ENST00000612417 PSG5Q15238 335 aa11.89□□□□□ -0.51
CDH1-213ENST00000612417 MOB3BQ86TA1 216 aa11.89□□□□□ -0.51
CDH1-213ENST00000612417 C8orf31Q8N9H6 132 aa11.89□□□□□ -0.51
CDH1-213ENST00000612417 ZNF596Q8TC21 504 aa11.89□□□□□ -0.51
CDH1-213ENST00000612417 HARBI1Q96MB7 349 aa11.89□□□□□ -0.51
CDH1-213ENST00000612417 HRNRQ86YZ3 2850 aaPredicted RBP11.89□□□□□ -0.51
CDH1-213ENST00000612417 FCN3O75636 299 aa11.88□□□□□ -0.51
CDH1-213ENST00000612417 OR10J4P0C629 311 aa11.88□□□□□ -0.51
CDH1-213ENST00000612417 OR10J1P30954 320 aa11.88□□□□□ -0.51
CDH1-213ENST00000612417 HLA-DRB5Q30154 266 aa11.88□□□□□ -0.51
CDH1-213ENST00000612417 OR4A5Q8NH83 315 aa11.88□□□□□ -0.51
CDH1-213ENST00000612417 ZFYVE26Q68DK2 2539 aa11.88□□□□□ -0.51
CDH1-213ENST00000612417 LYNX1G3V0Z9 82 aa11.88□□□□□ -0.51
CDH1-213ENST00000612417 DLEU1O43261 78 aa11.88□□□□□ -0.51
CDH1-213ENST00000612417 LYNX1P0DP58 116 aa11.88□□□□□ -0.51
CDH1-213ENST00000612417 HNF1AP20823 631 aa11.88□□□□□ -0.51
CDH1-213ENST00000612417 USF1P22415 310 aaPredicted RBP11.88□□□□□ -0.51
CDH1-213ENST00000612417 COL8A2P25067 703 aa11.88□□□□□ -0.51
CDH1-213ENST00000612417 LGALS4P56470 323 aa11.88□□□□□ -0.51
CDH1-213ENST00000612417 RPL8P62917 257 aaKnown RBP11.88□□□□□ -0.51
CDH1-213ENST00000612417 LINC00311Q8N616 119 aa11.88□□□□□ -0.51
CDH1-213ENST00000612417 MRPL32Q9BYC8 188 aaKnown RBP11.88□□□□□ -0.51
CDH1-213ENST00000612417 COMMD5Q9GZQ3 224 aa11.88□□□□□ -0.51
CDH1-213ENST00000612417 PRO1933Q9H354 126 aa11.88□□□□□ -0.51
CDH1-213ENST00000612417 A0A1W2PRE2 83 aa11.87□□□□□ -0.51
CDH1-213ENST00000612417 PSMB11A5LHX3 300 aa11.87□□□□□ -0.51
CDH1-213ENST00000612417 TNFRSF13BO14836 293 aaPredicted RBP11.87□□□□□ -0.51
CDH1-213ENST00000612417 ADMP35318 185 aa11.87□□□□□ -0.51
CDH1-213ENST00000612417 ZNF90Q03938 601 aa11.87□□□□□ -0.51
CDH1-213ENST00000612417 TMEM200BQ69YZ2 307 aa11.87□□□□□ -0.51
CDH1-213ENST00000612417 OR10W1Q8NGF6 305 aa11.87□□□□□ -0.51
CDH1-213ENST00000612417 TMEM167AQ8TBQ9 72 aa11.87□□□□□ -0.51
CDH1-213ENST00000612417 NDUFAF3Q9BU61 184 aa11.87□□□□□ -0.51
CDH1-213ENST00000612417 V9GYV3 84 aa11.87□□□□□ -0.51
CDH1-213ENST00000612417 A0A1W2PN81 502 aa11.87□□□□□ -0.51
CDH1-213ENST00000612417 HELTA6NFD8 242 aa11.87□□□□□ -0.51
CDH1-213ENST00000612417 M0QZK8 103 aa11.87□□□□□ -0.51
CDH1-213ENST00000612417 CCL3L1P16619 93 aa11.87□□□□□ -0.51
CDH1-213ENST00000612417 GNG4P50150 75 aa11.87□□□□□ -0.51
CDH1-213ENST00000612417 PPOXP50336 477 aa11.87□□□□□ -0.51
CDH1-213ENST00000612417 ERHP84090 104 aaKnown RBP11.87□□□□□ -0.51
CDH1-213ENST00000612417 CENPWQ5EE01 88 aa11.87□□□□□ -0.51
CDH1-213ENST00000612417 LYPD2Q6UXB3 125 aa11.87□□□□□ -0.51
CDH1-213ENST00000612417 PDPNQ86YL7 162 aa11.87□□□□□ -0.51
CDH1-213ENST00000612417 MRPL41Q8IXM3 137 aaKnown RBP11.87□□□□□ -0.51
CDH1-213ENST00000612417 ZNF664Q8N3J9 261 aa11.87□□□□□ -0.51
CDH1-213ENST00000612417 OR4C13Q8NGP0 309 aa11.87□□□□□ -0.51
CDH1-213ENST00000612417 OR9G1Q8NH87 305 aa11.87□□□□□ -0.51
CDH1-213ENST00000612417 VSTM2AQ8TAG5 236 aa11.87□□□□□ -0.51
CDH1-213ENST00000612417 FLYWCH2Q96CP2 140 aaKnown RBP11.87□□□□□ -0.51
CDH1-213ENST00000612417 RNF2Q99496 336 aa11.87□□□□□ -0.51
CDH1-213ENST00000612417 SLC25A33Q9BSK2 321 aa11.87□□□□□ -0.51
CDH1-213ENST00000612417 RAB1BQ9H0U4 201 aa11.87□□□□□ -0.51
CDH1-213ENST00000612417 CBLN4Q9NTU7 201 aa11.87□□□□□ -0.51
CDH1-213ENST00000612417 DCHS2Q6V1P9 2916 aa11.86□□□□□ -0.51
CDH1-213ENST00000612417 A8MWP6 167 aa11.86□□□□□ -0.51
CDH1-213ENST00000612417 C19orf84I3L1E1 186 aa11.86□□□□□ -0.51
CDH1-213ENST00000612417 SLC17A3O00476 420 aa11.86□□□□□ -0.51
CDH1-213ENST00000612417 PRB1P04280 392 aa11.86□□□□□ -0.51
CDH1-213ENST00000612417 C8orf88P0DMB2 117 aa11.86□□□□□ -0.51
CDH1-213ENST00000612417 ZNF137PP52743 207 aa11.86□□□□□ -0.51
CDH1-213ENST00000612417 IQCJQ1A5X6 159 aa11.86□□□□□ -0.51
CDH1-213ENST00000612417 RPEL1Q2QD12 228 aa11.86□□□□□ -0.51
CDH1-213ENST00000612417 TMEM186Q96B77 213 aa11.86□□□□□ -0.51
CDH1-213ENST00000612417 SPTAN1Q13813 2472 aaKnown RBP11.86□□□□□ -0.51
CDH1-213ENST00000612417 TRBV9A0A0B4J1U6 114 aa11.85□□□□□ -0.51
CDH1-213ENST00000612417 GGTLC3B5MD39 225 aa11.85□□□□□ -0.51
CDH1-213ENST00000612417 NDUFB3O43676 98 aa11.85□□□□□ -0.51
CDH1-213ENST00000612417 OR7C2O60412 319 aa11.85□□□□□ -0.51
CDH1-213ENST00000612417 GATA2P23769 480 aaPredicted RBP11.85□□□□□ -0.51
CDH1-213ENST00000612417 CRYBB3P26998 211 aa11.85□□□□□ -0.51
CDH1-213ENST00000612417 LRRC10Q5BKY1 277 aa11.85□□□□□ -0.51
CDH1-213ENST00000612417 TMEM256Q8N2U0 113 aa11.85□□□□□ -0.51
CDH1-213ENST00000612417 H1FXQ92522 213 aaKnown RBP11.85□□□□□ -0.51
CDH1-213ENST00000612417 ST6GALNAC6Q969X2 333 aa11.85□□□□□ -0.51
CDH1-213ENST00000612417 RALYQ9UKM9 306 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms