RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 BET1LQ9NYM9 111 aa10.79□□□□□ -0.68
TCF3-220ENST00000611869 MED12LQ86YW9 2145 aa10.79□□□□□ -0.68
TCF3-220ENST00000611869 TIMM23O14925 209 aa10.79□□□□□ -0.68
TCF3-220ENST00000611869 PRSS33Q8NF86 280 aa10.79□□□□□ -0.68
TCF3-220ENST00000611869 PGLYRP4Q96LB8 373 aa10.79□□□□□ -0.68
TCF3-220ENST00000611869 MGST2Q99735 147 aa10.79□□□□□ -0.68
TCF3-220ENST00000611869 CBLN4Q9NTU7 201 aa10.79□□□□□ -0.68
TCF3-220ENST00000611869 LAMA3Q16787 3333 aa10.79□□□□□ -0.68
TCF3-220ENST00000611869 E7EQL1 145 aa10.79□□□□□ -0.68
TCF3-220ENST00000611869 SRIP30626 198 aa10.79□□□□□ -0.68
TCF3-220ENST00000611869 OR5R1Q8NH85 324 aa10.79□□□□□ -0.68
TCF3-220ENST00000611869 ARFGEF3Q5TH69 2177 aa10.79□□□□□ -0.68
TCF3-220ENST00000611869 CEACAM8P31997 349 aaPredicted RBP10.78□□□□□ -0.68
TCF3-220ENST00000611869 MLANAQ16655 118 aa10.78□□□□□ -0.68
TCF3-220ENST00000611869 HLA-DQA1P01909 254 aa10.78□□□□□ -0.68
TCF3-220ENST00000611869 DERL1Q9BUN8 251 aa10.78□□□□□ -0.68
TCF3-220ENST00000611869 IGHV3-49A0A0A0MS15 119 aa10.78□□□□□ -0.68
TCF3-220ENST00000611869 IGHV2-26A0A0B4J1V2 119 aa10.78□□□□□ -0.68
TCF3-220ENST00000611869 GPX4P36969 197 aaPredicted RBP10.78□□□□□ -0.68
TCF3-220ENST00000611869 WFDC3Q8IUB2 231 aa10.78□□□□□ -0.68
TCF3-220ENST00000611869 TRAV5A0A0B4J249 113 aa10.78□□□□□ -0.68
TCF3-220ENST00000611869 OR5AL1P0C617 328 aa10.78□□□□□ -0.68
TCF3-220ENST00000611869 STAG3L2P0CL84 134 aa10.78□□□□□ -0.68
TCF3-220ENST00000611869 STAG3L3P0CL85 134 aa10.78□□□□□ -0.68
TCF3-220ENST00000611869 LOXL3P58215 753 aa10.78□□□□□ -0.68
TCF3-220ENST00000611869 SLC25A48Q6ZT89 311 aaKnown RBP10.78□□□□□ -0.68
TCF3-220ENST00000611869 OCC1Q8TAD7 63 aa10.78□□□□□ -0.68
TCF3-220ENST00000611869 K7ENP7 123 aa10.77□□□□□ -0.68
TCF3-220ENST00000611869 CD81P60033 236 aa10.77□□□□□ -0.68
TCF3-220ENST00000611869 RNASE7Q9H1E1 156 aaKnown RBP10.77□□□□□ -0.68
TCF3-220ENST00000611869 DKK4Q9UBT3 224 aa10.77□□□□□ -0.68
TCF3-220ENST00000611869 RABAC1Q9UI14 185 aa10.77□□□□□ -0.68
TCF3-220ENST00000611869 ZNF257Q9Y2Q1 563 aa10.77□□□□□ -0.68
TCF3-220ENST00000611869 ATRXP46100 2492 aa10.77□□□□□ -0.68
TCF3-220ENST00000611869 BMPR1BO00238 502 aa10.77□□□□□ -0.69
TCF3-220ENST00000611869 PEX7O00628 323 aa10.77□□□□□ -0.69
TCF3-220ENST00000611869 FOXH1O75593 365 aa10.77□□□□□ -0.69
TCF3-220ENST00000611869 WNT2P09544 360 aa10.77□□□□□ -0.69
TCF3-220ENST00000611869 C11orf53Q8IXP5 236 aa10.77□□□□□ -0.69
TCF3-220ENST00000611869 TRAV30A0A087WSZ9 112 aa10.77□□□□□ -0.69
TCF3-220ENST00000611869 A0A1B0GW64 132 aa10.77□□□□□ -0.69
TCF3-220ENST00000611869 PRB4P10163 310 aaPredicted RBP10.77□□□□□ -0.69
TCF3-220ENST00000611869 COL8A2P25067 703 aa10.77□□□□□ -0.69
TCF3-220ENST00000611869 H0YJW9 148 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 NBR2O15453 112 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 HIST1H2BKO60814 126 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 AMY1AP04745 511 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 HIST1H2BJP06899 126 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 HIST1H2BOP23527 126 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 HIST1H2BBP33778 126 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 DLX1P56177 255 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 HIST1H2BDP58876 126 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 HIST1H2BCP62807 126 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 NHLH1Q02575 133 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 TCF15Q12870 199 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 HIST2H2BEQ16778 126 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.76□□□□□ -0.69
TCF3-220ENST00000611869 TCF23Q7RTU1 214 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 HIST1H2BHQ93079 126 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 HIST1H2BNQ99877 126 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 HIST1H2BMQ99879 126 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 THBDP07204 575 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 CA7P43166 264 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 PDLIM4P50479 330 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 ZNF134P52741 427 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 PKIAP61925 76 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 GNG5P63218 68 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 PIMREGQ9BSJ6 248 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 IL36BQ9NZH7 164 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 DIRC3C9JPN6 131 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 MMP23AO75900 390 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 SMIM17P0DL12 118 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 RPL7P18124 248 aaKnown RBP10.76□□□□□ -0.69
TCF3-220ENST00000611869 NOTCH2Q04721 2471 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 C11orf42Q8N5U0 333 aa10.76□□□□□ -0.69
TCF3-220ENST00000611869 HOXA5P20719 270 aa10.75□□□□□ -0.69
TCF3-220ENST00000611869 KLRD1Q13241 179 aa10.75□□□□□ -0.69
TCF3-220ENST00000611869 IGFL2Q6UWQ7 119 aa10.75□□□□□ -0.69
TCF3-220ENST00000611869 TMEM183AQ8IXX5 376 aa10.75□□□□□ -0.69
TCF3-220ENST00000611869 TEX45Q8NA69 505 aa10.75□□□□□ -0.69
TCF3-220ENST00000611869 ARPC1AQ92747 370 aa10.75□□□□□ -0.69
TCF3-220ENST00000611869 C21orf62Q9NYP8 219 aa10.75□□□□□ -0.69
TCF3-220ENST00000611869 TCRBV4S1A1TA0A5B7 111 aa10.75□□□□□ -0.69
TCF3-220ENST00000611869 TMEM189A5PLL7 270 aa10.75□□□□□ -0.69
TCF3-220ENST00000611869 C15orf65H3BRN8 121 aa10.75□□□□□ -0.69
TCF3-220ENST00000611869 FCER1GP30273 86 aa10.75□□□□□ -0.69
TCF3-220ENST00000611869 KIR3DL3Q8N743 410 aa10.75□□□□□ -0.69
TCF3-220ENST00000611869 CHODLQ9H9P2 273 aa10.75□□□□□ -0.69
TCF3-220ENST00000611869 FBXL7Q9UJT9 491 aa10.75□□□□□ -0.69
TCF3-220ENST00000611869 G0S2P27469 103 aa10.75□□□□□ -0.69
TCF3-220ENST00000611869 C2orf83Q53S99 150 aa10.75□□□□□ -0.69
TCF3-220ENST00000611869 AGMATQ9BSE5 352 aa10.75□□□□□ -0.69
TCF3-220ENST00000611869 MSRB2Q9Y3D2 182 aa10.75□□□□□ -0.69
TCF3-220ENST00000611869 IGLV3-9A0A075B6K5 115 aa10.74□□□□□ -0.69
TCF3-220ENST00000611869 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.74□□□□□ -0.69
TCF3-220ENST00000611869 IGHV3-66A0A0C4DH42 116 aa10.74□□□□□ -0.69
TCF3-220ENST00000611869 LOC389332A0A1B0GUA5 103 aa10.74□□□□□ -0.69
TCF3-220ENST00000611869 A1L4Q6 167 aa10.74□□□□□ -0.69
TCF3-220ENST00000611869 ZNF207O43670 478 aaKnown RBP10.74□□□□□ -0.69
TCF3-220ENST00000611869 GATA4P43694 442 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms