RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 IFITM5A6NNB3 132 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 PIRO00625 290 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 COX7A2P2O60397 106 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 LTAP01374 205 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 IFNA7P01567 189 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 APODP05090 189 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 FGF7P21781 194 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 RAB5CP51148 216 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 DAPP51397 102 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 NDUFA6P56556 154 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 CDK6Q00534 326 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 CAV1Q03135 178 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 LDLRAD2Q5SZI1 272 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 NCMAPQ5T1S8 102 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 MRPL2Q5T653 305 aaKnown RBP2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 FKBP1CQ5VVH2 108 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 RASL11AQ6T310 242 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 GLIPR1L1Q6UWM5 242 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 C16orf47Q6ZP98 133 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 Q6ZS49 121 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 KTN1-AS1Q86SY8 53 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 OR4C16Q8NGL9 310 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 SLC25A40Q8TBP6 338 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 ISOC1Q96CN7 298 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 SLAMF6Q96DU3 332 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 ZNF471Q9BX82 626 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 AICDAQ9GZX7 198 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 MED28Q9H204 178 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 CXorf21Q9HAI6 301 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 CA10Q9NS85 328 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 TVP23BQ9NYZ1 205 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 METTL1Q9UBP6 276 aaKnown RBP2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 BOKQ9UMX3 212 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 MYOM3Q5VTT5 1437 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 SETD1AO15047 1707 aaKnown RBP2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 KIAA1551Q9HCM1 1747 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 NLRC5Q86WI3 1866 aa2.22□□□□□ -2.05
SMCHD1-213ENST00000609587 MIA3Q5JRA6 1907 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 LOC102724200A0A096LPH7 203 aaPredicted RBP2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 TRBV7-6A0A0J9YX20 115 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 TMEM212A6NML5 194 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 CLDN25C9JDP6 229 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 DEDDO75618 318 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 GPX1P07203 203 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 UCHL1P09936 223 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 IGLC6P0CF74 106 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 LINC00694P0DN24 101 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 FKBP1AP62942 108 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 ADIGQ0VDE8 80 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 FABP9Q0Z7S8 132 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 EIF3IQ13347 325 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 IGFBP7Q16270 282 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 DNMBPQ6XZF7 1577 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 LINC00596Q86U02 117 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 C1orf174Q8IYL3 243 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 C4orf33Q8N1A6 199 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 SLC22A24Q8N4F4 322 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 TCTEX1D1Q8N7M0 179 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 TERB2Q8NHR7 220 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 MRPL30Q8TCC3 161 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 RPS4Y2Q8TD47 263 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 NUP210Q8TEM1 1887 aaPredicted RBP2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 PP6455Q8WZ26 134 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 YPEL4Q96NS1 127 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 PEBP4Q96S96 227 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 SDF2Q99470 211 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 OTORQ9NRC9 128 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 ZNF230Q9UIE0 474 aaPredicted RBP2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 KIAA1107Q9UPP5 1409 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 GPR179Q6PRD1 2367 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 AKAP12Q02952 1782 aa2.21□□□□□ -2.06
SMCHD1-213ENST00000609587 PZPP20742 1482 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 CEP162Q5TB80 1403 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 IGKV1D-43A0A0B4J1Z2 117 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 IGKV1-6A0A0C4DH72 117 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 DHRS12A0PJE2 317 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 TMEM72A0PK05 275 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 TMEM218A2RU14 115 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 LINC00862A6NCI5 91 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 LEUTXA8MZ59 168 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 J3QRK9 145 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 COX7A2LO14548 114 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 DPM2O94777 84 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 IGKV1-39P01597 117 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 IGKV1D-39P04432 117 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 PSMB8P28062 276 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 IMPA1P29218 277 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 DEFA3P59666 94 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 FGF12P61328 243 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 BTG2P78543 158 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 SP6Q3SY56 376 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 UBE2NLQ5JXB2 153 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 NXNL2Q5VZ03 156 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 EBLN2Q6P2I7 272 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 MORN3Q6PF18 240 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 PDPNQ86YL7 162 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 C3orf22Q8N5N4 141 aa2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-213ENST00000609587 OR11G2Q8NGC1 345 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms