RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 RAB40CQ96S21 281 aa12.46□□□□□ -0.41
CHMP4A-211ENST00000609024 XCL2Q9UBD3 114 aa12.46□□□□□ -0.41
CHMP4A-211ENST00000609024 AGRNO00468 2067 aa12.46□□□□□ -0.42
CHMP4A-211ENST00000609024 A0A1B0GU03 582 aa12.45□□□□□ -0.42
CHMP4A-211ENST00000609024 TMEM189A5PLL7 270 aa12.45□□□□□ -0.42
CHMP4A-211ENST00000609024 TMEM50AO95807 157 aa12.45□□□□□ -0.42
CHMP4A-211ENST00000609024 PMP2P02689 132 aa12.45□□□□□ -0.42
CHMP4A-211ENST00000609024 PSMB9P28065 219 aa12.45□□□□□ -0.42
CHMP4A-211ENST00000609024 AP2S1P53680 142 aaPredicted RBP12.45□□□□□ -0.42
CHMP4A-211ENST00000609024 TAS2R46P59540 309 aa12.45□□□□□ -0.42
CHMP4A-211ENST00000609024 SNRPD3P62318 126 aaKnown RBP12.45□□□□□ -0.42
CHMP4A-211ENST00000609024 PHLDA2Q53GA4 152 aa12.45□□□□□ -0.42
CHMP4A-211ENST00000609024 LPCAT3Q6P1A2 487 aa12.45□□□□□ -0.42
CHMP4A-211ENST00000609024 MAPKAPK5-AS1Q8N8E1 139 aa12.45□□□□□ -0.42
CHMP4A-211ENST00000609024 OR5H6Q8NGV6 325 aa12.45□□□□□ -0.42
CHMP4A-211ENST00000609024 PDCD10Q9BUL8 212 aa12.45□□□□□ -0.42
CHMP4A-211ENST00000609024 SCRT1Q9BWW7 348 aa12.45□□□□□ -0.42
CHMP4A-211ENST00000609024 PKD1P98161 4303 aa12.45□□□□□ -0.42
CHMP4A-211ENST00000609024 DNAH11Q96DT5 4516 aa12.44□□□□□ -0.42
CHMP4A-211ENST00000609024 RNF212Q495C1 297 aa12.44□□□□□ -0.42
CHMP4A-211ENST00000609024 SLC35G3Q8N808 338 aa12.44□□□□□ -0.42
CHMP4A-211ENST00000609024 SLC25A38Q96DW6 304 aa12.44□□□□□ -0.42
CHMP4A-211ENST00000609024 TEX48A0A1B0GUV7 120 aa12.43□□□□□ -0.42
CHMP4A-211ENST00000609024 CD74P04233 296 aa12.43□□□□□ -0.42
CHMP4A-211ENST00000609024 HTN3P15516 51 aa12.43□□□□□ -0.42
CHMP4A-211ENST00000609024 CRYBB3P26998 211 aa12.43□□□□□ -0.42
CHMP4A-211ENST00000609024 SDC2P34741 201 aa12.43□□□□□ -0.42
CHMP4A-211ENST00000609024 SPINK9Q5DT21 86 aa12.43□□□□□ -0.42
CHMP4A-211ENST00000609024 Q6ZR54 194 aa12.43□□□□□ -0.42
CHMP4A-211ENST00000609024 DCANP1Q8TF63 244 aa12.43□□□□□ -0.42
CHMP4A-211ENST00000609024 CNBD2Q96M20 576 aa12.43□□□□□ -0.42
CHMP4A-211ENST00000609024 RNF167Q9H6Y7 350 aa12.43□□□□□ -0.42
CHMP4A-211ENST00000609024 ENY2Q9NPA8 101 aa12.43□□□□□ -0.42
CHMP4A-211ENST00000609024 FAM212BQ9NTI7 297 aaPredicted RBP12.43□□□□□ -0.42
CHMP4A-211ENST00000609024 TMED3Q9Y3Q3 217 aa12.43□□□□□ -0.42
CHMP4A-211ENST00000609024 DYNC1H1Q14204 4646 aaKnown RBP12.43□□□□□ -0.42
CHMP4A-211ENST00000609024 OPRK1P41145 380 aa12.42□□□□□ -0.42
CHMP4A-211ENST00000609024 PPP5CP53041 499 aa12.42□□□□□ -0.42
CHMP4A-211ENST00000609024 TSPAN5P62079 268 aa12.42□□□□□ -0.42
CHMP4A-211ENST00000609024 TBC1D26Q86UD7 250 aa12.42□□□□□ -0.42
CHMP4A-211ENST00000609024 S100A16Q96FQ6 103 aaKnown RBP12.42□□□□□ -0.42
CHMP4A-211ENST00000609024 SEC22AQ96IW7 307 aa12.42□□□□□ -0.42
CHMP4A-211ENST00000609024 IGHV3OR16-12A0A075B7B8 117 aa12.41□□□□□ -0.42
CHMP4A-211ENST00000609024 TRAV30A0A087WSZ9 112 aa12.41□□□□□ -0.42
CHMP4A-211ENST00000609024 SMIM9A6NGZ8 99 aa12.41□□□□□ -0.42
CHMP4A-211ENST00000609024 CLN5O75503 358 aa12.41□□□□□ -0.42
CHMP4A-211ENST00000609024 CDK2AP2O75956 126 aa12.41□□□□□ -0.42
CHMP4A-211ENST00000609024 MRGPRFQ96AM1 343 aa12.41□□□□□ -0.42
CHMP4A-211ENST00000609024 FXYD6Q9H0Q3 95 aa12.41□□□□□ -0.42
CHMP4A-211ENST00000609024 VCX3BQ9H321 246 aa12.41□□□□□ -0.42
CHMP4A-211ENST00000609024 HOXA1P49639 335 aaPredicted RBP12.4□□□□□ -0.42
CHMP4A-211ENST00000609024 NIPSNAP3BQ9BS92 247 aa12.4□□□□□ -0.42
CHMP4A-211ENST00000609024 ATG101Q9BSB4 218 aa12.4□□□□□ -0.42
CHMP4A-211ENST00000609024 RFNGQ9Y644 331 aa12.4□□□□□ -0.42
CHMP4A-211ENST00000609024 HNRNPCP07910 306 aaKnown RBP eCLIP12.39□□□□□ -0.43
CHMP4A-211ENST00000609024 CLEC2LP0C7M8 214 aa12.39□□□□□ -0.43
CHMP4A-211ENST00000609024 OR4X1Q8NH49 305 aa12.39□□□□□ -0.43
CHMP4A-211ENST00000609024 Q8WTZ3 238 aa12.39□□□□□ -0.43
CHMP4A-211ENST00000609024 FCGR1BQ92637 280 aa12.39□□□□□ -0.43
CHMP4A-211ENST00000609024 NEU1Q99519 415 aa12.39□□□□□ -0.43
CHMP4A-211ENST00000609024 LOC100506127A0A0U1RQW1 187 aa12.38□□□□□ -0.43
CHMP4A-211ENST00000609024 ATG12O94817 140 aa12.38□□□□□ -0.43
CHMP4A-211ENST00000609024 HSPA13P48723 471 aa12.38□□□□□ -0.43
CHMP4A-211ENST00000609024 AKR1C2P52895 323 aa12.38□□□□□ -0.43
CHMP4A-211ENST00000609024 TIGITQ495A1 244 aa12.38□□□□□ -0.43
CHMP4A-211ENST00000609024 TMEM69Q5SWH9 247 aa12.38□□□□□ -0.43
CHMP4A-211ENST00000609024 RPS10-NUDT3A0A1W2PQS6 291 aa12.37□□□□□ -0.43
CHMP4A-211ENST00000609024 H3BMM0 161 aa12.37□□□□□ -0.43
CHMP4A-211ENST00000609024 HLA-DMAP28067 261 aa12.37□□□□□ -0.43
CHMP4A-211ENST00000609024 HRH1P35367 487 aa12.37□□□□□ -0.43
CHMP4A-211ENST00000609024 TAS2R20P59543 309 aa12.37□□□□□ -0.43
CHMP4A-211ENST00000609024 GABARAPL2P60520 117 aa12.37□□□□□ -0.43
CHMP4A-211ENST00000609024 FAM222AQ5U5X8 452 aa12.37□□□□□ -0.43
CHMP4A-211ENST00000609024 C16orf54Q6UWD8 224 aa12.37□□□□□ -0.43
CHMP4A-211ENST00000609024 ZNF705AQ6ZN79 300 aaPredicted RBP12.37□□□□□ -0.43
CHMP4A-211ENST00000609024 NRG4Q8WWG1 115 aa12.37□□□□□ -0.43
CHMP4A-211ENST00000609024 FAM90A26D6RGX4 464 aa12.36□□□□□ -0.43
CHMP4A-211ENST00000609024 IGKV1-39P01597 117 aa12.36□□□□□ -0.43
CHMP4A-211ENST00000609024 IGKV3-20P01619 116 aa12.36□□□□□ -0.43
CHMP4A-211ENST00000609024 IGKV1D-39P04432 117 aa12.36□□□□□ -0.43
CHMP4A-211ENST00000609024 PRSS3P35030 304 aa12.36□□□□□ -0.43
CHMP4A-211ENST00000609024 FAM3BP58499 235 aaPredicted RBP12.36□□□□□ -0.43
CHMP4A-211ENST00000609024 RNASE11Q8TAA1 199 aaKnown RBP12.36□□□□□ -0.43
CHMP4A-211ENST00000609024 C7orf50Q9BRJ6 194 aaKnown RBP12.36□□□□□ -0.43
CHMP4A-211ENST00000609024 SEPSECSQ9HD40 501 aaKnown RBP12.36□□□□□ -0.43
CHMP4A-211ENST00000609024 NRN1Q9NPD7 142 aa12.36□□□□□ -0.43
CHMP4A-211ENST00000609024 DKK2Q9UBU2 259 aa12.36□□□□□ -0.43
CHMP4A-211ENST00000609024 ZNF705FA8MVS1 300 aaPredicted RBP12.35□□□□□ -0.43
CHMP4A-211ENST00000609024 INS-IGF2F8WCM5 200 aa12.35□□□□□ -0.43
CHMP4A-211ENST00000609024 GSTZ1O43708 216 aaPredicted RBP12.35□□□□□ -0.43
CHMP4A-211ENST00000609024 TMEM127O75204 238 aa12.35□□□□□ -0.43
CHMP4A-211ENST00000609024 ZNF705DP0CH99 300 aaPredicted RBP12.35□□□□□ -0.43
CHMP4A-211ENST00000609024 ZNF705BP0CI00 300 aaPredicted RBP12.35□□□□□ -0.43
CHMP4A-211ENST00000609024 RNASE2P10153 161 aaKnown RBP12.35□□□□□ -0.43
CHMP4A-211ENST00000609024 ETV6P41212 452 aa12.35□□□□□ -0.43
CHMP4A-211ENST00000609024 TNP2Q05952 138 aa12.35□□□□□ -0.43
CHMP4A-211ENST00000609024 IZUMO4Q1ZYL8 232 aa12.35□□□□□ -0.43
CHMP4A-211ENST00000609024 UBE2NLQ5JXB2 153 aa12.35□□□□□ -0.43
CHMP4A-211ENST00000609024 GSG1LQ6UXU4 331 aa12.35□□□□□ -0.43
CHMP4A-211ENST00000609024 SIGLEC15Q6ZMC9 328 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms