RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 EGFEM1PQ0D2K5 195 aa8.95□□□□□ -0.98
LINC00539-204ENST00000608957 CLINT1Q14677 625 aa8.95□□□□□ -0.98
LINC00539-204ENST00000608957 REC114Q7Z4M0 266 aa8.95□□□□□ -0.98
LINC00539-204ENST00000608957 HAPLN4Q86UW8 402 aa8.95□□□□□ -0.98
LINC00539-204ENST00000608957 OR5C1Q8NGR4 320 aa8.95□□□□□ -0.98
LINC00539-204ENST00000608957 STOML3Q8TAV4 291 aa8.95□□□□□ -0.98
LINC00539-204ENST00000608957 SRSF12Q8WXF0 261 aaKnown RBP8.95□□□□□ -0.98
LINC00539-204ENST00000608957 ST8SIA2Q92186 375 aa8.95□□□□□ -0.98
LINC00539-204ENST00000608957 GNB4Q9HAV0 340 aa8.95□□□□□ -0.98
LINC00539-204ENST00000608957 U3KQ87 197 aa8.95□□□□□ -0.98
LINC00539-204ENST00000608957 TRAV41A0A0B4J266 112 aa8.94□□□□□ -0.98
LINC00539-204ENST00000608957 A0A1B0GW64 132 aa8.94□□□□□ -0.98
LINC00539-204ENST00000608957 WI2-2373I1.2A0A1W2PRP0 233 aa8.94□□□□□ -0.98
LINC00539-204ENST00000608957 PMS2P5A8MQ11 134 aa8.94□□□□□ -0.98
LINC00539-204ENST00000608957 E7EUB6 86 aa8.94□□□□□ -0.98
LINC00539-204ENST00000608957 RGS13O14921 159 aa8.94□□□□□ -0.98
LINC00539-204ENST00000608957 TPT1P13693 172 aaKnown RBP8.94□□□□□ -0.98
LINC00539-204ENST00000608957 HTR2BP41595 481 aa8.94□□□□□ -0.98
LINC00539-204ENST00000608957 RAB11AP62491 216 aa8.94□□□□□ -0.98
LINC00539-204ENST00000608957 EIF5AP63241 154 aaKnown RBP8.94□□□□□ -0.98
LINC00539-204ENST00000608957 CX3CL1P78423 397 aa8.94□□□□□ -0.98
LINC00539-204ENST00000608957 ERHP84090 104 aaKnown RBP8.94□□□□□ -0.98
LINC00539-204ENST00000608957 SLC38A11Q08AI6 406 aa8.94□□□□□ -0.98
LINC00539-204ENST00000608957 ARL16Q0P5N6 197 aa8.94□□□□□ -0.98
LINC00539-204ENST00000608957 ZNF266Q14584 549 aa8.94□□□□□ -0.98
LINC00539-204ENST00000608957 ASPHD1Q5U4P2 390 aa8.94□□□□□ -0.98
LINC00539-204ENST00000608957 RPL7L1Q6DKI1 246 aaKnown RBP8.94□□□□□ -0.98
LINC00539-204ENST00000608957 OR8G2PQ6IF36 304 aa8.94□□□□□ -0.98
LINC00539-204ENST00000608957 LILRB2Q8N423 598 aa8.94□□□□□ -0.98
LINC00539-204ENST00000608957 ZNF491Q8N8L2 437 aa8.94□□□□□ -0.98
LINC00539-204ENST00000608957 OR10W1Q8NGF6 305 aa8.94□□□□□ -0.98
LINC00539-204ENST00000608957 C4orf3Q8WVX3 66 aa8.94□□□□□ -0.98
LINC00539-204ENST00000608957 ATP5SQ99766 215 aa8.94□□□□□ -0.98
LINC00539-204ENST00000608957 SRSF8Q9BRL6 282 aaKnown RBP8.94□□□□□ -0.98
LINC00539-204ENST00000608957 WFDC1Q9HC57 220 aa8.94□□□□□ -0.98
LINC00539-204ENST00000608957 BORCS7-ASMTA0A0B4J1R7 106 aa8.93□□□□□ -0.98
LINC00539-204ENST00000608957 IGLC7A0M8Q6 106 aa8.93□□□□□ -0.98
LINC00539-204ENST00000608957 TEX22C9J3V5 150 aa8.93□□□□□ -0.98
LINC00539-204ENST00000608957 I3L521 148 aa8.93□□□□□ -0.98
LINC00539-204ENST00000608957 DFFBO76075 338 aa8.93□□□□□ -0.98
LINC00539-204ENST00000608957 JTBO76095 146 aa8.93□□□□□ -0.98
LINC00539-204ENST00000608957 CNIH1O95406 144 aa8.93□□□□□ -0.98
LINC00539-204ENST00000608957 CFDP00746 253 aaPredicted RBP8.93□□□□□ -0.98
LINC00539-204ENST00000608957 RNASE2P10153 161 aaKnown RBP8.93□□□□□ -0.98
LINC00539-204ENST00000608957 ATP5IP56385 69 aaPredicted RBP8.93□□□□□ -0.98
LINC00539-204ENST00000608957 WT1-ASQ06250 92 aa8.93□□□□□ -0.98
LINC00539-204ENST00000608957 FHL3Q13643 280 aa8.93□□□□□ -0.98
LINC00539-204ENST00000608957 ECSCRQ19T08 205 aa8.93□□□□□ -0.98
LINC00539-204ENST00000608957 BSXQ3C1V8 233 aa8.93□□□□□ -0.98
LINC00539-204ENST00000608957 C2orf83Q53S99 150 aa8.93□□□□□ -0.98
LINC00539-204ENST00000608957 TEX261Q6UWH6 196 aa8.93□□□□□ -0.98
LINC00539-204ENST00000608957 ZNF767PQ75MW2 155 aa8.93□□□□□ -0.98
LINC00539-204ENST00000608957 HSD17B13Q7Z5P4 300 aaPredicted RBP8.93□□□□□ -0.98
LINC00539-204ENST00000608957 UBAC2Q8NBM4 344 aa8.93□□□□□ -0.98
LINC00539-204ENST00000608957 OR10P1Q8NGE3 313 aa8.93□□□□□ -0.98
LINC00539-204ENST00000608957 TMEM170AQ8WVE7 144 aa8.93□□□□□ -0.98
LINC00539-204ENST00000608957 ARPC1AQ92747 370 aa8.93□□□□□ -0.98
LINC00539-204ENST00000608957 PINX1Q96BK5 328 aaKnown RBP8.93□□□□□ -0.98
LINC00539-204ENST00000608957 FAM103A1Q9BTL3 118 aaKnown RBP8.93□□□□□ -0.98
LINC00539-204ENST00000608957 IFNA7P01567 189 aa8.92□□□□□ -0.98
LINC00539-204ENST00000608957 IFNA4P05014 189 aa8.92□□□□□ -0.98
LINC00539-204ENST00000608957 OR13C7P0DN81 318 aa8.92□□□□□ -0.98
LINC00539-204ENST00000608957 SNCAP37840 140 aa8.92□□□□□ -0.98
LINC00539-204ENST00000608957 EXOSC2Q13868 293 aaKnown RBP8.92□□□□□ -0.98
LINC00539-204ENST00000608957 FXYD3Q14802 87 aa8.92□□□□□ -0.98
LINC00539-204ENST00000608957 ATP6V1FQ16864 119 aa8.92□□□□□ -0.98
LINC00539-204ENST00000608957 ZNF562Q6V9R5 426 aa8.92□□□□□ -0.98
LINC00539-204ENST00000608957 ZNF114Q8NC26 417 aa8.92□□□□□ -0.98
LINC00539-204ENST00000608957 ZNF680Q8NEM1 530 aa8.92□□□□□ -0.98
LINC00539-204ENST00000608957 ABHD5Q8WTS1 349 aa8.92□□□□□ -0.98
LINC00539-204ENST00000608957 OR5B12Q96R08 314 aa8.92□□□□□ -0.98
LINC00539-204ENST00000608957 TMEM147Q9BVK8 224 aa8.92□□□□□ -0.98
LINC00539-204ENST00000608957 SORL1Q92673 2214 aa8.92□□□□□ -0.98
LINC00539-204ENST00000608957 UBE2L5PA0A1B0GUS4 154 aa8.91□□□□□ -0.98
LINC00539-204ENST00000608957 PRSS46E5RG02 174 aa8.91□□□□□ -0.98
LINC00539-204ENST00000608957 REG1AP05451 166 aa8.91□□□□□ -0.98
LINC00539-204ENST00000608957 AREGP15514 252 aa8.91□□□□□ -0.98
LINC00539-204ENST00000608957 RAB9AP51151 201 aa8.91□□□□□ -0.98
LINC00539-204ENST00000608957 SUB1P53999 127 aaKnown RBP eCLIP8.91□□□□□ -0.98
LINC00539-204ENST00000608957 RUNX1Q01196 453 aa8.91□□□□□ -0.98
LINC00539-204ENST00000608957 ALKAL2Q6UX46 152 aa8.91□□□□□ -0.98
LINC00539-204ENST00000608957 BAP18Q8IXM2 172 aa8.91□□□□□ -0.98
LINC00539-204ENST00000608957 PHYHIPLQ96FC7 376 aa8.91□□□□□ -0.98
LINC00539-204ENST00000608957 UBE2E2Q96LR5 201 aa8.91□□□□□ -0.98
LINC00539-204ENST00000608957 ARV1Q9H2C2 271 aa8.91□□□□□ -0.98
LINC00539-204ENST00000608957 UQCC1Q9NVA1 299 aa8.91□□□□□ -0.98
LINC00539-204ENST00000608957 UBQLN2Q9UHD9 624 aa8.91□□□□□ -0.98
LINC00539-204ENST00000608957 IFNA5P01569 189 aa8.9□□□□□ -0.98
LINC00539-204ENST00000608957 APELAP0DMC3 54 aa8.9□□□□□ -0.98
LINC00539-204ENST00000608957 DLK1P80370 383 aa8.9□□□□□ -0.98
LINC00539-204ENST00000608957 VWC2Q2TAL6 325 aa8.9□□□□□ -0.98
LINC00539-204ENST00000608957 SLC25A24Q6NUK1 477 aa8.9□□□□□ -0.98
LINC00539-204ENST00000608957 LFNGQ8NES3 379 aa8.9□□□□□ -0.98
LINC00539-204ENST00000608957 OR11H1Q8NG94 326 aa8.9□□□□□ -0.98
LINC00539-204ENST00000608957 SCARB1Q8WTV0 552 aa8.9□□□□□ -0.98
LINC00539-204ENST00000608957 GINS3Q9BRX5 216 aa8.9□□□□□ -0.98
LINC00539-204ENST00000608957 GGACTQ9BVM4 153 aa8.9□□□□□ -0.98
LINC00539-204ENST00000608957 PARD6GQ9BYG4 376 aaPredicted RBP8.9□□□□□ -0.98
LINC00539-204ENST00000608957 EIF5AL1Q6IS14 154 aaKnown RBP8.89□□□□□ -0.99
LINC00539-204ENST00000608957 UNQ5815/PRO19632Q6UWF5 114 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms