RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 LINC00869P0C866 280 aa15.2■□□□□ 0.02
TUBB4B-202ENST00000604929 CDC34P49427 236 aaPredicted RBP15.2■□□□□ 0.02
TUBB4B-202ENST00000604929 RND2P52198 227 aa15.2■□□□□ 0.02
TUBB4B-202ENST00000604929 LOXL1Q08397 574 aaPredicted RBP15.2■□□□□ 0.02
TUBB4B-202ENST00000604929 RXFP4Q8TDU9 374 aa15.2■□□□□ 0.02
TUBB4B-202ENST00000604929 ARPC1AQ92747 370 aa15.2■□□□□ 0.02
TUBB4B-202ENST00000604929 PRRC2AP48634 2157 aaKnown RBP15.2■□□□□ 0.02
TUBB4B-202ENST00000604929 MT-CO2P00403 227 aa15.19■□□□□ 0.02
TUBB4B-202ENST00000604929 CTRB1P17538 263 aa15.19■□□□□ 0.02
TUBB4B-202ENST00000604929 PRR20EP86478 221 aa15.19■□□□□ 0.02
TUBB4B-202ENST00000604929 PRR20CP86479 221 aa15.19■□□□□ 0.02
TUBB4B-202ENST00000604929 PRR20DP86480 221 aa15.19■□□□□ 0.02
TUBB4B-202ENST00000604929 PRR20BP86481 221 aa15.19■□□□□ 0.02
TUBB4B-202ENST00000604929 PRR20AP86496 221 aa15.19■□□□□ 0.02
TUBB4B-202ENST00000604929 GUCA2BQ16661 112 aa15.19■□□□□ 0.02
TUBB4B-202ENST00000604929 CTRB2Q6GPI1 263 aa15.19■□□□□ 0.02
TUBB4B-202ENST00000604929 SSX3Q99909 188 aa15.19■□□□□ 0.02
TUBB4B-202ENST00000604929 SEPSECSQ9HD40 501 aaKnown RBP15.19■□□□□ 0.02
TUBB4B-202ENST00000604929 IGHV7-81A0A0B4J1V7 117 aa15.19■□□□□ 0.02
TUBB4B-202ENST00000604929 ZNF90Q03938 601 aa15.19■□□□□ 0.02
TUBB4B-202ENST00000604929 PVRIGQ6DKI7 326 aa15.19■□□□□ 0.02
TUBB4B-202ENST00000604929 ATRAIDQ6UW56 229 aa15.19■□□□□ 0.02
TUBB4B-202ENST00000604929 PIFOQ8TCI5 191 aa15.19■□□□□ 0.02
TUBB4B-202ENST00000604929 HSPB9Q9BQS6 159 aa15.19■□□□□ 0.02
TUBB4B-202ENST00000604929 GATA3P23771 443 aa15.18■□□□□ 0.02
TUBB4B-202ENST00000604929 CEBPGP53567 150 aa15.18■□□□□ 0.02
TUBB4B-202ENST00000604929 ASPHD1Q5U4P2 390 aa15.18■□□□□ 0.02
TUBB4B-202ENST00000604929 C22orf15Q8WYQ4 148 aa15.18■□□□□ 0.02
TUBB4B-202ENST00000604929 SEC11CQ9BY50 192 aa15.18■□□□□ 0.02
TUBB4B-202ENST00000604929 ICAM4Q14773 271 aa15.17■□□□□ 0.02
TUBB4B-202ENST00000604929 ETFRF1Q6IPR1 90 aa15.17■□□□□ 0.02
TUBB4B-202ENST00000604929 OR5T1Q8NG75 326 aa15.17■□□□□ 0.02
TUBB4B-202ENST00000604929 SRSF8Q9BRL6 282 aaKnown RBP15.17■□□□□ 0.02
TUBB4B-202ENST00000604929 MEGF9Q9H1U4 602 aa15.17■□□□□ 0.02
TUBB4B-202ENST00000604929 GSX1Q9H4S2 264 aaPredicted RBP15.17■□□□□ 0.02
TUBB4B-202ENST00000604929 KCNIP2Q9NS61 270 aa15.17■□□□□ 0.02
TUBB4B-202ENST00000604929 SOX15O60248 233 aa15.17■□□□□ 0.02
TUBB4B-202ENST00000604929 EGR2P11161 476 aaPredicted RBP15.17■□□□□ 0.02
TUBB4B-202ENST00000604929 SPATA31B1PQ5VZV4 182 aa15.17■□□□□ 0.02
TUBB4B-202ENST00000604929 GATAD1Q8WUU5 269 aa15.17■□□□□ 0.02
TUBB4B-202ENST00000604929 SLC35B3Q9H1N7 401 aa15.17■□□□□ 0.02
TUBB4B-202ENST00000604929 TEX15Q9BXT5 2789 aa15.16■□□□□ 0.02
TUBB4B-202ENST00000604929 IGKV1D-37A0A075B6S9 117 aa15.16■□□□□ 0.02
TUBB4B-202ENST00000604929 LINC01548A6NM66 108 aa15.16■□□□□ 0.02
TUBB4B-202ENST00000604929 SEC14L6B5MCN3 397 aa15.16■□□□□ 0.02
TUBB4B-202ENST00000604929 CORTO00230 105 aa15.16■□□□□ 0.02
TUBB4B-202ENST00000604929 CRYGCP07315 174 aa15.16■□□□□ 0.02
TUBB4B-202ENST00000604929 IGHV4-31P0DP07 118 aa15.16■□□□□ 0.02
TUBB4B-202ENST00000604929 LY6EQ16553 131 aa15.16■□□□□ 0.02
TUBB4B-202ENST00000604929 TMEM249Q2WGJ8 235 aa15.16■□□□□ 0.02
TUBB4B-202ENST00000604929 C10orf91Q5T1B1 145 aa15.16■□□□□ 0.02
TUBB4B-202ENST00000604929 CYP2G1PQ6ZSU1 146 aa15.16■□□□□ 0.02
TUBB4B-202ENST00000604929 CCDC168Q8NDH2 2452 aa15.16■□□□□ 0.02
TUBB4B-202ENST00000604929 KRTAP1-3Q8IUG1 177 aa15.16■□□□□ 0.02
TUBB4B-202ENST00000604929 HLA-DRB1P01911 266 aa15.15■□□□□ 0.02
TUBB4B-202ENST00000604929 ZNF506Q5JVG8 444 aa15.15■□□□□ 0.02
TUBB4B-202ENST00000604929 FAM78BQ5VT40 261 aa15.15■□□□□ 0.02
TUBB4B-202ENST00000604929 MBD6Q96DN6 1003 aa15.15■□□□□ 0.02
TUBB4B-202ENST00000604929 S4R3C0 116 aa15.15■□□□□ 0.02
TUBB4B-202ENST00000604929 ITPR2Q14571 2701 aa15.15■□□□□ 0.02
TUBB4B-202ENST00000604929 CR1P17927 2039 aa15.14■□□□□ 0.01
TUBB4B-202ENST00000604929 LOC102723971A0A1B0GUV8 181 aa15.14■□□□□ 0.01
TUBB4B-202ENST00000604929 H3BUX3 64 aa15.14■□□□□ 0.01
TUBB4B-202ENST00000604929 I3L2K1 104 aa15.14■□□□□ 0.01
TUBB4B-202ENST00000604929 BCL2P10415 239 aa15.14■□□□□ 0.01
TUBB4B-202ENST00000604929 SLC35E3Q7Z769 313 aa15.14■□□□□ 0.01
TUBB4B-202ENST00000604929 RBM14Q96PK6 669 aaKnown RBP15.14■□□□□ 0.01
TUBB4B-202ENST00000604929 TNFRSF19Q9NS68 423 aa15.14■□□□□ 0.01
TUBB4B-202ENST00000604929 DOK5Q9P104 306 aa15.14■□□□□ 0.01
TUBB4B-202ENST00000604929 MDFIC2A0A1B0GVS7 189 aa15.14■□□□□ 0.01
TUBB4B-202ENST00000604929 TCRBV4S1A1TA0A5B7 111 aa15.14■□□□□ 0.01
TUBB4B-202ENST00000604929 BCL6BQ8N143 479 aaPredicted RBP15.14■□□□□ 0.01
TUBB4B-202ENST00000604929 THAP8Q8NA92 274 aa15.14■□□□□ 0.01
TUBB4B-202ENST00000604929 TMEM116Q8NCL8 245 aa15.14■□□□□ 0.01
TUBB4B-202ENST00000604929 TMUB1Q9BVT8 246 aa15.14■□□□□ 0.01
TUBB4B-202ENST00000604929 CARHSP1Q9Y2V2 147 aaKnown RBP15.14■□□□□ 0.01
TUBB4B-202ENST00000604929 SRP19P09132 144 aaKnown RBP15.13■□□□□ 0.01
TUBB4B-202ENST00000604929 RHOBP62745 196 aa15.13■□□□□ 0.01
TUBB4B-202ENST00000604929 KHDC3LQ587J8 217 aa15.13■□□□□ 0.01
TUBB4B-202ENST00000604929 MIR17HGQ75NE6 70 aa15.13■□□□□ 0.01
TUBB4B-202ENST00000604929 SVBPQ8N300 66 aa15.13■□□□□ 0.01
TUBB4B-202ENST00000604929 TTC9CQ8N5M4 171 aa15.13■□□□□ 0.01
TUBB4B-202ENST00000604929 C5orf56Q8N8D9 126 aa15.13■□□□□ 0.01
TUBB4B-202ENST00000604929 WFDC11Q8NEX6 87 aa15.13■□□□□ 0.01
TUBB4B-202ENST00000604929 TMEM37Q8WXS4 190 aa15.13■□□□□ 0.01
TUBB4B-202ENST00000604929 CREBBPQ92793 2442 aa15.13■□□□□ 0.01
TUBB4B-202ENST00000604929 ARL14EPLP0DKL9 152 aa15.12■□□□□ 0.01
TUBB4B-202ENST00000604929 ECSCRQ19T08 205 aa15.12■□□□□ 0.01
TUBB4B-202ENST00000604929 RBMS3Q6XE24 437 aaKnown RBP15.12■□□□□ 0.01
TUBB4B-202ENST00000604929 FANCD2OSQ96PS1 177 aa15.12■□□□□ 0.01
TUBB4B-202ENST00000604929 SMDT1Q9H4I9 107 aa15.12■□□□□ 0.01
TUBB4B-202ENST00000604929 NPIPB5A8MRT5 1133 aa15.12■□□□□ 0.01
TUBB4B-202ENST00000604929 K7EIM0 57 aa15.12■□□□□ 0.01
TUBB4B-202ENST00000604929 ATP6V0E1O15342 81 aa15.12■□□□□ 0.01
TUBB4B-202ENST00000604929 HSPB1P04792 205 aaKnown RBP15.12■□□□□ 0.01
TUBB4B-202ENST00000604929 STAG3L2P0CL84 134 aa15.12■□□□□ 0.01
TUBB4B-202ENST00000604929 STAG3L3P0CL85 134 aa15.12■□□□□ 0.01
TUBB4B-202ENST00000604929 BTN1A1Q13410 526 aa15.12■□□□□ 0.01
TUBB4B-202ENST00000604929 PRSS57Q6UWY2 283 aa15.12■□□□□ 0.01
TUBB4B-202ENST00000604929 CYB561D1Q8N8Q1 229 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms