RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 ZNRF2Q8NHG8 242 aa8.32□□□□□ -1.08
PDLIM1P1-201ENST00000604187 FKBP11Q9NYL4 201 aa8.32□□□□□ -1.08
PDLIM1P1-201ENST00000604187 VPS13BQ7Z7G8 4022 aa8.32□□□□□ -1.08
PDLIM1P1-201ENST00000604187 H3BMM0 161 aa8.31□□□□□ -1.08
PDLIM1P1-201ENST00000604187 CRYBB3P26998 211 aa8.31□□□□□ -1.08
PDLIM1P1-201ENST00000604187 GNRHRP30968 328 aa8.31□□□□□ -1.08
PDLIM1P1-201ENST00000604187 PPP5CP53041 499 aa8.31□□□□□ -1.08
PDLIM1P1-201ENST00000604187 KRTAP10-2P60368 255 aa8.31□□□□□ -1.08
PDLIM1P1-201ENST00000604187 HOGA1Q86XE5 327 aa8.31□□□□□ -1.08
PDLIM1P1-201ENST00000604187 NARS2Q96I59 477 aaKnown RBP8.31□□□□□ -1.08
PDLIM1P1-201ENST00000604187 TSC22D3Q99576 134 aa8.31□□□□□ -1.08
PDLIM1P1-201ENST00000604187 MGLLQ99685 303 aa8.31□□□□□ -1.08
PDLIM1P1-201ENST00000604187 SCN3BQ9NY72 215 aa8.31□□□□□ -1.08
PDLIM1P1-201ENST00000604187 AGRNO00468 2067 aa8.31□□□□□ -1.08
PDLIM1P1-201ENST00000604187 HMCN2Q8NDA2 5059 aa8.3□□□□□ -1.08
PDLIM1P1-201ENST00000604187 SMIM9A6NGZ8 99 aa8.3□□□□□ -1.08
PDLIM1P1-201ENST00000604187 PGLYRP1O75594 196 aaPredicted RBP8.3□□□□□ -1.08
PDLIM1P1-201ENST00000604187 SCGNO76038 276 aa8.3□□□□□ -1.08
PDLIM1P1-201ENST00000604187 EIF2B2P49770 351 aaKnown RBP8.3□□□□□ -1.08
PDLIM1P1-201ENST00000604187 HERV-K104P61576 105 aa8.3□□□□□ -1.08
PDLIM1P1-201ENST00000604187 PRCDQ00LT1 54 aa8.3□□□□□ -1.08
PDLIM1P1-201ENST00000604187 KCTD21Q4G0X4 260 aa8.3□□□□□ -1.08
PDLIM1P1-201ENST00000604187 CADM3Q8N126 398 aa8.3□□□□□ -1.08
PDLIM1P1-201ENST00000604187 C15orf53Q8NAA6 179 aa8.3□□□□□ -1.08
PDLIM1P1-201ENST00000604187 FAM90A26D6RGX4 464 aa8.29□□□□□ -1.08
PDLIM1P1-201ENST00000604187 TMEM50AO95807 157 aa8.29□□□□□ -1.08
PDLIM1P1-201ENST00000604187 IGKV3-20P01619 116 aa8.29□□□□□ -1.08
PDLIM1P1-201ENST00000604187 FXYD7P58549 80 aa8.29□□□□□ -1.08
PDLIM1P1-201ENST00000604187 SNRPD3P62318 126 aaKnown RBP8.29□□□□□ -1.08
PDLIM1P1-201ENST00000604187 OXA1LQ15070 435 aa8.29□□□□□ -1.08
PDLIM1P1-201ENST00000604187 SPINK9Q5DT21 86 aa8.29□□□□□ -1.08
PDLIM1P1-201ENST00000604187 OGFRL1Q5TC84 451 aaPredicted RBP8.29□□□□□ -1.08
PDLIM1P1-201ENST00000604187 BORCS5Q969J3 196 aa8.29□□□□□ -1.08
PDLIM1P1-201ENST00000604187 YTHDF2Q9Y5A9 579 aaKnown RBP8.29□□□□□ -1.08
PDLIM1P1-201ENST00000604187 FLG2Q5D862 2391 aaPredicted RBP8.28□□□□□ -1.08
PDLIM1P1-201ENST00000604187 RGS10O43665 173 aa8.28□□□□□ -1.08
PDLIM1P1-201ENST00000604187 HLA-DRB4P13762 266 aa8.28□□□□□ -1.08
PDLIM1P1-201ENST00000604187 DAD1P61803 113 aa8.28□□□□□ -1.08
PDLIM1P1-201ENST00000604187 C22orf42Q6IC83 251 aa8.28□□□□□ -1.08
PDLIM1P1-201ENST00000604187 OR4A16Q8NH70 328 aa8.28□□□□□ -1.08
PDLIM1P1-201ENST00000604187 LGALS14Q8TCE9 139 aa8.28□□□□□ -1.08
PDLIM1P1-201ENST00000604187 TMEM230Q96A57 120 aa8.28□□□□□ -1.08
PDLIM1P1-201ENST00000604187 RHBDL2Q9NX52 303 aa8.28□□□□□ -1.08
PDLIM1P1-201ENST00000604187 MRPL36Q9P0J6 103 aaKnown RBP8.28□□□□□ -1.08
PDLIM1P1-201ENST00000604187 HLA-DRB4X5D2U9 266 aa8.28□□□□□ -1.08
PDLIM1P1-201ENST00000604187 TRAV18A0A075B6X5 111 aa8.27□□□□□ -1.09
PDLIM1P1-201ENST00000604187 LOC102723971A0A1B0GUV8 181 aa8.27□□□□□ -1.09
PDLIM1P1-201ENST00000604187 NOTOA8MTQ0 251 aa8.27□□□□□ -1.09
PDLIM1P1-201ENST00000604187 ERHP84090 104 aaKnown RBP8.27□□□□□ -1.09
PDLIM1P1-201ENST00000604187 GSG1LQ6UXU4 331 aa8.27□□□□□ -1.09
PDLIM1P1-201ENST00000604187 CMTM1Q8IZ96 169 aa8.27□□□□□ -1.09
PDLIM1P1-201ENST00000604187 OR5AP2Q8NGF4 316 aa8.27□□□□□ -1.09
PDLIM1P1-201ENST00000604187 GLMPQ8WWB7 406 aa8.27□□□□□ -1.09
PDLIM1P1-201ENST00000604187 DUSP21Q9H596 190 aa8.27□□□□□ -1.09
PDLIM1P1-201ENST00000604187 DAPK2Q9UIK4 370 aa8.27□□□□□ -1.09
PDLIM1P1-201ENST00000604187 TPRKBQ9Y3C4 175 aa8.27□□□□□ -1.09
PDLIM1P1-201ENST00000604187 RPS10-NUDT3A0A1W2PQS6 291 aa8.26□□□□□ -1.09
PDLIM1P1-201ENST00000604187 CLN5O75503 358 aa8.26□□□□□ -1.09
PDLIM1P1-201ENST00000604187 SCGB2A1O75556 95 aa8.26□□□□□ -1.09
PDLIM1P1-201ENST00000604187 NUDT3O95989 172 aa8.26□□□□□ -1.09
PDLIM1P1-201ENST00000604187 HBE1P02100 147 aa8.26□□□□□ -1.09
PDLIM1P1-201ENST00000604187 SNCAP37840 140 aa8.26□□□□□ -1.09
PDLIM1P1-201ENST00000604187 AP2S1P53680 142 aaPredicted RBP8.26□□□□□ -1.09
PDLIM1P1-201ENST00000604187 DEFB1P60022 68 aa8.26□□□□□ -1.09
PDLIM1P1-201ENST00000604187 HSPE1P61604 102 aaKnown RBP8.26□□□□□ -1.09
PDLIM1P1-201ENST00000604187 TIGITQ495A1 244 aa8.26□□□□□ -1.09
PDLIM1P1-201ENST00000604187 H2BFWTQ7Z2G1 175 aa8.26□□□□□ -1.09
PDLIM1P1-201ENST00000604187 ZNF2Q9BSG1 426 aaPredicted RBP8.26□□□□□ -1.09
PDLIM1P1-201ENST00000604187 NRN1Q9NPD7 142 aa8.26□□□□□ -1.09
PDLIM1P1-201ENST00000604187 NDUFB11Q9NX14 153 aa8.26□□□□□ -1.09
PDLIM1P1-201ENST00000604187 EHFQ9NZC4 300 aa8.26□□□□□ -1.09
PDLIM1P1-201ENST00000604187 TRDV1A0A1B0GX56 115 aa8.25□□□□□ -1.09
PDLIM1P1-201ENST00000604187 MEIS3P1A6NDR6 274 aa8.25□□□□□ -1.09
PDLIM1P1-201ENST00000604187 IGKV1-17P01599 117 aa8.25□□□□□ -1.09
PDLIM1P1-201ENST00000604187 CCL18P55774 89 aa8.25□□□□□ -1.09
PDLIM1P1-201ENST00000604187 GDF5OSQ5U4N7 250 aa8.25□□□□□ -1.09
PDLIM1P1-201ENST00000604187 Q5VSD8 79 aa8.25□□□□□ -1.09
PDLIM1P1-201ENST00000604187 C16orf54Q6UWD8 224 aa8.25□□□□□ -1.09
PDLIM1P1-201ENST00000604187 ZNF709Q8N972 641 aa8.25□□□□□ -1.09
PDLIM1P1-201ENST00000604187 SEC22AQ96IW7 307 aa8.25□□□□□ -1.09
PDLIM1P1-201ENST00000604187 C7orf50Q9BRJ6 194 aaKnown RBP8.25□□□□□ -1.09
PDLIM1P1-201ENST00000604187 KRTAP1-5Q9BYS1 174 aa8.25□□□□□ -1.09
PDLIM1P1-201ENST00000604187 GOLT1BQ9Y3E0 138 aa8.25□□□□□ -1.09
PDLIM1P1-201ENST00000604187 LINC00588Q9Y4M8 146 aa8.25□□□□□ -1.09
PDLIM1P1-201ENST00000604187 U3KQE9 123 aa8.25□□□□□ -1.09
PDLIM1P1-201ENST00000604187 GPR31O00270 319 aa8.24□□□□□ -1.09
PDLIM1P1-201ENST00000604187 HNRNPCP07910 306 aaKnown RBP eCLIP8.24□□□□□ -1.09
PDLIM1P1-201ENST00000604187 OPRK1P41145 380 aa8.24□□□□□ -1.09
PDLIM1P1-201ENST00000604187 NKX2-1P43699 371 aaPredicted RBP8.24□□□□□ -1.09
PDLIM1P1-201ENST00000604187 RFX2P48378 723 aa8.24□□□□□ -1.09
PDLIM1P1-201ENST00000604187 ALDH3B2P48448 385 aa8.24□□□□□ -1.09
PDLIM1P1-201ENST00000604187 IZUMO4Q1ZYL8 232 aa8.24□□□□□ -1.09
PDLIM1P1-201ENST00000604187 PHLDA2Q53GA4 152 aa8.24□□□□□ -1.09
PDLIM1P1-201ENST00000604187 PRSS48Q7RTY5 328 aa8.24□□□□□ -1.09
PDLIM1P1-201ENST00000604187 SLC35G3Q8N808 338 aa8.24□□□□□ -1.09
PDLIM1P1-201ENST00000604187 OR4X1Q8NH49 305 aa8.24□□□□□ -1.09
PDLIM1P1-201ENST00000604187 MRGPRFQ96AM1 343 aa8.24□□□□□ -1.09
PDLIM1P1-201ENST00000604187 SLC25A38Q96DW6 304 aa8.24□□□□□ -1.09
PDLIM1P1-201ENST00000604187 C18orf15Q96N68 181 aa8.24□□□□□ -1.09
PDLIM1P1-201ENST00000604187 FXYD6Q9H0Q3 95 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms