RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 LY6LH3BQJ8 138 aa9.4□□□□□ -0.9
VRK3-223ENST00000601341 RRHO14718 337 aa9.4□□□□□ -0.9
VRK3-223ENST00000601341 GGCTO75223 188 aaKnown RBP9.4□□□□□ -0.9
VRK3-223ENST00000601341 YIF1AO95070 293 aa9.4□□□□□ -0.9
VRK3-223ENST00000601341 MT-CO2P00403 227 aa9.4□□□□□ -0.9
VRK3-223ENST00000601341 MC5RP33032 325 aa9.4□□□□□ -0.9
VRK3-223ENST00000601341 LGALS4P56470 323 aa9.4□□□□□ -0.9
VRK3-223ENST00000601341 NDUFA6P56556 154 aa9.4□□□□□ -0.9
VRK3-223ENST00000601341 C16orf82Q7Z2V1 217 aa9.4□□□□□ -0.9
VRK3-223ENST00000601341 OR5B3Q8NH48 314 aa9.4□□□□□ -0.9
VRK3-223ENST00000601341 ABHD5Q8WTS1 349 aa9.4□□□□□ -0.9
VRK3-223ENST00000601341 RPUSD4Q96CM3 377 aaKnown RBP9.4□□□□□ -0.9
VRK3-223ENST00000601341 MGST2Q99735 147 aa9.4□□□□□ -0.9
VRK3-223ENST00000601341 GSN-AS1Q9NRJ2 163 aa9.4□□□□□ -0.9
VRK3-223ENST00000601341 SLC35D1Q9NTN3 355 aa9.4□□□□□ -0.9
VRK3-223ENST00000601341 HIF1ANQ9NWT6 349 aa9.4□□□□□ -0.9
VRK3-223ENST00000601341 PXMP4Q9Y6I8 212 aa9.4□□□□□ -0.9
VRK3-223ENST00000601341 WNK2Q9Y3S1 2297 aa9.4□□□□□ -0.91
VRK3-223ENST00000601341 PPP5D1E7EU14 171 aa9.4□□□□□ -0.91
VRK3-223ENST00000601341 H0YJW9 148 aa9.4□□□□□ -0.91
VRK3-223ENST00000601341 TRGC1P0CF51 173 aa9.4□□□□□ -0.91
VRK3-223ENST00000601341 GALR1P47211 349 aa9.4□□□□□ -0.91
VRK3-223ENST00000601341 RHOBP62745 196 aa9.4□□□□□ -0.91
VRK3-223ENST00000601341 TPTE2P1Q5T6R2 138 aa9.4□□□□□ -0.91
VRK3-223ENST00000601341 MINOS1Q5TGZ0 78 aa9.4□□□□□ -0.91
VRK3-223ENST00000601341 KCNIP4Q6PIL6 250 aa9.4□□□□□ -0.91
VRK3-223ENST00000601341 SSX9Q7RTT3 188 aa9.4□□□□□ -0.91
VRK3-223ENST00000601341 SLC16A13Q7RTY0 426 aa9.4□□□□□ -0.91
VRK3-223ENST00000601341 HIST3H2BBQ8N257 126 aa9.4□□□□□ -0.91
VRK3-223ENST00000601341 TMEM170AQ8WVE7 144 aa9.4□□□□□ -0.91
VRK3-223ENST00000601341 C7orf69Q9H7B7 122 aa9.4□□□□□ -0.91
VRK3-223ENST00000601341 BET1LQ9NYM9 111 aa9.4□□□□□ -0.91
VRK3-223ENST00000601341 LY96Q9Y6Y9 160 aa9.4□□□□□ -0.91
VRK3-223ENST00000601341 MINOS1-NBL1R4GNA1 71 aa9.4□□□□□ -0.91
VRK3-223ENST00000601341 IGHV1-3A0A0C4DH29 117 aa9.39□□□□□ -0.91
VRK3-223ENST00000601341 IFITM10A6NMD0 228 aa9.39□□□□□ -0.91
VRK3-223ENST00000601341 PRCDQ00LT1 54 aa9.39□□□□□ -0.91
VRK3-223ENST00000601341 SPINK9Q5DT21 86 aa9.39□□□□□ -0.91
VRK3-223ENST00000601341 SPNS3Q6ZMD2 512 aa9.39□□□□□ -0.91
VRK3-223ENST00000601341 PDPNQ86YL7 162 aa9.39□□□□□ -0.91
VRK3-223ENST00000601341 MAPK1IP1LQ8NDC0 245 aa9.39□□□□□ -0.91
VRK3-223ENST00000601341 OSR1Q8TAX0 266 aaPredicted RBP9.39□□□□□ -0.91
VRK3-223ENST00000601341 FRZBQ92765 325 aa9.39□□□□□ -0.91
VRK3-223ENST00000601341 ACY3Q96HD9 319 aa9.39□□□□□ -0.91
VRK3-223ENST00000601341 WASHC3Q9Y3C0 194 aa9.39□□□□□ -0.91
VRK3-223ENST00000601341 TBL2Q9Y4P3 447 aaKnown RBP9.39□□□□□ -0.91
VRK3-223ENST00000601341 DMRT1Q9Y5R6 373 aa9.39□□□□□ -0.91
VRK3-223ENST00000601341 SETXQ7Z333 2677 aaKnown RBP9.38□□□□□ -0.91
VRK3-223ENST00000601341 TRAV9-1A0A075B6T8 112 aa9.38□□□□□ -0.91
VRK3-223ENST00000601341 A0A1W2PRD5 423 aa9.38□□□□□ -0.91
VRK3-223ENST00000601341 A0A1W2PRF3 423 aa9.38□□□□□ -0.91
VRK3-223ENST00000601341 A0A1W2PRM7 423 aa9.38□□□□□ -0.91
VRK3-223ENST00000601341 OOSP1A8MZH6 123 aa9.38□□□□□ -0.91
VRK3-223ENST00000601341 UPK2O00526 184 aa9.38□□□□□ -0.91
VRK3-223ENST00000601341 HMGB3O15347 200 aaKnown RBP9.38□□□□□ -0.91
VRK3-223ENST00000601341 IGKV1-16P04430 117 aa9.38□□□□□ -0.91
VRK3-223ENST00000601341 AREGP15514 252 aa9.38□□□□□ -0.91
VRK3-223ENST00000601341 PRR20EP86478 221 aa9.38□□□□□ -0.91
VRK3-223ENST00000601341 PRR20CP86479 221 aa9.38□□□□□ -0.91
VRK3-223ENST00000601341 PRR20DP86480 221 aa9.38□□□□□ -0.91
VRK3-223ENST00000601341 PRR20BP86481 221 aa9.38□□□□□ -0.91
VRK3-223ENST00000601341 PRR20AP86496 221 aa9.38□□□□□ -0.91
VRK3-223ENST00000601341 FOXL1Q12952 345 aa9.38□□□□□ -0.91
VRK3-223ENST00000601341 C2orf83Q53S99 150 aa9.38□□□□□ -0.91
VRK3-223ENST00000601341 LDLRAD2Q5SZI1 272 aa9.38□□□□□ -0.91
VRK3-223ENST00000601341 CCDC144NLQ6NUI1 221 aa9.38□□□□□ -0.91
VRK3-223ENST00000601341 MOB3BQ86TA1 216 aa9.38□□□□□ -0.91
VRK3-223ENST00000601341 LINC01551Q86U37 167 aa9.38□□□□□ -0.91
VRK3-223ENST00000601341 WFDC11Q8NEX6 87 aa9.38□□□□□ -0.91
VRK3-223ENST00000601341 OR4C13Q8NGP0 309 aa9.38□□□□□ -0.91
VRK3-223ENST00000601341 FLYWCH2Q96CP2 140 aaKnown RBP9.38□□□□□ -0.91
VRK3-223ENST00000601341 ITPR2Q14571 2701 aa9.38□□□□□ -0.91
VRK3-223ENST00000601341 TET2Q6N021 2002 aaPredicted RBP9.38□□□□□ -0.91
VRK3-223ENST00000601341 ABCA2Q9BZC7 2435 aa9.38□□□□□ -0.91
VRK3-223ENST00000601341 CCDC168Q8NDH2 2452 aa9.38□□□□□ -0.91
VRK3-223ENST00000601341 TRAV3A0A0B4J244 114 aa9.37□□□□□ -0.91
VRK3-223ENST00000601341 CENPVL3A0A0U1RRI6 287 aa9.37□□□□□ -0.91
VRK3-223ENST00000601341 J3QLI3 93 aa9.37□□□□□ -0.91
VRK3-223ENST00000601341 TGFAP01135 160 aa9.37□□□□□ -0.91
VRK3-223ENST00000601341 TMEM177Q53S58 311 aa9.37□□□□□ -0.91
VRK3-223ENST00000601341 ARSJQ5FYB0 599 aaPredicted RBP9.37□□□□□ -0.91
VRK3-223ENST00000601341 TMEM144Q7Z5S9 345 aa9.37□□□□□ -0.91
VRK3-223ENST00000601341 LHFPL4Q7Z7J7 247 aa9.37□□□□□ -0.91
VRK3-223ENST00000601341 VKORC1L1Q8N0U8 176 aa9.37□□□□□ -0.91
VRK3-223ENST00000601341 OR1L8Q8NGR8 309 aa9.37□□□□□ -0.91
VRK3-223ENST00000601341 OR2T10Q8NGZ9 312 aa9.37□□□□□ -0.91
VRK3-223ENST00000601341 OR4A5Q8NH83 315 aa9.37□□□□□ -0.91
VRK3-223ENST00000601341 RNASEH2CQ8TDP1 164 aaKnown RBP9.37□□□□□ -0.91
VRK3-223ENST00000601341 CACNG8Q8WXS5 425 aa9.37□□□□□ -0.91
VRK3-223ENST00000601341 C11orf52Q96A22 123 aa9.37□□□□□ -0.91
VRK3-223ENST00000601341 SLC35E1Q96K37 410 aa9.37□□□□□ -0.91
VRK3-223ENST00000601341 PLEKHA3Q9HB20 300 aa9.37□□□□□ -0.91
VRK3-223ENST00000601341 HILPDAQ9Y5L2 63 aa9.37□□□□□ -0.91
VRK3-223ENST00000601341 OR51B2Q9Y5P1 312 aa9.37□□□□□ -0.91
VRK3-223ENST00000601341 CREBBPQ92793 2442 aa9.37□□□□□ -0.91
VRK3-223ENST00000601341 NPFFO15130 113 aa9.37□□□□□ -0.91
VRK3-223ENST00000601341 ARL14EPLP0DKL9 152 aa9.37□□□□□ -0.91
VRK3-223ENST00000601341 IGHV4-31P0DP07 118 aa9.37□□□□□ -0.91
VRK3-223ENST00000601341 NPPCP23582 126 aa9.37□□□□□ -0.91
VRK3-223ENST00000601341 GNB1P62873 340 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms