RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 SNAPC5O75971 98 aa7.35□□□□□ -1.23
HIF3A-219ENST00000600879 IFNA4P05014 189 aa7.35□□□□□ -1.23
HIF3A-219ENST00000600879 HOXB5P09067 269 aa7.35□□□□□ -1.23
HIF3A-219ENST00000600879 ATF4P18848 351 aaPredicted RBP7.35□□□□□ -1.23
HIF3A-219ENST00000600879 IZUMO4Q1ZYL8 232 aa7.35□□□□□ -1.23
HIF3A-219ENST00000600879 RBPMS2Q6ZRY4 209 aaKnown RBP7.35□□□□□ -1.23
HIF3A-219ENST00000600879 LYZL2Q7Z4W2 148 aa7.35□□□□□ -1.23
HIF3A-219ENST00000600879 MMD2Q8IY49 270 aa7.35□□□□□ -1.23
HIF3A-219ENST00000600879 LRTM2Q8N967 370 aa7.35□□□□□ -1.23
HIF3A-219ENST00000600879 NECAP1Q8NC96 275 aa7.35□□□□□ -1.23
HIF3A-219ENST00000600879 OR4A5Q8NH83 315 aa7.35□□□□□ -1.23
HIF3A-219ENST00000600879 LSM10Q969L4 123 aaKnown RBP7.35□□□□□ -1.23
HIF3A-219ENST00000600879 CCDC140Q96MF4 163 aa7.35□□□□□ -1.23
HIF3A-219ENST00000600879 PLA2G2EQ9NZK7 142 aa7.35□□□□□ -1.23
HIF3A-219ENST00000600879 SHPKQ9UHJ6 478 aa7.35□□□□□ -1.23
HIF3A-219ENST00000600879 FBXL7Q9UJT9 491 aa7.35□□□□□ -1.23
HIF3A-219ENST00000600879 ALG5Q9Y673 324 aa7.35□□□□□ -1.23
HIF3A-219ENST00000600879 A0A0B4J293 547 aa7.34□□□□□ -1.23
HIF3A-219ENST00000600879 IGHV3-35A0A0C4DH35 117 aa7.34□□□□□ -1.23
HIF3A-219ENST00000600879 C7orf66A4D0T2 115 aa7.34□□□□□ -1.23
HIF3A-219ENST00000600879 UBE2CO00762 179 aa7.34□□□□□ -1.23
HIF3A-219ENST00000600879 DEFB4AO15263 64 aa7.34□□□□□ -1.23
HIF3A-219ENST00000600879 SSNA1O43805 119 aa7.34□□□□□ -1.23
HIF3A-219ENST00000600879 ADAP1O75689 374 aa7.34□□□□□ -1.23
HIF3A-219ENST00000600879 ACTL6BO94805 426 aa7.34□□□□□ -1.23
HIF3A-219ENST00000600879 IFNA21P01568 189 aa7.34□□□□□ -1.23
HIF3A-219ENST00000600879 IL6RP08887 468 aaPredicted RBP7.34□□□□□ -1.23
HIF3A-219ENST00000600879 OR2B8PP59922 312 aa7.34□□□□□ -1.23
HIF3A-219ENST00000600879 RPL8P62917 257 aaKnown RBP7.34□□□□□ -1.23
HIF3A-219ENST00000600879 FAM106AQ4KMX7 169 aa7.34□□□□□ -1.23
HIF3A-219ENST00000600879 GGNBP1Q5YKI7 109 aa7.34□□□□□ -1.23
HIF3A-219ENST00000600879 THOC7Q6I9Y2 204 aaKnown RBP7.34□□□□□ -1.23
HIF3A-219ENST00000600879 UNQ9165/PRO28630Q6UXU0 137 aa7.34□□□□□ -1.23
HIF3A-219ENST00000600879 ZNF575Q86XF7 245 aa7.34□□□□□ -1.23
HIF3A-219ENST00000600879 GPHB5Q86YW7 130 aa7.34□□□□□ -1.23
HIF3A-219ENST00000600879 FAM219AQ8IW50 185 aa7.34□□□□□ -1.23
HIF3A-219ENST00000600879 CADM3Q8N126 398 aa7.34□□□□□ -1.23
HIF3A-219ENST00000600879 OR2C3Q8N628 320 aa7.34□□□□□ -1.23
HIF3A-219ENST00000600879 OR5B3Q8NH48 314 aa7.34□□□□□ -1.23
HIF3A-219ENST00000600879 OR4A16Q8NH70 328 aa7.34□□□□□ -1.23
HIF3A-219ENST00000600879 C11orf45Q8TAV5 145 aa7.34□□□□□ -1.23
HIF3A-219ENST00000600879 C2CD4CQ8TF44 421 aa7.34□□□□□ -1.23
HIF3A-219ENST00000600879 GPR146Q96CH1 333 aa7.34□□□□□ -1.23
HIF3A-219ENST00000600879 ZNF430Q9H8G1 570 aaPredicted RBP7.34□□□□□ -1.23
HIF3A-219ENST00000600879 NSG2Q9Y328 171 aa7.34□□□□□ -1.23
HIF3A-219ENST00000600879 TMED3Q9Y3Q3 217 aa7.34□□□□□ -1.23
HIF3A-219ENST00000600879 C15orf61A6NNL5 157 aa7.33□□□□□ -1.24
HIF3A-219ENST00000600879 IGLL5B9A064 214 aa7.33□□□□□ -1.24
HIF3A-219ENST00000600879 CCSO14618 274 aa7.33□□□□□ -1.24
HIF3A-219ENST00000600879 P0C879 139 aa7.33□□□□□ -1.24
HIF3A-219ENST00000600879 SULT1A3P0DMM9 295 aa7.33□□□□□ -1.24
HIF3A-219ENST00000600879 SULT1A4P0DMN0 295 aa7.33□□□□□ -1.24
HIF3A-219ENST00000600879 MYOD1P15172 320 aa7.33□□□□□ -1.24
HIF3A-219ENST00000600879 HLA-GP17693 338 aa7.33□□□□□ -1.24
HIF3A-219ENST00000600879 MAS1LP35410 378 aa7.33□□□□□ -1.24
HIF3A-219ENST00000600879 RPL27AP46776 148 aaKnown RBP7.33□□□□□ -1.24
HIF3A-219ENST00000600879 NMSQ5H8A3 153 aa7.33□□□□□ -1.24
HIF3A-219ENST00000600879 TTC9CQ8N5M4 171 aa7.33□□□□□ -1.24
HIF3A-219ENST00000600879 SPIN2AQ99865 258 aa7.33□□□□□ -1.24
HIF3A-219ENST00000600879 SPIN2BQ9BPZ2 258 aa7.33□□□□□ -1.24
HIF3A-219ENST00000600879 COMMD5Q9GZQ3 224 aa7.33□□□□□ -1.24
HIF3A-219ENST00000600879 FKBP11Q9NYL4 201 aa7.33□□□□□ -1.24
HIF3A-219ENST00000600879 CACNG5Q9UF02 275 aa7.33□□□□□ -1.24
HIF3A-219ENST00000600879 PRNDQ9UKY0 176 aa7.33□□□□□ -1.24
HIF3A-219ENST00000600879 DNAH17Q9UFH2 4485 aa7.33□□□□□ -1.24
HIF3A-219ENST00000600879 MUC4Q99102 2169 aa7.33□□□□□ -1.24
HIF3A-219ENST00000600879 DNAH11Q96DT5 4516 aa7.32□□□□□ -1.24
HIF3A-219ENST00000600879 A0A1B0GU03 582 aa7.32□□□□□ -1.24
HIF3A-219ENST00000600879 PRSS29PA6NIE9 313 aa7.32□□□□□ -1.24
HIF3A-219ENST00000600879 DBX1A6NMT0 343 aa7.32□□□□□ -1.24
HIF3A-219ENST00000600879 A8MWP6 167 aa7.32□□□□□ -1.24
HIF3A-219ENST00000600879 FAM25EA8MYX2 175 aa7.32□□□□□ -1.24
HIF3A-219ENST00000600879 M0R2N4 97 aa7.32□□□□□ -1.24
HIF3A-219ENST00000600879 GOSR2O14653 212 aa7.32□□□□□ -1.24
HIF3A-219ENST00000600879 SMCO1Q147U7 214 aa7.32□□□□□ -1.24
HIF3A-219ENST00000600879 ZNF124Q15973 351 aa7.32□□□□□ -1.24
HIF3A-219ENST00000600879 ODF3L2Q3SX64 289 aa7.32□□□□□ -1.24
HIF3A-219ENST00000600879 FAM209BQ5JX69 171 aa7.32□□□□□ -1.24
HIF3A-219ENST00000600879 Q6ZRM9 215 aa7.32□□□□□ -1.24
HIF3A-219ENST00000600879 LINC00336Q6ZUF6 198 aa7.32□□□□□ -1.24
HIF3A-219ENST00000600879 APRG1Q8IVJ8 170 aa7.32□□□□□ -1.24
HIF3A-219ENST00000600879 OR1S1Q8NH92 325 aa7.32□□□□□ -1.24
HIF3A-219ENST00000600879 FYTTD1Q96QD9 318 aaKnown RBP7.32□□□□□ -1.24
HIF3A-219ENST00000600879 RARRES2Q99969 163 aa7.32□□□□□ -1.24
HIF3A-219ENST00000600879 PDCD10Q9BUL8 212 aa7.32□□□□□ -1.24
HIF3A-219ENST00000600879 HINT2Q9BX68 163 aa7.32□□□□□ -1.24
HIF3A-219ENST00000600879 QTRT1Q9BXR0 403 aaKnown RBP7.32□□□□□ -1.24
HIF3A-219ENST00000600879 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.32□□□□□ -1.24
HIF3A-219ENST00000600879 APLNQ9ULZ1 77 aa7.32□□□□□ -1.24
HIF3A-219ENST00000600879 OR51B2Q9Y5P1 312 aa7.32□□□□□ -1.24
HIF3A-219ENST00000600879 TRAV25A0A0B4J276 109 aa7.31□□□□□ -1.24
HIF3A-219ENST00000600879 KIR2DL5BA0A0G2JN68 375 aa7.31□□□□□ -1.24
HIF3A-219ENST00000600879 KIR2DL5BA0A0G2JPC4 375 aa7.31□□□□□ -1.24
HIF3A-219ENST00000600879 TEX50A0A1B0GTY4 177 aa7.31□□□□□ -1.24
HIF3A-219ENST00000600879 C5orf51A6NDU8 294 aa7.31□□□□□ -1.24
HIF3A-219ENST00000600879 MFSD2BA6NFX1 497 aa7.31□□□□□ -1.24
HIF3A-219ENST00000600879 TEX22C9J3V5 150 aa7.31□□□□□ -1.24
HIF3A-219ENST00000600879 ST8SIA3O43173 380 aa7.31□□□□□ -1.24
HIF3A-219ENST00000600879 NXPH3O95157 252 aa7.31□□□□□ -1.24
HIF3A-219ENST00000600879 IFNA17P01571 189 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms