RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	ZNF414	Q96IQ9	312 aa		10.9	□□□□□ -0.66
IRF3-223	ENST00000599223	HYLS1	Q96M11	299 aa		10.9	□□□□□ -0.66
IRF3-223	ENST00000599223	COMMD9	Q9P000	198 aa		10.9	□□□□□ -0.66
IRF3-223	ENST00000599223	IGHV3OR16-8	A0A075B7F1	116 aa		10.89	□□□□□ -0.67
IRF3-223	ENST00000599223	C5orf51	A6NDU8	294 aa		10.89	□□□□□ -0.67
IRF3-223	ENST00000599223	CXorf65	A6NEN9	183 aa		10.89	□□□□□ -0.67
IRF3-223	ENST00000599223		F8W735	103 aa	Predicted RBP	10.89	□□□□□ -0.67
IRF3-223	ENST00000599223	TGOLN2	O43493	480 aa		10.89	□□□□□ -0.67
IRF3-223	ENST00000599223	GNRHR	P30968	328 aa		10.89	□□□□□ -0.67
IRF3-223	ENST00000599223	FGL1	Q08830	312 aa		10.89	□□□□□ -0.67
IRF3-223	ENST00000599223	NOXA1	Q86UR1	476 aa		10.89	□□□□□ -0.67
IRF3-223	ENST00000599223	LGI3	Q8N145	548 aa		10.89	□□□□□ -0.67
IRF3-223	ENST00000599223	OR2T35	Q8NGX2	323 aa		10.89	□□□□□ -0.67
IRF3-223	ENST00000599223	MARC2	Q969Z3	335 aa		10.89	□□□□□ -0.67
IRF3-223	ENST00000599223	GALNT14	Q96FL9	552 aa		10.89	□□□□□ -0.67
IRF3-223	ENST00000599223	QTRT1	Q9BXR0	403 aa	Known RBP	10.89	□□□□□ -0.67
IRF3-223	ENST00000599223	IGHV3-21	A0A0B4J1V1	117 aa		10.88	□□□□□ -0.67
IRF3-223	ENST00000599223	TRAV25	A0A0B4J276	109 aa		10.88	□□□□□ -0.67
IRF3-223	ENST00000599223	C3orf85	A0A1B0GTC6	90 aa		10.88	□□□□□ -0.67
IRF3-223	ENST00000599223	OR2T8	A6NH00	312 aa		10.88	□□□□□ -0.67
IRF3-223	ENST00000599223	HPRT1	P00492	218 aa		10.88	□□□□□ -0.67
IRF3-223	ENST00000599223	NQO2	P16083	231 aa		10.88	□□□□□ -0.67
IRF3-223	ENST00000599223	SUPT4H1	P63272	117 aa	Known RBP	10.88	□□□□□ -0.67
IRF3-223	ENST00000599223	CATR1	Q13166	79 aa		10.88	□□□□□ -0.67
IRF3-223	ENST00000599223	ANKRD55	Q3KP44	614 aa		10.88	□□□□□ -0.67
IRF3-223	ENST00000599223	RBPMS2	Q6ZRY4	209 aa	Known RBP	10.88	□□□□□ -0.67
IRF3-223	ENST00000599223	TBC1D26	Q86UD7	250 aa		10.88	□□□□□ -0.67
IRF3-223	ENST00000599223	SPAG8	Q99932	426 aa	Predicted RBP	10.88	□□□□□ -0.67
IRF3-223	ENST00000599223	CHRDL1	Q9BU40	450 aa		10.88	□□□□□ -0.67
IRF3-223	ENST00000599223	COMMD5	Q9GZQ3	224 aa		10.88	□□□□□ -0.67
IRF3-223	ENST00000599223	MRPL27	Q9P0M9	148 aa	Known RBP	10.88	□□□□□ -0.67
IRF3-223	ENST00000599223	UFC1	Q9Y3C8	167 aa		10.88	□□□□□ -0.67
IRF3-223	ENST00000599223	LY6G6C	O95867	125 aa		10.87	□□□□□ -0.67
IRF3-223	ENST00000599223	OR5AC1	P0C628	307 aa		10.87	□□□□□ -0.67
IRF3-223	ENST00000599223	OR13C7	P0DN81	318 aa		10.87	□□□□□ -0.67
IRF3-223	ENST00000599223	C4BPB	P20851	252 aa		10.87	□□□□□ -0.67
IRF3-223	ENST00000599223	ELL	P55199	621 aa	Predicted RBP	10.87	□□□□□ -0.67
IRF3-223	ENST00000599223	WFDC3	Q8IUB2	231 aa		10.87	□□□□□ -0.67
IRF3-223	ENST00000599223	OR2C3	Q8N628	320 aa		10.87	□□□□□ -0.67
IRF3-223	ENST00000599223	DMBX1	Q8NFW5	382 aa		10.87	□□□□□ -0.67
IRF3-223	ENST00000599223	SRSF8	Q9BRL6	282 aa	Known RBP	10.87	□□□□□ -0.67
IRF3-223	ENST00000599223	PLEKHA2	Q9HB19	425 aa		10.87	□□□□□ -0.67
IRF3-223	ENST00000599223	VPS13D	Q5THJ4	4388 aa		10.87	□□□□□ -0.67
IRF3-223	ENST00000599223	TSPAN4	O14817	238 aa		10.86	□□□□□ -0.67
IRF3-223	ENST00000599223	ZNF207	O43670	478 aa	Known RBP	10.86	□□□□□ -0.67
IRF3-223	ENST00000599223	SIX6	O95475	246 aa		10.86	□□□□□ -0.67
IRF3-223	ENST00000599223	SERPINE2	P07093	398 aa		10.86	□□□□□ -0.67
IRF3-223	ENST00000599223	FGF2	P09038	288 aa		10.86	□□□□□ -0.67
IRF3-223	ENST00000599223	ADM	P35318	185 aa		10.86	□□□□□ -0.67
IRF3-223	ENST00000599223	TNFRSF9	Q07011	255 aa		10.86	□□□□□ -0.67
IRF3-223	ENST00000599223		Q6ZWC4	215 aa		10.86	□□□□□ -0.67
IRF3-223	ENST00000599223	VN1R17P	Q8TDU5	208 aa		10.86	□□□□□ -0.67
IRF3-223	ENST00000599223	DAZ1	Q9NQZ3	744 aa	Known RBP	10.86	□□□□□ -0.67
IRF3-223	ENST00000599223	TP53TG1	Q9Y2A0	90 aa		10.86	□□□□□ -0.67
IRF3-223	ENST00000599223	NSG2	Q9Y328	171 aa		10.86	□□□□□ -0.67
IRF3-223	ENST00000599223	DNAH6	Q9C0G6	4158 aa		10.85	□□□□□ -0.67
IRF3-223	ENST00000599223	TEX50	A0A1B0GTY4	177 aa		10.85	□□□□□ -0.67
IRF3-223	ENST00000599223	DUXB	A0A1W2PPF3	345 aa		10.85	□□□□□ -0.67
IRF3-223	ENST00000599223	NUPR2	A6NF83	97 aa		10.85	□□□□□ -0.67
IRF3-223	ENST00000599223	DBX1	A6NMT0	343 aa		10.85	□□□□□ -0.67
IRF3-223	ENST00000599223	MARCH11	A6NNE9	402 aa		10.85	□□□□□ -0.67
IRF3-223	ENST00000599223		K7EIM0	57 aa		10.85	□□□□□ -0.67
IRF3-223	ENST00000599223	SPRY2	O43597	315 aa		10.85	□□□□□ -0.67
IRF3-223	ENST00000599223	PGLYRP1	O75594	196 aa	Predicted RBP	10.85	□□□□□ -0.67
IRF3-223	ENST00000599223	ATG12	O94817	140 aa		10.85	□□□□□ -0.67
IRF3-223	ENST00000599223	HOXB5	P09067	269 aa		10.85	□□□□□ -0.67
IRF3-223	ENST00000599223	PET100	P0DJ07	73 aa		10.85	□□□□□ -0.67
IRF3-223	ENST00000599223	RPL35A	P18077	110 aa	Known RBP	10.85	□□□□□ -0.67
IRF3-223	ENST00000599223	F2R	P25116	425 aa		10.85	□□□□□ -0.67
IRF3-223	ENST00000599223	TMEM187	Q14656	261 aa		10.85	□□□□□ -0.67
IRF3-223	ENST00000599223	ZNF124	Q15973	351 aa		10.85	□□□□□ -0.67
IRF3-223	ENST00000599223	SP6	Q3SY56	376 aa		10.85	□□□□□ -0.67
IRF3-223	ENST00000599223	LRTM2	Q8N967	370 aa		10.85	□□□□□ -0.67
IRF3-223	ENST00000599223	AIFM2	Q9BRQ8	373 aa		10.85	□□□□□ -0.67
IRF3-223	ENST00000599223	TMEM222	Q9H0R3	208 aa		10.85	□□□□□ -0.67
IRF3-223	ENST00000599223	NDUFA4L2	Q9NRX3	87 aa		10.85	□□□□□ -0.67
IRF3-223	ENST00000599223	TMED3	Q9Y3Q3	217 aa		10.85	□□□□□ -0.67
IRF3-223	ENST00000599223	F11R	Q9Y624	299 aa	Known RBP	10.85	□□□□□ -0.67
IRF3-223	ENST00000599223	HECTD4	Q9Y4D8	3996 aa		10.84	□□□□□ -0.67
IRF3-223	ENST00000599223	CCS	O14618	274 aa		10.84	□□□□□ -0.67
IRF3-223	ENST00000599223	FCGR2B	P31994	310 aa	Predicted RBP	10.84	□□□□□ -0.67
IRF3-223	ENST00000599223	BMI1	P35226	326 aa		10.84	□□□□□ -0.67
IRF3-223	ENST00000599223	APOC4	P55056	127 aa		10.84	□□□□□ -0.67
IRF3-223	ENST00000599223	H2BFS	P57053	126 aa		10.84	□□□□□ -0.67
IRF3-223	ENST00000599223	SLC25A24	Q6NUK1	477 aa		10.84	□□□□□ -0.67
IRF3-223	ENST00000599223	RNASE11	Q8TAA1	199 aa	Known RBP	10.84	□□□□□ -0.67
IRF3-223	ENST00000599223	THAP6	Q8TBB0	222 aa		10.84	□□□□□ -0.67
IRF3-223	ENST00000599223	SCARB1	Q8WTV0	552 aa		10.84	□□□□□ -0.67
IRF3-223	ENST00000599223	IL22RA2	Q969J5	263 aa		10.84	□□□□□ -0.67
IRF3-223	ENST00000599223	BSCL2	Q96G97	398 aa	Predicted RBP	10.84	□□□□□ -0.67
IRF3-223	ENST00000599223	C2orf50	Q96LR7	162 aa		10.84	□□□□□ -0.67
IRF3-223	ENST00000599223	C20orf24	Q9BUV8	137 aa		10.84	□□□□□ -0.67
IRF3-223	ENST00000599223	HINT2	Q9BX68	163 aa		10.84	□□□□□ -0.67
IRF3-223	ENST00000599223	NMES1	Q9C002	83 aa		10.84	□□□□□ -0.67
IRF3-223	ENST00000599223	C21orf62	Q9NYP8	219 aa		10.84	□□□□□ -0.67
IRF3-223	ENST00000599223	THYN1	Q9P016	225 aa		10.84	□□□□□ -0.67
IRF3-223	ENST00000599223	SMLR1	H3BR10	107 aa		10.83	□□□□□ -0.68
IRF3-223	ENST00000599223	NDUFA4	O00483	81 aa		10.83	□□□□□ -0.68
IRF3-223	ENST00000599223	G6PC	P35575	357 aa		10.83	□□□□□ -0.68
IRF3-223	ENST00000599223	SMCO1	Q147U7	214 aa		10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms