RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 CCNKO75909 580 aa10.6□□□□□ -0.71
SHKBP1-218ENST00000598907 BRI3O95415 125 aa10.6□□□□□ -0.71
SHKBP1-218ENST00000598907 ELANEP08246 267 aa10.6□□□□□ -0.71
SHKBP1-218ENST00000598907 OR13C7P0DN81 318 aa10.6□□□□□ -0.71
SHKBP1-218ENST00000598907 HOXA1P49639 335 aaPredicted RBP10.6□□□□□ -0.71
SHKBP1-218ENST00000598907 UNQ5815/PRO19632Q6UWF5 114 aa10.6□□□□□ -0.71
SHKBP1-218ENST00000598907 ZNF114Q8NC26 417 aa10.6□□□□□ -0.71
SHKBP1-218ENST00000598907 ABHD5Q8WTS1 349 aa10.6□□□□□ -0.71
SHKBP1-218ENST00000598907 CIB3Q96Q77 187 aaPredicted RBP10.6□□□□□ -0.71
SHKBP1-218ENST00000598907 NEURL2Q9BR09 285 aa10.6□□□□□ -0.71
SHKBP1-218ENST00000598907 GON7Q9BXV9 100 aa10.6□□□□□ -0.71
SHKBP1-218ENST00000598907 LSM5Q9Y4Y9 91 aaKnown RBP10.6□□□□□ -0.71
SHKBP1-218ENST00000598907 WSB1Q9Y6I7 421 aa10.6□□□□□ -0.71
SHKBP1-218ENST00000598907 WRBO00258 174 aa10.59□□□□□ -0.71
SHKBP1-218ENST00000598907 SSSCA1O60232 199 aa10.59□□□□□ -0.71
SHKBP1-218ENST00000598907 SOX15O60248 233 aa10.59□□□□□ -0.71
SHKBP1-218ENST00000598907 APELAP0DMC3 54 aa10.59□□□□□ -0.71
SHKBP1-218ENST00000598907 RNASE2P10153 161 aaKnown RBP10.59□□□□□ -0.71
SHKBP1-218ENST00000598907 IAPPP10997 89 aa10.59□□□□□ -0.71
SHKBP1-218ENST00000598907 SLURP1P55000 103 aa10.59□□□□□ -0.71
SHKBP1-218ENST00000598907 ATP5IP56385 69 aaPredicted RBP10.59□□□□□ -0.71
SHKBP1-218ENST00000598907 S100A10P60903 97 aa10.59□□□□□ -0.71
SHKBP1-218ENST00000598907 ERHP84090 104 aaKnown RBP10.59□□□□□ -0.71
SHKBP1-218ENST00000598907 FGL1Q08830 312 aa10.59□□□□□ -0.71
SHKBP1-218ENST00000598907 PMS2P11Q13670 270 aa10.59□□□□□ -0.71
SHKBP1-218ENST00000598907 PRSS54Q6PEW0 395 aa10.59□□□□□ -0.71
SHKBP1-218ENST00000598907 AKAP14Q86UN6 197 aa10.59□□□□□ -0.71
SHKBP1-218ENST00000598907 TCTE3Q8IZS6 198 aa10.59□□□□□ -0.71
SHKBP1-218ENST00000598907 RNF152Q8N8N0 203 aa10.59□□□□□ -0.71
SHKBP1-218ENST00000598907 OR2T35Q8NGX2 323 aa10.59□□□□□ -0.71
SHKBP1-218ENST00000598907 TMEM170AQ8WVE7 144 aa10.59□□□□□ -0.71
SHKBP1-218ENST00000598907 HIPK2Q9H2X6 1198 aa10.59□□□□□ -0.71
SHKBP1-218ENST00000598907 ENY2Q9NPA8 101 aa10.59□□□□□ -0.71
SHKBP1-218ENST00000598907 HEYLQ9NQ87 328 aaPredicted RBP10.59□□□□□ -0.71
SHKBP1-218ENST00000598907 OR5AC2Q9NZP5 309 aa10.59□□□□□ -0.71
SHKBP1-218ENST00000598907 U3KQ87 197 aa10.59□□□□□ -0.71
SHKBP1-218ENST00000598907 TSC22D2O75157 780 aa10.58□□□□□ -0.72
SHKBP1-218ENST00000598907 IGLV1-40P01703 118 aa10.58□□□□□ -0.72
SHKBP1-218ENST00000598907 RLN2P04090 185 aa10.58□□□□□ -0.72
SHKBP1-218ENST00000598907 REG1AP05451 166 aa10.58□□□□□ -0.72
SHKBP1-218ENST00000598907 SLC25A4P12235 298 aa10.58□□□□□ -0.72
SHKBP1-218ENST00000598907 HTR2BP41595 481 aa10.58□□□□□ -0.72
SHKBP1-218ENST00000598907 MFAP2P55001 183 aa10.58□□□□□ -0.72
SHKBP1-218ENST00000598907 ECSCRQ19T08 205 aa10.58□□□□□ -0.72
SHKBP1-218ENST00000598907 LRRC37A5PQ49AS3 106 aa10.58□□□□□ -0.72
SHKBP1-218ENST00000598907 C2orf83Q53S99 150 aa10.58□□□□□ -0.72
SHKBP1-218ENST00000598907 DLX4Q92988 240 aaPredicted RBP10.58□□□□□ -0.72
SHKBP1-218ENST00000598907 PSENENQ9NZ42 101 aa10.58□□□□□ -0.72
SHKBP1-218ENST00000598907 DMRT1Q9Y5R6 373 aa10.58□□□□□ -0.72
SHKBP1-218ENST00000598907 F11RQ9Y624 299 aaKnown RBP10.58□□□□□ -0.72
SHKBP1-218ENST00000598907 C15orf62A8K5M9 175 aa10.57□□□□□ -0.72
SHKBP1-218ENST00000598907 A8MZ25 164 aa10.57□□□□□ -0.72
SHKBP1-218ENST00000598907 E5RGE8 158 aa10.57□□□□□ -0.72
SHKBP1-218ENST00000598907 IGHG4P01861 327 aa10.57□□□□□ -0.72
SHKBP1-218ENST00000598907 PET100P0DJ07 73 aa10.57□□□□□ -0.72
SHKBP1-218ENST00000598907 PVALBP20472 110 aaPredicted RBP10.57□□□□□ -0.72
SHKBP1-218ENST00000598907 CD300CQ08708 224 aa10.57□□□□□ -0.72
SHKBP1-218ENST00000598907 TMEM14EPQ6UXP3 125 aa10.57□□□□□ -0.72
SHKBP1-218ENST00000598907 C19orf35Q6ZS72 473 aa10.57□□□□□ -0.72
SHKBP1-218ENST00000598907 SLC24A4Q8NFF2 622 aa10.57□□□□□ -0.72
SHKBP1-218ENST00000598907 OR5T1Q8NG75 326 aa10.57□□□□□ -0.72
SHKBP1-218ENST00000598907 OR1P1Q8NH06 330 aa10.57□□□□□ -0.72
SHKBP1-218ENST00000598907 FANCD2OSQ96PS1 177 aa10.57□□□□□ -0.72
SHKBP1-218ENST00000598907 OR4C12Q96R67 309 aa10.57□□□□□ -0.72
SHKBP1-218ENST00000598907 LYRM2Q9NU23 88 aaPredicted RBP10.57□□□□□ -0.72
SHKBP1-218ENST00000598907 MBD2Q9UBB5 411 aa10.57□□□□□ -0.72
SHKBP1-218ENST00000598907 IGLV11-55A0A075B6I3 123 aa10.56□□□□□ -0.72
SHKBP1-218ENST00000598907 TRBV9A0A0B4J1U6 114 aa10.56□□□□□ -0.72
SHKBP1-218ENST00000598907 CXorf65A6NEN9 183 aa10.56□□□□□ -0.72
SHKBP1-218ENST00000598907 PMS2P5A8MQ11 134 aa10.56□□□□□ -0.72
SHKBP1-218ENST00000598907 SMLR1H3BR10 107 aa10.56□□□□□ -0.72
SHKBP1-218ENST00000598907 H3BUA1 57 aa10.56□□□□□ -0.72
SHKBP1-218ENST00000598907 I3L521 148 aa10.56□□□□□ -0.72
SHKBP1-218ENST00000598907 L7N2F9 121 aa10.56□□□□□ -0.72
SHKBP1-218ENST00000598907 NPY1RP25929 384 aa10.56□□□□□ -0.72
SHKBP1-218ENST00000598907 SNCAP37840 140 aa10.56□□□□□ -0.72
SHKBP1-218ENST00000598907 P2RY1P47900 373 aa10.56□□□□□ -0.72
SHKBP1-218ENST00000598907 VAMP2P63027 116 aa10.56□□□□□ -0.72
SHKBP1-218ENST00000598907 TMEM65Q6PI78 240 aa10.56□□□□□ -0.72
SHKBP1-218ENST00000598907 OR1L6Q8NGR2 347 aa10.56□□□□□ -0.72
SHKBP1-218ENST00000598907 THAP6Q8TBB0 222 aa10.56□□□□□ -0.72
SHKBP1-218ENST00000598907 TUBA4BQ9H853 241 aa10.56□□□□□ -0.72
SHKBP1-218ENST00000598907 FAM24AA6NFZ4 105 aa10.55□□□□□ -0.72
SHKBP1-218ENST00000598907 IFNA10P01566 189 aa10.55□□□□□ -0.72
SHKBP1-218ENST00000598907 PSMB8P28062 276 aa10.55□□□□□ -0.72
SHKBP1-218ENST00000598907 SUB1P53999 127 aaKnown RBP eCLIP10.55□□□□□ -0.72
SHKBP1-218ENST00000598907 RPP30P78346 268 aaKnown RBP10.55□□□□□ -0.72
SHKBP1-218ENST00000598907 SPANXN5Q5MJ07 72 aa10.55□□□□□ -0.72
SHKBP1-218ENST00000598907 OR11H4Q8NGC9 324 aa10.55□□□□□ -0.72
SHKBP1-218ENST00000598907 KLK15Q9H2R5 256 aa10.55□□□□□ -0.72
SHKBP1-218ENST00000598907 STRAPQ9Y3F4 350 aaKnown RBP10.55□□□□□ -0.72
SHKBP1-218ENST00000598907 IGSF23A1L1A6 192 aa10.54□□□□□ -0.72
SHKBP1-218ENST00000598907 PRSS46E5RG02 174 aa10.54□□□□□ -0.72
SHKBP1-218ENST00000598907 H3BP45 60 aa10.54□□□□□ -0.72
SHKBP1-218ENST00000598907 C1QBP02746 253 aa10.54□□□□□ -0.72
SHKBP1-218ENST00000598907 PRH1P02810 166 aa10.54□□□□□ -0.72
SHKBP1-218ENST00000598907 HIST1H1BP16401 226 aaKnown RBP10.54□□□□□ -0.72
SHKBP1-218ENST00000598907 ACSM6Q6P461 480 aa10.54□□□□□ -0.72
SHKBP1-218ENST00000598907 NOXA1Q86UR1 476 aa10.54□□□□□ -0.72
SHKBP1-218ENST00000598907 TMEM252Q8N6L7 170 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms