RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 ENKURQ8TC29 256 aa12.5□□□□□ -0.41
PNKP-210ENST00000597965 GPX8Q8TED1 209 aa12.5□□□□□ -0.41
PNKP-210ENST00000597965 MISP3Q96FF7 219 aa12.5□□□□□ -0.41
PNKP-210ENST00000597965 TMEM231Q9H6L2 316 aa12.5□□□□□ -0.41
PNKP-210ENST00000597965 FBXL17Q9UF56 701 aa12.5□□□□□ -0.41
PNKP-210ENST00000597965 KMT2AQ03164 3969 aa12.49□□□□□ -0.41
PNKP-210ENST00000597965 FAM240BA0A1B0GVZ2 78 aa12.49□□□□□ -0.41
PNKP-210ENST00000597965 ANKRD20A5PA0PJZ0 165 aa12.49□□□□□ -0.41
PNKP-210ENST00000597965 C11orf94C9JXX5 98 aa12.49□□□□□ -0.41
PNKP-210ENST00000597965 PFDN1O60925 122 aa12.49□□□□□ -0.41
PNKP-210ENST00000597965 DEDDO75618 318 aa12.49□□□□□ -0.41
PNKP-210ENST00000597965 BTCP35070 178 aa12.49□□□□□ -0.41
PNKP-210ENST00000597965 ERHP84090 104 aaKnown RBP12.49□□□□□ -0.41
PNKP-210ENST00000597965 TMEM187Q14656 261 aa12.49□□□□□ -0.41
PNKP-210ENST00000597965 TMEM41BQ5BJD5 291 aa12.49□□□□□ -0.41
PNKP-210ENST00000597965 H2BFWTQ7Z2G1 175 aa12.49□□□□□ -0.41
PNKP-210ENST00000597965 SCPEP1Q9HB40 452 aa12.49□□□□□ -0.41
PNKP-210ENST00000597965 IGKV3-7A0A075B6H7 116 aa12.48□□□□□ -0.41
PNKP-210ENST00000597965 TRAV2A0A0B4J234 112 aa12.48□□□□□ -0.41
PNKP-210ENST00000597965 CENPXA8MT69 81 aa12.48□□□□□ -0.41
PNKP-210ENST00000597965 I3L2K1 104 aa12.48□□□□□ -0.41
PNKP-210ENST00000597965 DNASE2O00115 360 aaPredicted RBP12.48□□□□□ -0.41
PNKP-210ENST00000597965 SCGB2A1O75556 95 aa12.48□□□□□ -0.41
PNKP-210ENST00000597965 CA1P00915 261 aaPredicted RBP12.48□□□□□ -0.41
PNKP-210ENST00000597965 PMP2P02689 132 aa12.48□□□□□ -0.41
PNKP-210ENST00000597965 NPBWR1P48145 328 aa12.48□□□□□ -0.41
PNKP-210ENST00000597965 AP3S2P59780 193 aa12.48□□□□□ -0.41
PNKP-210ENST00000597965 SSBP1Q04837 148 aaKnown RBP12.48□□□□□ -0.41
PNKP-210ENST00000597965 FAM90A2PQ658T7 463 aa12.48□□□□□ -0.41
PNKP-210ENST00000597965 ANAPC10Q9UM13 185 aa12.48□□□□□ -0.41
PNKP-210ENST00000597965 NAP1L6A6NFF2 107 aa12.47□□□□□ -0.41
PNKP-210ENST00000597965 ST8SIA3O43173 380 aa12.47□□□□□ -0.41
PNKP-210ENST00000597965 MT-CO2P00403 227 aa12.47□□□□□ -0.41
PNKP-210ENST00000597965 NAT1P18440 290 aa12.47□□□□□ -0.41
PNKP-210ENST00000597965 NANOS2P60321 138 aaKnown RBP12.47□□□□□ -0.41
PNKP-210ENST00000597965 TSPAN5P62079 268 aa12.47□□□□□ -0.41
PNKP-210ENST00000597965 PRCDQ00LT1 54 aa12.47□□□□□ -0.41
PNKP-210ENST00000597965 TCF24Q7RTU0 167 aa12.47□□□□□ -0.41
PNKP-210ENST00000597965 CHAC2Q8WUX2 184 aa12.47□□□□□ -0.41
PNKP-210ENST00000597965 PPP1R14BQ96C90 147 aa12.47□□□□□ -0.41
PNKP-210ENST00000597965 MARVELD1Q9BSK0 173 aa12.47□□□□□ -0.41
PNKP-210ENST00000597965 HRH4Q9H3N8 390 aa12.47□□□□□ -0.41
PNKP-210ENST00000597965 A0A1W2PS18 150 aa12.46□□□□□ -0.41
PNKP-210ENST00000597965 RPL11P62913 178 aaKnown RBP12.46□□□□□ -0.41
PNKP-210ENST00000597965 ZNF124Q15973 351 aa12.46□□□□□ -0.41
PNKP-210ENST00000597965 STHQ8IWL8 128 aa12.46□□□□□ -0.41
PNKP-210ENST00000597965 GBGT1Q8N5D6 347 aa12.46□□□□□ -0.41
PNKP-210ENST00000597965 DEDD2Q8WXF8 326 aa12.46□□□□□ -0.41
PNKP-210ENST00000597965 PINX1Q96BK5 328 aaKnown RBP12.46□□□□□ -0.41
PNKP-210ENST00000597965 IGHV3-49A0A0A0MS15 119 aa12.45□□□□□ -0.42
PNKP-210ENST00000597965 CORTO00230 105 aa12.45□□□□□ -0.42
PNKP-210ENST00000597965 HRH1P35367 487 aa12.45□□□□□ -0.42
PNKP-210ENST00000597965 SNCAP37840 140 aa12.45□□□□□ -0.42
PNKP-210ENST00000597965 SUB1P53999 127 aaKnown RBP eCLIP12.45□□□□□ -0.42
PNKP-210ENST00000597965 HSPE1P61604 102 aaKnown RBP12.45□□□□□ -0.42
PNKP-210ENST00000597965 ZNF600Q6ZNG1 722 aa12.45□□□□□ -0.42
PNKP-210ENST00000597965 SEC22AQ96IW7 307 aa12.45□□□□□ -0.42
PNKP-210ENST00000597965 FXYD6Q9H0Q3 95 aa12.45□□□□□ -0.42
PNKP-210ENST00000597965 MS4A6AQ9H2W1 248 aa12.45□□□□□ -0.42
PNKP-210ENST00000597965 VSIRQ9H7M9 311 aa12.45□□□□□ -0.42
PNKP-210ENST00000597965 ATG12O94817 140 aa12.44□□□□□ -0.42
PNKP-210ENST00000597965 TCRBP04435 133 aa12.44□□□□□ -0.42
PNKP-210ENST00000597965 PHLDA2Q53GA4 152 aa12.44□□□□□ -0.42
PNKP-210ENST00000597965 TBC1D26Q86UD7 250 aa12.44□□□□□ -0.42
PNKP-210ENST00000597965 TMEM229BQ8NBD8 167 aa12.44□□□□□ -0.42
PNKP-210ENST00000597965 NARS2Q96I59 477 aaKnown RBP12.44□□□□□ -0.42
PNKP-210ENST00000597965 COPZ2Q9P299 210 aa12.44□□□□□ -0.42
PNKP-210ENST00000597965 A0A0B4J293 547 aa12.43□□□□□ -0.42
PNKP-210ENST00000597965 DBX1A6NMT0 343 aa12.43□□□□□ -0.42
PNKP-210ENST00000597965 INMT-MINDY4F8WBC2 141 aa12.43□□□□□ -0.42
PNKP-210ENST00000597965 CCR6P51684 374 aa12.43□□□□□ -0.42
PNKP-210ENST00000597965 UCP3P55916 312 aa12.43□□□□□ -0.42
PNKP-210ENST00000597965 DEFB131AP59861 70 aa12.43□□□□□ -0.42
PNKP-210ENST00000597965 MORN3Q6PF18 240 aaPredicted RBP12.43□□□□□ -0.42
PNKP-210ENST00000597965 TOMM20LQ6UXN7 152 aa12.43□□□□□ -0.42
PNKP-210ENST00000597965 ST8SIA2Q92186 375 aa12.43□□□□□ -0.42
PNKP-210ENST00000597965 ZNF414Q96IQ9 312 aa12.43□□□□□ -0.42
PNKP-210ENST00000597965 PDCD10Q9BUL8 212 aa12.43□□□□□ -0.42
PNKP-210ENST00000597965 KRTAP17-1Q9BYP8 105 aa12.43□□□□□ -0.42
PNKP-210ENST00000597965 IGHV3OR16-13A0A075B7E8 117 aa12.42□□□□□ -0.42
PNKP-210ENST00000597965 IGHV3-74A0A0B4J1X5 117 aa12.42□□□□□ -0.42
PNKP-210ENST00000597965 IGLL5B9A064 214 aa12.42□□□□□ -0.42
PNKP-210ENST00000597965 CD74P04233 296 aa12.42□□□□□ -0.42
PNKP-210ENST00000597965 AKAIN1P0CW23 69 aa12.42□□□□□ -0.42
PNKP-210ENST00000597965 SPP1P10451 314 aa12.42□□□□□ -0.42
PNKP-210ENST00000597965 MIFP14174 115 aa12.42□□□□□ -0.42
PNKP-210ENST00000597965 NPPCP23582 126 aa12.42□□□□□ -0.42
PNKP-210ENST00000597965 HLA-DMAP28067 261 aa12.42□□□□□ -0.42
PNKP-210ENST00000597965 RCVRNP35243 200 aa12.42□□□□□ -0.42
PNKP-210ENST00000597965 EIF2B2P49770 351 aaKnown RBP12.42□□□□□ -0.42
PNKP-210ENST00000597965 PUS1Q9Y606 427 aaKnown RBP eCLIP12.42□□□□□ -0.42
PNKP-210ENST00000597965 INS-IGF2F8WCM5 200 aa12.41□□□□□ -0.42
PNKP-210ENST00000597965 CD3DP04234 171 aa12.41□□□□□ -0.42
PNKP-210ENST00000597965 FAUP35544 74 aaKnown RBP12.41□□□□□ -0.42
PNKP-210ENST00000597965 TAS2R19P59542 299 aa12.41□□□□□ -0.42
PNKP-210ENST00000597965 LEMD1Q68G75 181 aa12.41□□□□□ -0.42
PNKP-210ENST00000597965 STEAP1BQ6NZ63 245 aa12.41□□□□□ -0.42
PNKP-210ENST00000597965 SLC35G3Q8N808 338 aa12.41□□□□□ -0.42
PNKP-210ENST00000597965 OR4C16Q8NGL9 310 aa12.41□□□□□ -0.42
PNKP-210ENST00000597965 MRGPRFQ96AM1 343 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms