RNA–Protein interactions for RNA: ENST00000597297.1

PDE4C-210, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-210ENST00000597297 SRSF8Q9BRL6 282 aaKnown RBP9.37□□□□□ -0.91
PDE4C-210ENST00000597297 SMDT1Q9H4I9 107 aa9.37□□□□□ -0.91
PDE4C-210ENST00000597297 SLC25A22Q9H936 323 aa9.37□□□□□ -0.91
PDE4C-210ENST00000597297 SEC14L6B5MCN3 397 aa9.36□□□□□ -0.91
PDE4C-210ENST00000597297 SCO1O75880 301 aa9.36□□□□□ -0.91
PDE4C-210ENST00000597297 CNIH1O95406 144 aa9.36□□□□□ -0.91
PDE4C-210ENST00000597297 BRS3P32247 399 aa9.36□□□□□ -0.91
PDE4C-210ENST00000597297 RPL29P47914 159 aaKnown RBP9.36□□□□□ -0.91
PDE4C-210ENST00000597297 CDC34P49427 236 aaPredicted RBP9.36□□□□□ -0.91
PDE4C-210ENST00000597297 PPT1P50897 306 aa9.36□□□□□ -0.91
PDE4C-210ENST00000597297 RIPPLY3P57055 190 aa9.36□□□□□ -0.91
PDE4C-210ENST00000597297 DEFA5Q01523 94 aa9.36□□□□□ -0.91
PDE4C-210ENST00000597297 MLANAQ16655 118 aa9.36□□□□□ -0.91
PDE4C-210ENST00000597297 HAGHQ16775 308 aa9.36□□□□□ -0.91
PDE4C-210ENST00000597297 ZNF506Q5JVG8 444 aa9.36□□□□□ -0.91
PDE4C-210ENST00000597297 PIP4P2Q8N4L2 257 aa9.36□□□□□ -0.91
PDE4C-210ENST00000597297 SSMEM1Q8WWF3 244 aa9.36□□□□□ -0.91
PDE4C-210ENST00000597297 RARRES2Q99969 163 aa9.36□□□□□ -0.91
PDE4C-210ENST00000597297 IGHV1-69DA0A0B4J2H0 117 aa9.35□□□□□ -0.91
PDE4C-210ENST00000597297 LOC102723971A0A1B0GUV8 181 aa9.35□□□□□ -0.91
PDE4C-210ENST00000597297 EIF3GO75821 320 aaKnown RBP eCLIP9.35□□□□□ -0.91
PDE4C-210ENST00000597297 IGHV1-69P01742 117 aa9.35□□□□□ -0.91
PDE4C-210ENST00000597297 FAM106CPP0CH98 169 aa9.35□□□□□ -0.91
PDE4C-210ENST00000597297 APELAP0DMC3 54 aa9.35□□□□□ -0.91
PDE4C-210ENST00000597297 B2MP61769 119 aa9.35□□□□□ -0.91
PDE4C-210ENST00000597297 PRR20EP86478 221 aa9.35□□□□□ -0.91
PDE4C-210ENST00000597297 PRR20CP86479 221 aa9.35□□□□□ -0.91
PDE4C-210ENST00000597297 PRR20DP86480 221 aa9.35□□□□□ -0.91
PDE4C-210ENST00000597297 PRR20BP86481 221 aa9.35□□□□□ -0.91
PDE4C-210ENST00000597297 PRR20AP86496 221 aa9.35□□□□□ -0.91
PDE4C-210ENST00000597297 GCSAMLQ5JQS6 135 aa9.35□□□□□ -0.91
PDE4C-210ENST00000597297 PRIMA1Q86XR5 153 aa9.35□□□□□ -0.91
PDE4C-210ENST00000597297 STPG3Q8N7X2 389 aa9.35□□□□□ -0.91
PDE4C-210ENST00000597297 OR1P1Q8NH06 330 aa9.35□□□□□ -0.91
PDE4C-210ENST00000597297 OR2T6Q8NHC8 308 aa9.35□□□□□ -0.91
PDE4C-210ENST00000597297 ABHD5Q8WTS1 349 aa9.35□□□□□ -0.91
PDE4C-210ENST00000597297 RAB24Q969Q5 203 aa9.35□□□□□ -0.91
PDE4C-210ENST00000597297 FNDC4Q9H6D8 234 aaPredicted RBP9.35□□□□□ -0.91
PDE4C-210ENST00000597297 GNG13Q9P2W3 67 aa9.35□□□□□ -0.91
PDE4C-210ENST00000597297 CDC42EP3Q9UKI2 254 aa9.35□□□□□ -0.91
PDE4C-210ENST00000597297 SLC45A2Q9UMX9 530 aa9.35□□□□□ -0.91
PDE4C-210ENST00000597297 F11RQ9Y624 299 aaKnown RBP9.35□□□□□ -0.91
PDE4C-210ENST00000597297 JMJD1CQ15652 2540 aa9.34□□□□□ -0.91
PDE4C-210ENST00000597297 IGKV1OR2-108A0A075B7D4 117 aa9.34□□□□□ -0.91
PDE4C-210ENST00000597297 CORTO00230 105 aa9.34□□□□□ -0.91
PDE4C-210ENST00000597297 IFNA1P01562 189 aa9.34□□□□□ -0.91
PDE4C-210ENST00000597297 OR10J1P30954 320 aa9.34□□□□□ -0.91
PDE4C-210ENST00000597297 MFAP2P55001 183 aa9.34□□□□□ -0.91
PDE4C-210ENST00000597297 ICAM4Q14773 271 aa9.34□□□□□ -0.91
PDE4C-210ENST00000597297 FXYD3Q14802 87 aa9.34□□□□□ -0.91
PDE4C-210ENST00000597297 GUCA2BQ16661 112 aa9.34□□□□□ -0.91
PDE4C-210ENST00000597297 KHDC3LQ587J8 217 aa9.34□□□□□ -0.91
PDE4C-210ENST00000597297 RUSC1-AS1Q66K80 236 aa9.34□□□□□ -0.91
PDE4C-210ENST00000597297 ETFRF1Q6IPR1 90 aa9.34□□□□□ -0.91
PDE4C-210ENST00000597297 C19orf35Q6ZS72 473 aa9.34□□□□□ -0.91
PDE4C-210ENST00000597297 SVBPQ8N300 66 aa9.34□□□□□ -0.91
PDE4C-210ENST00000597297 MISP3Q96FF7 219 aa9.34□□□□□ -0.91
PDE4C-210ENST00000597297 ACY3Q96HD9 319 aa9.34□□□□□ -0.91
PDE4C-210ENST00000597297 SLC35B3Q9H1N7 401 aa9.34□□□□□ -0.91
PDE4C-210ENST00000597297 C7orf69Q9H7B7 122 aa9.34□□□□□ -0.91
PDE4C-210ENST00000597297 IGHV3OR16-10A0A075B7F0 116 aa9.33□□□□□ -0.92
PDE4C-210ENST00000597297 TRAV40A0A0B4J280 105 aa9.33□□□□□ -0.92
PDE4C-210ENST00000597297 A0A1W2PPV4 95 aa9.33□□□□□ -0.92
PDE4C-210ENST00000597297 NCBP2LA6PVI3 153 aaKnown RBP9.33□□□□□ -0.92
PDE4C-210ENST00000597297 HMGB3O15347 200 aaKnown RBP9.33□□□□□ -0.92
PDE4C-210ENST00000597297 CRYGCP07315 174 aa9.33□□□□□ -0.92
PDE4C-210ENST00000597297 LINC00869P0C866 280 aa9.33□□□□□ -0.92
PDE4C-210ENST00000597297 BCL2P10415 239 aa9.33□□□□□ -0.92
PDE4C-210ENST00000597297 DEFA4P12838 97 aa9.33□□□□□ -0.92
PDE4C-210ENST00000597297 PMS2P11Q13670 270 aa9.33□□□□□ -0.92
PDE4C-210ENST00000597297 RXFP4Q8TDU9 374 aa9.33□□□□□ -0.92
PDE4C-210ENST00000597297 C1RLQ9NZP8 487 aa9.33□□□□□ -0.92
PDE4C-210ENST00000597297 MXRA5Q9NR99 2828 aa9.33□□□□□ -0.92
PDE4C-210ENST00000597297 ZFP92A6NM28 416 aa9.33□□□□□ -0.92
PDE4C-210ENST00000597297 HSPB1P04792 205 aaKnown RBP9.33□□□□□ -0.92
PDE4C-210ENST00000597297 SRP19P09132 144 aaKnown RBP9.33□□□□□ -0.92
PDE4C-210ENST00000597297 GATA3P23771 443 aa9.33□□□□□ -0.92
PDE4C-210ENST00000597297 ATRAIDQ6UW56 229 aa9.33□□□□□ -0.92
PDE4C-210ENST00000597297 ZNF562Q6V9R5 426 aa9.33□□□□□ -0.92
PDE4C-210ENST00000597297 THAP8Q8NA92 274 aa9.33□□□□□ -0.92
PDE4C-210ENST00000597297 NPIPB3Q92617 1050 aa9.33□□□□□ -0.92
PDE4C-210ENST00000597297 TSPAN9O75954 239 aa9.32□□□□□ -0.92
PDE4C-210ENST00000597297 CTRB1P17538 263 aa9.32□□□□□ -0.92
PDE4C-210ENST00000597297 SRD5A1P18405 259 aa9.32□□□□□ -0.92
PDE4C-210ENST00000597297 RND2P52198 227 aa9.32□□□□□ -0.92
PDE4C-210ENST00000597297 CX3CL1P78423 397 aa9.32□□□□□ -0.92
PDE4C-210ENST00000597297 CTRB2Q6GPI1 263 aa9.32□□□□□ -0.92
PDE4C-210ENST00000597297 RBMS3Q6XE24 437 aaKnown RBP9.32□□□□□ -0.92
PDE4C-210ENST00000597297 CYP2G1PQ6ZSU1 146 aa9.32□□□□□ -0.92
PDE4C-210ENST00000597297 Q8N9W7 124 aa9.32□□□□□ -0.92
PDE4C-210ENST00000597297 C22orf15Q8WYQ4 148 aa9.32□□□□□ -0.92
PDE4C-210ENST00000597297 ARPC1AQ92747 370 aa9.32□□□□□ -0.92
PDE4C-210ENST00000597297 FAM103A1Q9BTL3 118 aaKnown RBP9.32□□□□□ -0.92
PDE4C-210ENST00000597297 NKX6-2Q9C056 277 aaPredicted RBP9.32□□□□□ -0.92
PDE4C-210ENST00000597297 TMPRSS5Q9H3S3 457 aa9.32□□□□□ -0.92
PDE4C-210ENST00000597297 MRPL36Q9P0J6 103 aaKnown RBP9.32□□□□□ -0.92
PDE4C-210ENST00000597297 DMRT1Q9Y5R6 373 aa9.32□□□□□ -0.92
PDE4C-210ENST00000597297 IGKV1D-37A0A075B6S9 117 aa9.31□□□□□ -0.92
PDE4C-210ENST00000597297 TCRBV4S1A1TA0A5B7 111 aa9.31□□□□□ -0.92
PDE4C-210ENST00000597297 J3QLI3 93 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms