RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 TGOLN2O43493 480 aa11.03□□□□□ -0.64
VRK3-213ENST00000597215 IGHV3-48P01763 117 aa11.03□□□□□ -0.64
VRK3-213ENST00000597215 TAS2R30P59541 319 aa11.03□□□□□ -0.64
VRK3-213ENST00000597215 S100A10P60903 97 aa11.03□□□□□ -0.64
VRK3-213ENST00000597215 VAMP2P63027 116 aa11.03□□□□□ -0.64
VRK3-213ENST00000597215 IL15RAQ13261 267 aa11.03□□□□□ -0.64
VRK3-213ENST00000597215 SPSB3Q6PJ21 355 aa11.03□□□□□ -0.64
VRK3-213ENST00000597215 DCUN1D4Q92564 292 aa11.03□□□□□ -0.64
VRK3-213ENST00000597215 MED28Q9H204 178 aa11.03□□□□□ -0.64
VRK3-213ENST00000597215 FNDC4Q9H6D8 234 aaPredicted RBP11.03□□□□□ -0.64
VRK3-213ENST00000597215 PSENENQ9NZ42 101 aa11.03□□□□□ -0.64
VRK3-213ENST00000597215 F8W735 103 aaPredicted RBP11.02□□□□□ -0.65
VRK3-213ENST00000597215 OVOL1O14753 267 aa11.02□□□□□ -0.65
VRK3-213ENST00000597215 GNG7O60262 68 aa11.02□□□□□ -0.65
VRK3-213ENST00000597215 TSC22D2O75157 780 aa11.02□□□□□ -0.65
VRK3-213ENST00000597215 SLC25A4P12235 298 aa11.02□□□□□ -0.65
VRK3-213ENST00000597215 PVALBP20472 110 aaPredicted RBP11.02□□□□□ -0.65
VRK3-213ENST00000597215 NPBWR1P48145 328 aa11.02□□□□□ -0.65
VRK3-213ENST00000597215 H2BFSP57053 126 aa11.02□□□□□ -0.65
VRK3-213ENST00000597215 RAB32Q13637 225 aa11.02□□□□□ -0.65
VRK3-213ENST00000597215 KLF5Q13887 457 aaPredicted RBP11.02□□□□□ -0.65
VRK3-213ENST00000597215 DLX4Q92988 240 aaPredicted RBP11.02□□□□□ -0.65
VRK3-213ENST00000597215 RCC1LQ96I51 464 aaKnown RBP11.02□□□□□ -0.65
VRK3-213ENST00000597215 OR4C12Q96R67 309 aa11.02□□□□□ -0.65
VRK3-213ENST00000597215 MCRIP2Q9BUT9 160 aaKnown RBP11.02□□□□□ -0.65
VRK3-213ENST00000597215 ZC4H2Q9NQZ6 224 aa11.02□□□□□ -0.65
VRK3-213ENST00000597215 NUPL2O15504 423 aaKnown RBP11.01□□□□□ -0.65
VRK3-213ENST00000597215 SCGB2A1O75556 95 aa11.01□□□□□ -0.65
VRK3-213ENST00000597215 TMEM50AO95807 157 aa11.01□□□□□ -0.65
VRK3-213ENST00000597215 PAX9P55771 341 aa11.01□□□□□ -0.65
VRK3-213ENST00000597215 SYNJ2BPP57105 145 aa11.01□□□□□ -0.65
VRK3-213ENST00000597215 CD69Q07108 199 aa11.01□□□□□ -0.65
VRK3-213ENST00000597215 MLANAQ16655 118 aa11.01□□□□□ -0.65
VRK3-213ENST00000597215 SLC16A13Q7RTY0 426 aa11.01□□□□□ -0.65
VRK3-213ENST00000597215 C1QL4Q86Z23 238 aa11.01□□□□□ -0.65
VRK3-213ENST00000597215 OR4X1Q8NH49 305 aa11.01□□□□□ -0.65
VRK3-213ENST00000597215 CMYA5Q8N3K9 4069 aa11.01□□□□□ -0.65
VRK3-213ENST00000597215 NBEAL1Q6ZS30 2694 aa11□□□□□ -0.65
VRK3-213ENST00000597215 OR2C1O95371 312 aa11□□□□□ -0.65
VRK3-213ENST00000597215 GPX4P36969 197 aaPredicted RBP11□□□□□ -0.65
VRK3-213ENST00000597215 FCN2Q15485 313 aa11□□□□□ -0.65
VRK3-213ENST00000597215 FAM106AQ4KMX7 169 aa11□□□□□ -0.65
VRK3-213ENST00000597215 GPHB5Q86YW7 130 aa11□□□□□ -0.65
VRK3-213ENST00000597215 CACNG8Q8WXS5 425 aa11□□□□□ -0.65
VRK3-213ENST00000597215 CHRDL1Q9BU40 450 aa11□□□□□ -0.65
VRK3-213ENST00000597215 GPR61Q9BZJ8 451 aa11□□□□□ -0.65
VRK3-213ENST00000597215 PKD1L1Q8TDX9 2849 aa10.99□□□□□ -0.65
VRK3-213ENST00000597215 CLN5O75503 358 aa10.99□□□□□ -0.65
VRK3-213ENST00000597215 RLN2P04090 185 aa10.99□□□□□ -0.65
VRK3-213ENST00000597215 CTSGP08311 255 aa10.99□□□□□ -0.65
VRK3-213ENST00000597215 CXCL3P19876 107 aa10.99□□□□□ -0.65
VRK3-213ENST00000597215 BCAP31P51572 246 aa10.99□□□□□ -0.65
VRK3-213ENST00000597215 RND2P52198 227 aa10.99□□□□□ -0.65
VRK3-213ENST00000597215 RRAS2P62070 204 aaPredicted RBP10.99□□□□□ -0.65
VRK3-213ENST00000597215 RELQ04864 619 aaPredicted RBP10.99□□□□□ -0.65
VRK3-213ENST00000597215 LRRC37A5PQ49AS3 106 aa10.99□□□□□ -0.65
VRK3-213ENST00000597215 PRSS54Q6PEW0 395 aa10.99□□□□□ -0.65
VRK3-213ENST00000597215 TMEM14EPQ6UXP3 125 aa10.99□□□□□ -0.65
VRK3-213ENST00000597215 REC114Q7Z4M0 266 aa10.99□□□□□ -0.65
VRK3-213ENST00000597215 TMEM116Q8NCL8 245 aa10.99□□□□□ -0.65
VRK3-213ENST00000597215 OR11H7Q8NGC8 314 aa10.99□□□□□ -0.65
VRK3-213ENST00000597215 PPP1R1CQ8WVI7 109 aa10.99□□□□□ -0.65
VRK3-213ENST00000597215 ACY3Q96HD9 319 aa10.99□□□□□ -0.65
VRK3-213ENST00000597215 SLC35E1Q96K37 410 aa10.99□□□□□ -0.65
VRK3-213ENST00000597215 ELOVL1Q9BW60 279 aa10.99□□□□□ -0.65
VRK3-213ENST00000597215 C11orf1Q9H5F2 150 aa10.99□□□□□ -0.65
VRK3-213ENST00000597215 MRPL36Q9P0J6 103 aaKnown RBP10.99□□□□□ -0.65
VRK3-213ENST00000597215 PEMTQ9UBM1 199 aa10.99□□□□□ -0.65
VRK3-213ENST00000597215 TRAV30A0A087WSZ9 112 aa10.98□□□□□ -0.65
VRK3-213ENST00000597215 SEC14L6B5MCN3 397 aa10.98□□□□□ -0.65
VRK3-213ENST00000597215 PRSS46E5RG02 174 aa10.98□□□□□ -0.65
VRK3-213ENST00000597215 LGALS9O00182 355 aa10.98□□□□□ -0.65
VRK3-213ENST00000597215 DEDDO75618 318 aa10.98□□□□□ -0.65
VRK3-213ENST00000597215 SCAF4O95104 1147 aaKnown RBP10.98□□□□□ -0.65
VRK3-213ENST00000597215 METTL15P1P0C7V9 234 aa10.98□□□□□ -0.65
VRK3-213ENST00000597215 PET100P0DJ07 73 aa10.98□□□□□ -0.65
VRK3-213ENST00000597215 IGLL1P15814 213 aa10.98□□□□□ -0.65
VRK3-213ENST00000597215 ADMP35318 185 aa10.98□□□□□ -0.65
VRK3-213ENST00000597215 CAV2P51636 162 aa10.98□□□□□ -0.65
VRK3-213ENST00000597215 OR8G2PQ6IF36 304 aa10.98□□□□□ -0.65
VRK3-213ENST00000597215 OR9G4Q8NGQ1 327 aa10.98□□□□□ -0.65
VRK3-213ENST00000597215 NPIPB3Q92617 1050 aa10.98□□□□□ -0.65
VRK3-213ENST00000597215 ZNF436Q9C0F3 470 aaPredicted RBP10.98□□□□□ -0.65
VRK3-213ENST00000597215 NOTCH3Q9UM47 2321 aa10.97□□□□□ -0.65
VRK3-213ENST00000597215 MGAM2Q2M2H8 2515 aa10.97□□□□□ -0.65
VRK3-213ENST00000597215 IGHV3-35A0A0C4DH35 117 aa10.97□□□□□ -0.65
VRK3-213ENST00000597215 ZNF320A2RRD8 509 aa10.97□□□□□ -0.65
VRK3-213ENST00000597215 NDUFA4O00483 81 aa10.97□□□□□ -0.65
VRK3-213ENST00000597215 OR10J1P30954 320 aa10.97□□□□□ -0.65
VRK3-213ENST00000597215 GAMTQ14353 236 aa10.97□□□□□ -0.65
VRK3-213ENST00000597215 C9orf66Q5T8R8 295 aa10.97□□□□□ -0.65
VRK3-213ENST00000597215 OR10P1Q8NGE3 313 aa10.97□□□□□ -0.65
VRK3-213ENST00000597215 OR1S2Q8NGQ3 325 aa10.97□□□□□ -0.65
VRK3-213ENST00000597215 ASB13Q8WXK3 278 aa10.97□□□□□ -0.65
VRK3-213ENST00000597215 WDR89Q96FK6 387 aaPredicted RBP10.97□□□□□ -0.65
VRK3-213ENST00000597215 LYRM2Q9NU23 88 aaPredicted RBP10.97□□□□□ -0.65
VRK3-213ENST00000597215 PMS2P5A8MQ11 134 aa10.96□□□□□ -0.65
VRK3-213ENST00000597215 E5RGE8 158 aa10.96□□□□□ -0.65
VRK3-213ENST00000597215 CCNKO75909 580 aa10.96□□□□□ -0.65
VRK3-213ENST00000597215 MPC2O95563 127 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms