RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 CBLN1P23435 193 aa13.84□□□□□ -0.19
ZNF558-204ENST00000596172 IFITM3Q01628 133 aa13.84□□□□□ -0.19
ZNF558-204ENST00000596172 RELQ04864 619 aaPredicted RBP13.84□□□□□ -0.19
ZNF558-204ENST00000596172 UNQ9165/PRO28630Q6UXU0 137 aa13.84□□□□□ -0.19
ZNF558-204ENST00000596172 TMEM170AQ8WVE7 144 aa13.84□□□□□ -0.19
ZNF558-204ENST00000596172 TMEM190Q8WZ59 177 aa13.84□□□□□ -0.19
ZNF558-204ENST00000596172 FNDC4Q9H6D8 234 aaPredicted RBP13.84□□□□□ -0.19
ZNF558-204ENST00000596172 LSM4Q9Y4Z0 139 aaKnown RBP13.84□□□□□ -0.19
ZNF558-204ENST00000596172 RPS10-NUDT3A0A1W2PQS6 291 aa13.83□□□□□ -0.2
ZNF558-204ENST00000596172 GNG7O60262 68 aa13.83□□□□□ -0.2
ZNF558-204ENST00000596172 MED6O75586 246 aa13.83□□□□□ -0.2
ZNF558-204ENST00000596172 IFNA21P01568 189 aa13.83□□□□□ -0.2
ZNF558-204ENST00000596172 IGHV3-48P01763 117 aa13.83□□□□□ -0.2
ZNF558-204ENST00000596172 GP9P14770 177 aa13.83□□□□□ -0.2
ZNF558-204ENST00000596172 NPY1RP25929 384 aa13.83□□□□□ -0.2
ZNF558-204ENST00000596172 DEFB114Q30KQ6 69 aa13.83□□□□□ -0.2
ZNF558-204ENST00000596172 LCN12Q6JVE5 192 aa13.83□□□□□ -0.2
ZNF558-204ENST00000596172 HAPLN4Q86UW8 402 aa13.83□□□□□ -0.2
ZNF558-204ENST00000596172 OR4X1Q8NH49 305 aa13.83□□□□□ -0.2
ZNF558-204ENST00000596172 TRAV6A0A075B6T7 132 aa13.82□□□□□ -0.2
ZNF558-204ENST00000596172 IGHV3-35A0A0C4DH35 117 aa13.82□□□□□ -0.2
ZNF558-204ENST00000596172 K7EMT4 169 aa13.82□□□□□ -0.2
ZNF558-204ENST00000596172 ADAP1O75689 374 aa13.82□□□□□ -0.2
ZNF558-204ENST00000596172 LY86O95711 162 aa13.82□□□□□ -0.2
ZNF558-204ENST00000596172 TMEM50AO95807 157 aa13.82□□□□□ -0.2
ZNF558-204ENST00000596172 IFNA10P01566 189 aa13.82□□□□□ -0.2
ZNF558-204ENST00000596172 H2AFB2P0C5Z0 115 aa13.82□□□□□ -0.2
ZNF558-204ENST00000596172 SLC25A4P12235 298 aa13.82□□□□□ -0.2
ZNF558-204ENST00000596172 OPRK1P41145 380 aa13.82□□□□□ -0.2
ZNF558-204ENST00000596172 TM4SF20Q53R12 229 aa13.82□□□□□ -0.2
ZNF558-204ENST00000596172 DEFB121Q5J5C9 76 aa13.82□□□□□ -0.2
ZNF558-204ENST00000596172 ZNF414Q96IQ9 312 aa13.82□□□□□ -0.2
ZNF558-204ENST00000596172 MRPL27Q9P0M9 148 aaKnown RBP13.82□□□□□ -0.2
ZNF558-204ENST00000596172 TGP01266 2768 aa13.82□□□□□ -0.2
ZNF558-204ENST00000596172 SORL1Q92673 2214 aa13.82□□□□□ -0.2
ZNF558-204ENST00000596172 C15orf62A8K5M9 175 aa13.81□□□□□ -0.2
ZNF558-204ENST00000596172 CLN5O75503 358 aa13.81□□□□□ -0.2
ZNF558-204ENST00000596172 ID3Q02535 119 aa13.81□□□□□ -0.2
ZNF558-204ENST00000596172 MLANAQ16655 118 aa13.81□□□□□ -0.2
ZNF558-204ENST00000596172 ETFRF1Q6IPR1 90 aa13.81□□□□□ -0.2
ZNF558-204ENST00000596172 UXS1Q8NBZ7 420 aa13.81□□□□□ -0.2
ZNF558-204ENST00000596172 CIB3Q96Q77 187 aaPredicted RBP13.81□□□□□ -0.2
ZNF558-204ENST00000596172 DAZ1Q9NQZ3 744 aaKnown RBP13.81□□□□□ -0.2
ZNF558-204ENST00000596172 SYNGR2O43760 224 aa13.8□□□□□ -0.2
ZNF558-204ENST00000596172 CD300EQ496F6 205 aaPredicted RBP13.8□□□□□ -0.2
ZNF558-204ENST00000596172 C11orf87Q6NUJ2 197 aa13.8□□□□□ -0.2
ZNF558-204ENST00000596172 TMEM116Q8NCL8 245 aa13.8□□□□□ -0.2
ZNF558-204ENST00000596172 OR52B4Q8NGK2 314 aa13.8□□□□□ -0.2
ZNF558-204ENST00000596172 DYNLRB2Q8TF09 96 aa13.8□□□□□ -0.2
ZNF558-204ENST00000596172 ZNF431Q8TF32 576 aaPredicted RBP13.8□□□□□ -0.2
ZNF558-204ENST00000596172 OR10C1Q96KK4 312 aa13.8□□□□□ -0.2
ZNF558-204ENST00000596172 MRPL36Q9P0J6 103 aaKnown RBP13.8□□□□□ -0.2
ZNF558-204ENST00000596172 TRAV30A0A087WSZ9 112 aa13.79□□□□□ -0.2
ZNF558-204ENST00000596172 MPTX1A8MV57 137 aa13.79□□□□□ -0.2
ZNF558-204ENST00000596172 SCGB2A1O75556 95 aa13.79□□□□□ -0.2
ZNF558-204ENST00000596172 IL5P05113 134 aa13.79□□□□□ -0.2
ZNF558-204ENST00000596172 EDN2P20800 178 aa13.79□□□□□ -0.2
ZNF558-204ENST00000596172 PRSS54Q6PEW0 395 aa13.79□□□□□ -0.2
ZNF558-204ENST00000596172 OR4D5Q8NGN0 318 aa13.79□□□□□ -0.2
ZNF558-204ENST00000596172 ENKURQ8TC29 256 aa13.79□□□□□ -0.2
ZNF558-204ENST00000596172 CACNG8Q8WXS5 425 aa13.79□□□□□ -0.2
ZNF558-204ENST00000596172 IZUMO1RA6ND01 250 aa13.78□□□□□ -0.2
ZNF558-204ENST00000596172 GPX4P36969 197 aaPredicted RBP13.78□□□□□ -0.2
ZNF558-204ENST00000596172 RPP30P78346 268 aaKnown RBP13.78□□□□□ -0.2
ZNF558-204ENST00000596172 ZNF600Q6ZNG1 722 aa13.78□□□□□ -0.2
ZNF558-204ENST00000596172 C20orf24Q9BUV8 137 aa13.78□□□□□ -0.2
ZNF558-204ENST00000596172 MLXQ9UH92 298 aa13.78□□□□□ -0.2
ZNF558-204ENST00000596172 TRAV25A0A0B4J276 109 aa13.77□□□□□ -0.21
ZNF558-204ENST00000596172 ZNF785A8K8V0 405 aa13.77□□□□□ -0.21
ZNF558-204ENST00000596172 IFNA4P05014 189 aa13.77□□□□□ -0.21
ZNF558-204ENST00000596172 DEFA1P59665 94 aa13.77□□□□□ -0.21
ZNF558-204ENST00000596172 DEFA3P59666 94 aa13.77□□□□□ -0.21
ZNF558-204ENST00000596172 RAB11AP62491 216 aa13.77□□□□□ -0.21
ZNF558-204ENST00000596172 CD69Q07108 199 aa13.77□□□□□ -0.21
ZNF558-204ENST00000596172 IAH1Q2TAA2 248 aaPredicted RBP13.77□□□□□ -0.21
ZNF558-204ENST00000596172 Q8N1Y9 231 aa13.77□□□□□ -0.21
ZNF558-204ENST00000596172 SEC22CQ9BRL7 303 aa13.77□□□□□ -0.21
ZNF558-204ENST00000596172 MAGT1Q9H0U3 335 aa13.77□□□□□ -0.21
ZNF558-204ENST00000596172 SMAD5-AS1Q9Y6J3 95 aa13.77□□□□□ -0.21
ZNF558-204ENST00000596172 YIF1AO95070 293 aa13.76□□□□□ -0.21
ZNF558-204ENST00000596172 IGKV1-17P01599 117 aa13.76□□□□□ -0.21
ZNF558-204ENST00000596172 IAPPP10997 89 aa13.76□□□□□ -0.21
ZNF558-204ENST00000596172 NKX2-1P43699 371 aaPredicted RBP13.76□□□□□ -0.21
ZNF558-204ENST00000596172 TOMM20LQ6UXN7 152 aa13.76□□□□□ -0.21
ZNF558-204ENST00000596172 NRARPQ7Z6K4 114 aa13.76□□□□□ -0.21
ZNF558-204ENST00000596172 C12orf45Q8N5I9 185 aaPredicted RBP13.76□□□□□ -0.21
ZNF558-204ENST00000596172 OR1S2Q8NGQ3 325 aa13.76□□□□□ -0.21
ZNF558-204ENST00000596172 B9D2Q9BPU9 175 aa13.76□□□□□ -0.21
ZNF558-204ENST00000596172 DNAH9Q9NYC9 4486 aa13.75□□□□□ -0.21
ZNF558-204ENST00000596172 WRBO00258 174 aa13.75□□□□□ -0.21
ZNF558-204ENST00000596172 IGLC1P0CG04 106 aa13.75□□□□□ -0.21
ZNF558-204ENST00000596172 RND2P52198 227 aa13.75□□□□□ -0.21
ZNF558-204ENST00000596172 YPEL3P61236 119 aaPredicted RBP13.75□□□□□ -0.21
ZNF558-204ENST00000596172 BTNL8Q6UX41 500 aa13.75□□□□□ -0.21
ZNF558-204ENST00000596172 SLC16A13Q7RTY0 426 aa13.75□□□□□ -0.21
ZNF558-204ENST00000596172 ZBTB8BQ8NAP8 495 aaPredicted RBP13.75□□□□□ -0.21
ZNF558-204ENST00000596172 GINS3Q9BRX5 216 aa13.75□□□□□ -0.21
ZNF558-204ENST00000596172 SMPXQ9UHP9 88 aa13.75□□□□□ -0.21
ZNF558-204ENST00000596172 PUS1Q9Y606 427 aaKnown RBP eCLIP13.75□□□□□ -0.21
ZNF558-204ENST00000596172 IGHV3OR16-8A0A075B7F1 116 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms