RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 ZNF343Q6P1L6 599 aa14.93□□□□□ -0.02
PNKP-207ENST00000596014 COMMD7Q86VX2 200 aa14.93□□□□□ -0.02
PNKP-207ENST00000596014 OR1N2Q8NGR9 330 aa14.93□□□□□ -0.02
PNKP-207ENST00000596014 CITED4Q96RK1 184 aa14.93□□□□□ -0.02
PNKP-207ENST00000596014 ENY2Q9NPA8 101 aa14.93□□□□□ -0.02
PNKP-207ENST00000596014 LSM5Q9Y4Y9 91 aaKnown RBP14.93□□□□□ -0.02
PNKP-207ENST00000596014 CYB5BO43169 146 aa14.92□□□□□ -0.02
PNKP-207ENST00000596014 DEDDO75618 318 aa14.92□□□□□ -0.02
PNKP-207ENST00000596014 HOXA1P49639 335 aaPredicted RBP14.92□□□□□ -0.02
PNKP-207ENST00000596014 ZNF114Q8NC26 417 aa14.92□□□□□ -0.02
PNKP-207ENST00000596014 OR1L6Q8NGR2 347 aa14.92□□□□□ -0.02
PNKP-207ENST00000596014 OR1P1Q8NH06 330 aa14.92□□□□□ -0.02
PNKP-207ENST00000596014 THYN1Q9P016 225 aa14.92□□□□□ -0.02
PNKP-207ENST00000596014 HSPB7Q9UBY9 170 aa14.92□□□□□ -0.02
PNKP-207ENST00000596014 NBEAL1Q6ZS30 2694 aa14.92□□□□□ -0.02
PNKP-207ENST00000596014 NMBP08949 121 aa14.91□□□□□ -0.02
PNKP-207ENST00000596014 SNCAP37840 140 aa14.91□□□□□ -0.02
PNKP-207ENST00000596014 TNFRSF9Q07011 255 aa14.91□□□□□ -0.02
PNKP-207ENST00000596014 FHL3Q13643 280 aa14.91□□□□□ -0.02
PNKP-207ENST00000596014 STOML3Q8TAV4 291 aa14.91□□□□□ -0.02
PNKP-207ENST00000596014 PHYHIPLQ96FC7 376 aa14.91□□□□□ -0.02
PNKP-207ENST00000596014 CEBPZOSA8MTT3 80 aa14.9□□□□□ -0.02
PNKP-207ENST00000596014 K7EPK0 472 aa14.9□□□□□ -0.02
PNKP-207ENST00000596014 HSPB1P04792 205 aaKnown RBP14.9□□□□□ -0.02
PNKP-207ENST00000596014 ZNF616Q08AN1 781 aa14.9□□□□□ -0.02
PNKP-207ENST00000596014 LINC00482Q8N8I6 264 aa14.9□□□□□ -0.02
PNKP-207ENST00000596014 DPF1Q92782 380 aa14.9□□□□□ -0.02
PNKP-207ENST00000596014 IGHV4OR15-8A0A075B7B6 117 aa14.9□□□□□ -0.02
PNKP-207ENST00000596014 A0A087WW49 117 aa14.9□□□□□ -0.02
PNKP-207ENST00000596014 MBPP02686 304 aaPredicted RBP14.9□□□□□ -0.02
PNKP-207ENST00000596014 WFDC9Q8NEX5 89 aa14.9□□□□□ -0.02
PNKP-207ENST00000596014 OR4D5Q8NGN0 318 aa14.9□□□□□ -0.02
PNKP-207ENST00000596014 HEYLQ9NQ87 328 aaPredicted RBP14.9□□□□□ -0.02
PNKP-207ENST00000596014 PEF1Q9UBV8 284 aaKnown RBP14.9□□□□□ -0.02
PNKP-207ENST00000596014 CXorf58Q96LI9 332 aa14.89□□□□□ -0.03
PNKP-207ENST00000596014 RBKSQ9H477 322 aa14.89□□□□□ -0.03
PNKP-207ENST00000596014 S4R3C0 116 aa14.89□□□□□ -0.03
PNKP-207ENST00000596014 MFSD2BA6NFX1 497 aa14.88□□□□□ -0.03
PNKP-207ENST00000596014 FAM90A26D6RGX4 464 aa14.88□□□□□ -0.03
PNKP-207ENST00000596014 LINC01619G3V211 115 aa14.88□□□□□ -0.03
PNKP-207ENST00000596014 TRBV12-3P01733 135 aa14.88□□□□□ -0.03
PNKP-207ENST00000596014 RNASE2P10153 161 aaKnown RBP14.88□□□□□ -0.03
PNKP-207ENST00000596014 TPT1P13693 172 aaKnown RBP14.88□□□□□ -0.03
PNKP-207ENST00000596014 SLC25A32Q9H2D1 315 aa14.88□□□□□ -0.03
PNKP-207ENST00000596014 CYTL1Q9NRR1 136 aa14.88□□□□□ -0.03
PNKP-207ENST00000596014 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.87□□□□□ -0.03
PNKP-207ENST00000596014 IGHV3-23P01764 117 aa14.87□□□□□ -0.03
PNKP-207ENST00000596014 SUB1P53999 127 aaKnown RBP eCLIP14.87□□□□□ -0.03
PNKP-207ENST00000596014 BSXQ3C1V8 233 aa14.87□□□□□ -0.03
PNKP-207ENST00000596014 VN1R17PQ8TDU5 208 aa14.87□□□□□ -0.03
PNKP-207ENST00000596014 DTD1Q8TEA8 209 aa14.87□□□□□ -0.03
PNKP-207ENST00000596014 EEF1AKMT3Q96AZ1 226 aa14.87□□□□□ -0.03
PNKP-207ENST00000596014 HIPK2Q9H2X6 1198 aa14.87□□□□□ -0.03
PNKP-207ENST00000596014 RCL1Q9Y2P8 373 aaKnown RBP14.87□□□□□ -0.03
PNKP-207ENST00000596014 E5RGE8 158 aa14.87□□□□□ -0.03
PNKP-207ENST00000596014 OR8U8P0C7N1 319 aa14.87□□□□□ -0.03
PNKP-207ENST00000596014 CD33P20138 364 aa14.87□□□□□ -0.03
PNKP-207ENST00000596014 RPL12P30050 165 aaKnown RBP14.87□□□□□ -0.03
PNKP-207ENST00000596014 FAM74A1Q5RGS3 127 aa14.87□□□□□ -0.03
PNKP-207ENST00000596014 PVRIGQ6DKI7 326 aa14.87□□□□□ -0.03
PNKP-207ENST00000596014 MISP3Q96FF7 219 aa14.87□□□□□ -0.03
PNKP-207ENST00000596014 ZC4H2Q9NQZ6 224 aa14.87□□□□□ -0.03
PNKP-207ENST00000596014 MED9Q9NWA0 146 aa14.87□□□□□ -0.03
PNKP-207ENST00000596014 TRBV7-1A0A0A6YYK4 115 aa14.86□□□□□ -0.03
PNKP-207ENST00000596014 IGHV3-21A0A0B4J1V1 117 aa14.86□□□□□ -0.03
PNKP-207ENST00000596014 K7EIM0 57 aa14.86□□□□□ -0.03
PNKP-207ENST00000596014 ID3Q02535 119 aa14.86□□□□□ -0.03
PNKP-207ENST00000596014 FAM209BQ5JX69 171 aa14.86□□□□□ -0.03
PNKP-207ENST00000596014 CCDC140Q96MF4 163 aa14.86□□□□□ -0.03
PNKP-207ENST00000596014 NOTCH1P46531 2555 aa14.86□□□□□ -0.03
PNKP-207ENST00000596014 MED6O75586 246 aa14.85□□□□□ -0.03
PNKP-207ENST00000596014 SLURP1P55000 103 aa14.85□□□□□ -0.03
PNKP-207ENST00000596014 TOR2AQ5JU69 321 aa14.85□□□□□ -0.03
PNKP-207ENST00000596014 CLEC19AQ6UXS0 136 aa14.85□□□□□ -0.03
PNKP-207ENST00000596014 SLC24A4Q8NFF2 622 aa14.85□□□□□ -0.03
PNKP-207ENST00000596014 ZNF502Q8TBZ5 544 aa14.85□□□□□ -0.03
PNKP-207ENST00000596014 MAGT1Q9H0U3 335 aa14.85□□□□□ -0.03
PNKP-207ENST00000596014 I3L2K1 104 aa14.84□□□□□ -0.03
PNKP-207ENST00000596014 TAAR5O14804 337 aa14.84□□□□□ -0.03
PNKP-207ENST00000596014 CLEC3BP05452 202 aa14.84□□□□□ -0.03
PNKP-207ENST00000596014 ZP3P21754 424 aa14.84□□□□□ -0.03
PNKP-207ENST00000596014 HOXD3P31249 432 aaPredicted RBP14.84□□□□□ -0.03
PNKP-207ENST00000596014 C2orf83Q53S99 150 aa14.84□□□□□ -0.03
PNKP-207ENST00000596014 PINX1Q96BK5 328 aaKnown RBP14.84□□□□□ -0.03
PNKP-207ENST00000596014 FBXL17Q9UF56 701 aa14.84□□□□□ -0.03
PNKP-207ENST00000596014 PFDN2Q9UHV9 154 aa14.84□□□□□ -0.03
PNKP-207ENST00000596014 PPP5D1E7EU14 171 aa14.84□□□□□ -0.03
PNKP-207ENST00000596014 SYNGR2O43760 224 aa14.84□□□□□ -0.03
PNKP-207ENST00000596014 MT-CO2P00403 227 aa14.84□□□□□ -0.03
PNKP-207ENST00000596014 P2RY1P47900 373 aa14.84□□□□□ -0.03
PNKP-207ENST00000596014 BAP18Q8IXM2 172 aa14.84□□□□□ -0.03
PNKP-207ENST00000596014 TMEM170AQ8WVE7 144 aa14.84□□□□□ -0.03
PNKP-207ENST00000596014 DLX4Q92988 240 aaPredicted RBP14.84□□□□□ -0.03
PNKP-207ENST00000596014 C11orf1Q9H5F2 150 aa14.84□□□□□ -0.03
PNKP-207ENST00000596014 C21orf62Q9NYP8 219 aa14.84□□□□□ -0.03
PNKP-207ENST00000596014 CORTO00230 105 aa14.83□□□□□ -0.04
PNKP-207ENST00000596014 BMPR1BO00238 502 aa14.83□□□□□ -0.04
PNKP-207ENST00000596014 IAPPP10997 89 aa14.83□□□□□ -0.04
PNKP-207ENST00000596014 NKX2-1P43699 371 aaPredicted RBP14.83□□□□□ -0.04
PNKP-207ENST00000596014 IFNA10P01566 189 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms