RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 PAXXQ9BUH6 204 aa10.74□□□□□ -0.69
VRK3-209ENST00000594948 LINC00312Q9Y6C7 94 aa10.74□□□□□ -0.69
VRK3-209ENST00000594948 TCRBV4S1A1TA0A5B7 111 aa10.74□□□□□ -0.69
VRK3-209ENST00000594948 TNFSF4P23510 183 aa10.74□□□□□ -0.69
VRK3-209ENST00000594948 MYCNOSP40205 109 aa10.74□□□□□ -0.69
VRK3-209ENST00000594948 CCL11P51671 97 aa10.74□□□□□ -0.69
VRK3-209ENST00000594948 RPL8P62917 257 aaKnown RBP10.74□□□□□ -0.69
VRK3-209ENST00000594948 MEF2CQ06413 473 aaPredicted RBP10.74□□□□□ -0.69
VRK3-209ENST00000594948 C10orf113Q5VZT2 155 aa10.74□□□□□ -0.69
VRK3-209ENST00000594948 Q6ZN92 141 aa10.74□□□□□ -0.69
VRK3-209ENST00000594948 NUDT10Q8NFP7 164 aa10.74□□□□□ -0.69
VRK3-209ENST00000594948 VSTM2AQ8TAG5 236 aa10.74□□□□□ -0.69
VRK3-209ENST00000594948 ORAOV1Q8WV07 137 aa10.74□□□□□ -0.69
VRK3-209ENST00000594948 NUDT11Q96G61 164 aa10.74□□□□□ -0.69
VRK3-209ENST00000594948 GAL3ST2Q9H3Q3 398 aa10.74□□□□□ -0.69
VRK3-209ENST00000594948 C7orf69Q9H7B7 122 aa10.74□□□□□ -0.69
VRK3-209ENST00000594948 SUB1P53999 127 aaKnown RBP eCLIP10.73□□□□□ -0.69
VRK3-209ENST00000594948 TNFAIP6P98066 277 aaPredicted RBP10.73□□□□□ -0.69
VRK3-209ENST00000594948 MMDQ15546 238 aa10.73□□□□□ -0.69
VRK3-209ENST00000594948 MLANAQ16655 118 aa10.73□□□□□ -0.69
VRK3-209ENST00000594948 DUX4L9Q6RFH8 374 aaPredicted RBP10.73□□□□□ -0.69
VRK3-209ENST00000594948 C11orf42Q8N5U0 333 aa10.73□□□□□ -0.69
VRK3-209ENST00000594948 NUP35Q8NFH5 326 aa10.73□□□□□ -0.69
VRK3-209ENST00000594948 STXBP6Q8NFX7 210 aa10.73□□□□□ -0.69
VRK3-209ENST00000594948 OR8B3Q8NGG8 313 aa10.73□□□□□ -0.69
VRK3-209ENST00000594948 OR5AN1Q8NGI8 311 aa10.73□□□□□ -0.69
VRK3-209ENST00000594948 OR8B2Q96RD0 313 aa10.73□□□□□ -0.69
VRK3-209ENST00000594948 ALKBH7Q9BT30 221 aaPredicted RBP10.73□□□□□ -0.69
VRK3-209ENST00000594948 ZNF355PQ9NSJ1 428 aa10.73□□□□□ -0.69
VRK3-209ENST00000594948 C1RLQ9NZP8 487 aa10.73□□□□□ -0.69
VRK3-209ENST00000594948 SOX21Q9Y651 276 aaPredicted RBP10.73□□□□□ -0.69
VRK3-209ENST00000594948 TRAV9-2A0A087WT02 112 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 TRAV5A0A0B4J249 113 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 A0A1B0GXF2 115 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 H0YJW9 148 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 HSBP1O75506 76 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 FSTL3O95633 263 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 IGHV1-46P01743 117 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 CA7P43166 264 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 MFAP2P55001 183 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 FAM201AQ5SY85 155 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 MORN5Q5VZ52 161 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 CYB5R2Q6BCY4 276 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 SEM1Q6ZVN7 128 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 FAM168AQ92567 244 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 FXYD5Q96DB9 178 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 SNRNP40Q96DI7 357 aaKnown RBP10.72□□□□□ -0.69
VRK3-209ENST00000594948 HARBI1Q96MB7 349 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 CLEC7AQ9BXN2 247 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 TNCP24821 2201 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 IGHV2-26A0A0B4J1V2 119 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 FAM181BA6NEQ2 426 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 NKX6-3A6NJ46 265 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 SIAH2O43255 324 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 NTF3P20783 257 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 TNXAQ16473 311 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 CT83Q5H943 113 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 PATE2Q6UY27 113 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 PDPNQ86YL7 162 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 FAM19A2Q8N3H0 131 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 C8orf31Q8N9H6 132 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 OR10W1Q8NGF6 305 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 GUCD1Q96NT3 240 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 CCL13Q99616 98 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 KLF12Q9Y4X4 402 aa10.72□□□□□ -0.69
VRK3-209ENST00000594948 CA1P00915 261 aaPredicted RBP10.71□□□□□ -0.69
VRK3-209ENST00000594948 TSPOP30536 169 aa10.71□□□□□ -0.69
VRK3-209ENST00000594948 GDF5OSQ5U4N7 250 aa10.71□□□□□ -0.69
VRK3-209ENST00000594948 DMRTA1Q5VZB9 504 aa10.71□□□□□ -0.69
VRK3-209ENST00000594948 FAM216BQ8N7L0 139 aa10.71□□□□□ -0.69
VRK3-209ENST00000594948 STPG4Q8N801 248 aa10.71□□□□□ -0.69
VRK3-209ENST00000594948 OR2T6Q8NHC8 308 aa10.71□□□□□ -0.69
VRK3-209ENST00000594948 ZNF596Q8TC21 504 aa10.71□□□□□ -0.69
VRK3-209ENST00000594948 SSBP3Q9BWW4 388 aaPredicted RBP10.71□□□□□ -0.69
VRK3-209ENST00000594948 MRPL20Q9BYC9 149 aaKnown RBP10.71□□□□□ -0.69
VRK3-209ENST00000594948 TNFRSF19Q9NS68 423 aa10.71□□□□□ -0.69
VRK3-209ENST00000594948 ZNF492Q9P255 531 aa10.71□□□□□ -0.69
VRK3-209ENST00000594948 IGKV1D-37A0A075B6S9 117 aa10.7□□□□□ -0.7
VRK3-209ENST00000594948 M0R2Z0 102 aa10.7□□□□□ -0.7
VRK3-209ENST00000594948 NKX2-8O15522 239 aa10.7□□□□□ -0.7
VRK3-209ENST00000594948 NDUFB8O95169 186 aa10.7□□□□□ -0.7
VRK3-209ENST00000594948 PYYP10082 97 aa10.7□□□□□ -0.7
VRK3-209ENST00000594948 TFPI2P48307 235 aa10.7□□□□□ -0.7
VRK3-209ENST00000594948 UBE2G1P62253 170 aa10.7□□□□□ -0.7
VRK3-209ENST00000594948 PVRIGQ6DKI7 326 aa10.7□□□□□ -0.7
VRK3-209ENST00000594948 ZNF474Q6S9Z5 364 aaPredicted RBP10.7□□□□□ -0.7
VRK3-209ENST00000594948 LINC00311Q8N616 119 aa10.7□□□□□ -0.7
VRK3-209ENST00000594948 FLYWCH2Q96CP2 140 aaKnown RBP10.7□□□□□ -0.7
VRK3-209ENST00000594948 PERPQ96FX8 193 aa10.7□□□□□ -0.7
VRK3-209ENST00000594948 KNTC1P50748 2209 aa10.7□□□□□ -0.7
VRK3-209ENST00000594948 TOMM40O96008 361 aa10.7□□□□□ -0.7
VRK3-209ENST00000594948 ZCCHC24Q8N2G6 241 aaKnown RBP10.7□□□□□ -0.7
VRK3-209ENST00000594948 NHLRC2Q8NBF2 726 aa10.7□□□□□ -0.7
VRK3-209ENST00000594948 OR4C13Q8NGP0 309 aa10.7□□□□□ -0.7
VRK3-209ENST00000594948 TMEM190Q8WZ59 177 aa10.7□□□□□ -0.7
VRK3-209ENST00000594948 LINC00479Q96M42 142 aa10.7□□□□□ -0.7
VRK3-209ENST00000594948 WNT10AQ9GZT5 417 aa10.7□□□□□ -0.7
VRK3-209ENST00000594948 EPDR1Q9UM22 224 aa10.7□□□□□ -0.7
VRK3-209ENST00000594948 C2orf70A6NJV1 201 aa10.69□□□□□ -0.7
VRK3-209ENST00000594948 CGB1A6NKQ9 187 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms