RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 ASB16-AS1Q495Z4 193 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 FAM162BQ5T6X4 162 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 TMEM236Q5W0B7 351 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 EBLN2Q6P2I7 272 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 DPPA3Q6W0C5 159 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 SIGLEC15Q6ZMC9 328 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 C6orf201Q7Z4U5 140 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 DAZ4Q86SG3 579 aaKnown RBP1.81□□□□□ -2.12
VRK3-204ENST00000593912 CROCCP3Q8IVE0 287 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 INO80EQ8NBZ0 244 aaPredicted RBP1.81□□□□□ -2.12
VRK3-204ENST00000593912 COQ8AQ8NI60 647 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 SPACA4Q8TDM5 124 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 MCUR1Q96AQ8 359 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 GPR146Q96CH1 333 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 ORAI1Q96D31 301 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 LINC00479Q96M42 142 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 S100A13Q99584 98 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 CCDC28BQ9BUN5 200 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 SELENOIQ9C0D9 397 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 RIMS4Q9H426 269 aaPredicted RBP1.81□□□□□ -2.12
VRK3-204ENST00000593912 HRASLSQ9HDD0 168 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 DAZ3Q9NR90 486 aaKnown RBP1.81□□□□□ -2.12
VRK3-204ENST00000593912 CLN6Q9NWW5 311 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 CMTM6Q9NX76 183 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 PLAC8Q9NZF1 115 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 DOK5Q9P104 306 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 GHRLQ9UBU3 117 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 PRO0255Q9UI72 69 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 GNG8Q9UK08 70 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 LRRC42Q9Y546 428 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 GMPPBQ9Y5P6 360 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 U3KQE9 123 aa1.81□□□□□ -2.12
VRK3-204ENST00000593912 TRGV1A0A0A0MS02 117 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 SNURFLB1AK76 121 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 SOCS3O14543 225 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 BET1O15155 118 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 PRSS1P07477 247 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 CD37P11049 281 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 PI3P19957 117 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 ETV6P41212 452 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 CNN1P51911 297 aaKnown RBP1.8□□□□□ -2.12
VRK3-204ENST00000593912 BRWD1-AS2P59051 145 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 PSME3P61289 254 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 FGL1Q08830 312 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 FHL2Q14192 279 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 TBCEQ15813 527 aaPredicted RBP1.8□□□□□ -2.12
VRK3-204ENST00000593912 TMEM183BQ1AE95 376 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 OR10J3Q5JRS4 329 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 GLYATQ6IB77 296 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 ZNF493Q6ZR52 646 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 KCTD9Q7L273 389 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 DHFR2Q86XF0 187 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 TMEM183AQ8IXX5 376 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 ADGRG5Q8IZF4 528 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 OR5D14Q8NGL3 314 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 OR6F1Q8NGZ6 308 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 PINX1Q96BK5 328 aaKnown RBP1.8□□□□□ -2.12
VRK3-204ENST00000593912 RNF185Q96GF1 192 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 NARS2Q96I59 477 aaKnown RBP1.8□□□□□ -2.12
VRK3-204ENST00000593912 ADTRPQ96IZ2 230 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 SH3GL1Q99961 368 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 QTRT1Q9BXR0 403 aaKnown RBP1.8□□□□□ -2.12
VRK3-204ENST00000593912 ARL8BQ9NVJ2 186 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 MRPL36Q9P0J6 103 aaKnown RBP1.8□□□□□ -2.12
VRK3-204ENST00000593912 HHLA3Q9XRX5 114 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 FUT9Q9Y231 359 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 ARL2BPQ9Y2Y0 163 aa1.8□□□□□ -2.12
VRK3-204ENST00000593912 RBM7Q9Y580 266 aaKnown RBP1.8□□□□□ -2.12
VRK3-204ENST00000593912 IGLV7-46A0A075B6I9 117 aa1.79□□□□□ -2.12
VRK3-204ENST00000593912 TRAV8-3A0A0A6YYJ7 113 aa1.79□□□□□ -2.12
VRK3-204ENST00000593912 A0A0B4J293 547 aa1.79□□□□□ -2.12
VRK3-204ENST00000593912 TEX50A0A1B0GTY4 177 aa1.79□□□□□ -2.12
VRK3-204ENST00000593912 SAC3D1A6NKF1 404 aa1.79□□□□□ -2.12
VRK3-204ENST00000593912 OR4C45A6NMZ5 311 aa1.79□□□□□ -2.12
VRK3-204ENST00000593912 USP17L23D6RBM5 183 aa1.79□□□□□ -2.12
VRK3-204ENST00000593912 BOLA2-SMG1P6H3BVE0 249 aa1.79□□□□□ -2.12
VRK3-204ENST00000593912 TNFRSF11BO00300 401 aa1.79□□□□□ -2.12
VRK3-204ENST00000593912 NME4O00746 187 aa1.79□□□□□ -2.12
VRK3-204ENST00000593912 MRASO14807 208 aa1.79□□□□□ -2.12
VRK3-204ENST00000593912 CRTAPO75718 401 aaPredicted RBP1.79□□□□□ -2.12
VRK3-204ENST00000593912 CCNB2O95067 398 aa1.79□□□□□ -2.12
VRK3-204ENST00000593912 TMEM50AO95807 157 aa1.79□□□□□ -2.12
VRK3-204ENST00000593912 HNRNPCP07910 306 aaKnown RBP eCLIP1.79□□□□□ -2.12
VRK3-204ENST00000593912 SFTA3P0C7M3 94 aa1.79□□□□□ -2.12
VRK3-204ENST00000593912 TRAPPC2P0DI81 140 aa1.79□□□□□ -2.12
VRK3-204ENST00000593912 TRAPPC2BP0DI82 140 aa1.79□□□□□ -2.12
VRK3-204ENST00000593912 HSD17B1P14061 328 aa1.79□□□□□ -2.12
VRK3-204ENST00000593912 GATA1P15976 413 aaPredicted RBP1.79□□□□□ -2.12
VRK3-204ENST00000593912 CD36P16671 472 aa1.79□□□□□ -2.12
VRK3-204ENST00000593912 VAMP1P23763 118 aa1.79□□□□□ -2.12
VRK3-204ENST00000593912 ZNF93P35789 620 aaPredicted RBP1.79□□□□□ -2.12
VRK3-204ENST00000593912 PSMB3P49720 205 aa1.79□□□□□ -2.12
VRK3-204ENST00000593912 PPT1P50897 306 aa1.79□□□□□ -2.12
VRK3-204ENST00000593912 AP2S1P53680 142 aaPredicted RBP1.79□□□□□ -2.12
VRK3-204ENST00000593912 TAS2R43P59537 309 aa1.79□□□□□ -2.12
VRK3-204ENST00000593912 KRTAP19-6Q3LI70 58 aa1.79□□□□□ -2.12
VRK3-204ENST00000593912 TIGITQ495A1 244 aa1.79□□□□□ -2.12
VRK3-204ENST00000593912 SPATA31B1PQ5VZV4 182 aa1.79□□□□□ -2.12
VRK3-204ENST00000593912 TTC23Q5W5X9 447 aa1.79□□□□□ -2.12
VRK3-204ENST00000593912 IGFL4Q6B9Z1 124 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms