RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 SCPEP1Q9HB40 452 aa11.85□□□□□ -0.51
LIG1-205ENST00000593425 COMMD3Q9UBI1 195 aa11.85□□□□□ -0.51
LIG1-205ENST00000593425 X6R8D5 127 aa11.85□□□□□ -0.51
LIG1-205ENST00000593425 ELOA3CA0A087WX78 387 aaPredicted RBP11.84□□□□□ -0.51
LIG1-205ENST00000593425 ZNF705EA8MWA4 302 aaPredicted RBP11.84□□□□□ -0.51
LIG1-205ENST00000593425 ZNF688P0C7X2 276 aa11.84□□□□□ -0.51
LIG1-205ENST00000593425 NPPCP23582 126 aa11.84□□□□□ -0.51
LIG1-205ENST00000593425 P2RY1P47900 373 aa11.84□□□□□ -0.51
LIG1-205ENST00000593425 AKR1C2P52895 323 aa11.84□□□□□ -0.51
LIG1-205ENST00000593425 RND3P61587 244 aa11.84□□□□□ -0.51
LIG1-205ENST00000593425 MLANAQ16655 118 aa11.84□□□□□ -0.51
LIG1-205ENST00000593425 GRAMD2BQ96HH9 432 aa11.84□□□□□ -0.51
LIG1-205ENST00000593425 IGHV4-4A0A075B6R2 117 aa11.83□□□□□ -0.52
LIG1-205ENST00000593425 A0A0G2JRQ6 117 aa11.83□□□□□ -0.52
LIG1-205ENST00000593425 A0A1W2PS18 150 aa11.83□□□□□ -0.52
LIG1-205ENST00000593425 CORTO00230 105 aa11.83□□□□□ -0.52
LIG1-205ENST00000593425 CLN5O75503 358 aa11.83□□□□□ -0.52
LIG1-205ENST00000593425 IFNA17P01571 189 aa11.83□□□□□ -0.52
LIG1-205ENST00000593425 APOA1P02647 267 aa11.83□□□□□ -0.52
LIG1-205ENST00000593425 SPP1P10451 314 aa11.83□□□□□ -0.52
LIG1-205ENST00000593425 MIFP14174 115 aa11.83□□□□□ -0.52
LIG1-205ENST00000593425 PGAM2P15259 253 aa11.83□□□□□ -0.52
LIG1-205ENST00000593425 CRYBB3P26998 211 aa11.83□□□□□ -0.52
LIG1-205ENST00000593425 OPRK1P41145 380 aa11.83□□□□□ -0.52
LIG1-205ENST00000593425 ETV6P41212 452 aa11.83□□□□□ -0.52
LIG1-205ENST00000593425 HOXA1P49639 335 aaPredicted RBP11.83□□□□□ -0.52
LIG1-205ENST00000593425 PIGPP57054 158 aa11.83□□□□□ -0.52
LIG1-205ENST00000593425 RNASE12Q5GAN4 147 aaKnown RBP11.83□□□□□ -0.52
LIG1-205ENST00000593425 MORN3Q6PF18 240 aaPredicted RBP11.83□□□□□ -0.52
LIG1-205ENST00000593425 LHFPL1Q86WI0 220 aa11.83□□□□□ -0.52
LIG1-205ENST00000593425 DCANP1Q8TF63 244 aa11.83□□□□□ -0.52
LIG1-205ENST00000593425 METTL26Q96S19 204 aa11.83□□□□□ -0.52
LIG1-205ENST00000593425 CLEC5AQ9NY25 188 aa11.83□□□□□ -0.52
LIG1-205ENST00000593425 FAT2Q9NYQ8 4349 aa11.82□□□□□ -0.52
LIG1-205ENST00000593425 TRAV10A0A0B4J240 114 aa11.82□□□□□ -0.52
LIG1-205ENST00000593425 SMIM31A0A1B0GVY4 71 aa11.82□□□□□ -0.52
LIG1-205ENST00000593425 ELK1P19419 428 aa11.82□□□□□ -0.52
LIG1-205ENST00000593425 TIGITQ495A1 244 aa11.82□□□□□ -0.52
LIG1-205ENST00000593425 TMEM41BQ5BJD5 291 aa11.82□□□□□ -0.52
LIG1-205ENST00000593425 CSNK1G2-AS1Q8NCQ2 148 aa11.82□□□□□ -0.52
LIG1-205ENST00000593425 ZNF486Q96H40 463 aaPredicted RBP11.82□□□□□ -0.52
LIG1-205ENST00000593425 PDCD10Q9BUL8 212 aa11.82□□□□□ -0.52
LIG1-205ENST00000593425 CELA1Q9UNI1 258 aa11.82□□□□□ -0.52
LIG1-205ENST00000593425 DNAH2Q9P225 4427 aa11.81□□□□□ -0.52
LIG1-205ENST00000593425 HPGDSO60760 199 aa11.81□□□□□ -0.52
LIG1-205ENST00000593425 IGKV1-17P01599 117 aa11.81□□□□□ -0.52
LIG1-205ENST00000593425 SUB1P53999 127 aaKnown RBP eCLIP11.81□□□□□ -0.52
LIG1-205ENST00000593425 NCS1P62166 190 aa11.81□□□□□ -0.52
LIG1-205ENST00000593425 BSXQ3C1V8 233 aa11.81□□□□□ -0.52
LIG1-205ENST00000593425 ACTL10Q5JWF8 245 aa11.81□□□□□ -0.52
LIG1-205ENST00000593425 OR4X1Q8NH49 305 aa11.81□□□□□ -0.52
LIG1-205ENST00000593425 TMEM230Q96A57 120 aa11.81□□□□□ -0.52
LIG1-205ENST00000593425 C3orf85A0A1B0GTC6 90 aa11.8□□□□□ -0.52
LIG1-205ENST00000593425 SP6Q3SY56 376 aa11.8□□□□□ -0.52
LIG1-205ENST00000593425 ZNF767PQ75MW2 155 aa11.8□□□□□ -0.52
LIG1-205ENST00000593425 KLK11Q9UBX7 282 aa11.8□□□□□ -0.52
LIG1-205ENST00000593425 TBC1D24Q9ULP9 559 aa11.8□□□□□ -0.52
LIG1-205ENST00000593425 RPL5P46777 297 aaKnown RBP11.79□□□□□ -0.52
LIG1-205ENST00000593425 TRIM16LQ309B1 348 aa11.79□□□□□ -0.52
LIG1-205ENST00000593425 RNASE10Q5GAN6 216 aaKnown RBP11.79□□□□□ -0.52
LIG1-205ENST00000593425 Q6ZRM9 215 aa11.79□□□□□ -0.52
LIG1-205ENST00000593425 SCRT1Q9BWW7 348 aa11.79□□□□□ -0.52
LIG1-205ENST00000593425 ENY2Q9NPA8 101 aa11.79□□□□□ -0.52
LIG1-205ENST00000593425 U3KQE9 123 aa11.79□□□□□ -0.52
LIG1-205ENST00000593425 A0A1B0GVY2 172 aa11.78□□□□□ -0.52
LIG1-205ENST00000593425 CD3DP04234 171 aa11.78□□□□□ -0.52
LIG1-205ENST00000593425 UCP1P25874 307 aa11.78□□□□□ -0.52
LIG1-205ENST00000593425 VBP1P61758 197 aa11.78□□□□□ -0.52
LIG1-205ENST00000593425 DHRS2Q13268 280 aa11.78□□□□□ -0.52
LIG1-205ENST00000593425 C12orf74Q32Q52 190 aa11.78□□□□□ -0.52
LIG1-205ENST00000593425 PSMG4Q5JS54 123 aa11.78□□□□□ -0.52
LIG1-205ENST00000593425 C16orf54Q6UWD8 224 aa11.78□□□□□ -0.52
LIG1-205ENST00000593425 OR4D10Q8NGI6 311 aa11.78□□□□□ -0.52
LIG1-205ENST00000593425 GLMPQ8WWB7 406 aa11.78□□□□□ -0.52
LIG1-205ENST00000593425 NARS2Q96I59 477 aaKnown RBP11.78□□□□□ -0.52
LIG1-205ENST00000593425 RAB40CQ96S21 281 aa11.78□□□□□ -0.52
LIG1-205ENST00000593425 RNF126Q9BV68 326 aa11.78□□□□□ -0.52
LIG1-205ENST00000593425 DNAH17Q9UFH2 4485 aa11.78□□□□□ -0.52
LIG1-205ENST00000593425 DYNC1H1Q14204 4646 aaKnown RBP11.77□□□□□ -0.53
LIG1-205ENST00000593425 SCGB2A1O75556 95 aa11.77□□□□□ -0.53
LIG1-205ENST00000593425 ATG12O94817 140 aa11.77□□□□□ -0.53
LIG1-205ENST00000593425 AMBPP02760 352 aa11.77□□□□□ -0.53
LIG1-205ENST00000593425 IGLC1P0CG04 106 aa11.77□□□□□ -0.53
LIG1-205ENST00000593425 LINC00336Q6ZUF6 198 aa11.77□□□□□ -0.53
LIG1-205ENST00000593425 ARRDC1Q8N5I2 433 aa11.77□□□□□ -0.53
LIG1-205ENST00000593425 OR52I2Q8NH67 350 aa11.77□□□□□ -0.53
LIG1-205ENST00000593425 RNASE11Q8TAA1 199 aaKnown RBP11.77□□□□□ -0.53
LIG1-205ENST00000593425 RRNAD1Q96FB5 475 aaKnown RBP11.77□□□□□ -0.53
LIG1-205ENST00000593425 VCX3AQ9NNX9 186 aa11.77□□□□□ -0.53
LIG1-205ENST00000593425 COPZ2Q9P299 210 aa11.77□□□□□ -0.53
LIG1-205ENST00000593425 TRAV30A0A087WSZ9 112 aa11.76□□□□□ -0.53
LIG1-205ENST00000593425 A0A087WXM4 84 aa11.76□□□□□ -0.53
LIG1-205ENST00000593425 DEFB131BA0A096LNP1 70 aa11.76□□□□□ -0.53
LIG1-205ENST00000593425 HELTA6NFD8 242 aa11.76□□□□□ -0.53
LIG1-205ENST00000593425 FAM25AB3EWG3 89 aa11.76□□□□□ -0.53
LIG1-205ENST00000593425 FAM25CB3EWG5 89 aa11.76□□□□□ -0.53
LIG1-205ENST00000593425 FAM25GB3EWG6 89 aa11.76□□□□□ -0.53
LIG1-205ENST00000593425 HNRNPCP07910 306 aaKnown RBP eCLIP11.76□□□□□ -0.53
LIG1-205ENST00000593425 RND2P52198 227 aa11.76□□□□□ -0.53
LIG1-205ENST00000593425 USF2Q15853 346 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms