RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 IFNA17P01571 189 aa12.64□□□□□ -0.39
RETREG3-212ENST00000593251 RNASE2P10153 161 aaKnown RBP12.64□□□□□ -0.39
RETREG3-212ENST00000593251 PI3P19957 117 aa12.64□□□□□ -0.39
RETREG3-212ENST00000593251 P2RY1P47900 373 aa12.64□□□□□ -0.39
RETREG3-212ENST00000593251 UCP3P55916 312 aa12.64□□□□□ -0.39
RETREG3-212ENST00000593251 ACTL10Q5JWF8 245 aa12.64□□□□□ -0.39
RETREG3-212ENST00000593251 ZNF767PQ75MW2 155 aa12.64□□□□□ -0.39
RETREG3-212ENST00000593251 FNDC4Q9H6D8 234 aaPredicted RBP12.64□□□□□ -0.39
RETREG3-212ENST00000593251 CELA1Q9UNI1 258 aa12.64□□□□□ -0.39
RETREG3-212ENST00000593251 A0A0B4J293 547 aa12.63□□□□□ -0.39
RETREG3-212ENST00000593251 A0A1W2PS18 150 aa12.63□□□□□ -0.39
RETREG3-212ENST00000593251 ZNF705EA8MWA4 302 aaPredicted RBP12.63□□□□□ -0.39
RETREG3-212ENST00000593251 SPP1P10451 314 aa12.63□□□□□ -0.39
RETREG3-212ENST00000593251 ETV6P41212 452 aa12.63□□□□□ -0.39
RETREG3-212ENST00000593251 MORN3Q6PF18 240 aaPredicted RBP12.63□□□□□ -0.39
RETREG3-212ENST00000593251 TMEM230Q96A57 120 aa12.63□□□□□ -0.39
RETREG3-212ENST00000593251 GRAMD2BQ96HH9 432 aa12.63□□□□□ -0.39
RETREG3-212ENST00000593251 METTL26Q96S19 204 aa12.63□□□□□ -0.39
RETREG3-212ENST00000593251 TP53RKQ96S44 253 aa12.63□□□□□ -0.39
RETREG3-212ENST00000593251 COMMD3Q9UBI1 195 aa12.63□□□□□ -0.39
RETREG3-212ENST00000593251 PKHD1P08F94 4074 aa12.63□□□□□ -0.39
RETREG3-212ENST00000593251 RYR1P21817 5038 aa12.62□□□□□ -0.39
RETREG3-212ENST00000593251 SMIM31A0A1B0GVY4 71 aa12.62□□□□□ -0.39
RETREG3-212ENST00000593251 CLN5O75503 358 aa12.62□□□□□ -0.39
RETREG3-212ENST00000593251 P0C879 139 aa12.62□□□□□ -0.39
RETREG3-212ENST00000593251 PGAM2P15259 253 aa12.62□□□□□ -0.39
RETREG3-212ENST00000593251 CRYBB3P26998 211 aa12.62□□□□□ -0.39
RETREG3-212ENST00000593251 OPRK1P41145 380 aa12.62□□□□□ -0.39
RETREG3-212ENST00000593251 HOXA1P49639 335 aaPredicted RBP12.62□□□□□ -0.39
RETREG3-212ENST00000593251 AKR1C2P52895 323 aa12.62□□□□□ -0.39
RETREG3-212ENST00000593251 TIGITQ495A1 244 aa12.62□□□□□ -0.39
RETREG3-212ENST00000593251 TMEM41BQ5BJD5 291 aa12.62□□□□□ -0.39
RETREG3-212ENST00000593251 RNASE12Q5GAN4 147 aaKnown RBP12.62□□□□□ -0.39
RETREG3-212ENST00000593251 PVRIGQ6DKI7 326 aa12.62□□□□□ -0.39
RETREG3-212ENST00000593251 DCANP1Q8TF63 244 aa12.62□□□□□ -0.39
RETREG3-212ENST00000593251 RCVRNP35243 200 aa12.61□□□□□ -0.39
RETREG3-212ENST00000593251 SUB1P53999 127 aaKnown RBP eCLIP12.61□□□□□ -0.39
RETREG3-212ENST00000593251 CENPSQ8N2Z9 138 aa12.61□□□□□ -0.39
RETREG3-212ENST00000593251 CSNK1G2-AS1Q8NCQ2 148 aa12.61□□□□□ -0.39
RETREG3-212ENST00000593251 YIPF6Q96EC8 236 aa12.61□□□□□ -0.39
RETREG3-212ENST00000593251 PDCD10Q9BUL8 212 aa12.61□□□□□ -0.39
RETREG3-212ENST00000593251 SCRT1Q9BWW7 348 aa12.61□□□□□ -0.39
RETREG3-212ENST00000593251 SCPEP1Q9HB40 452 aa12.61□□□□□ -0.39
RETREG3-212ENST00000593251 TBC1D24Q9ULP9 559 aa12.61□□□□□ -0.39
RETREG3-212ENST00000593251 A0A1B0GVY2 172 aa12.6□□□□□ -0.39
RETREG3-212ENST00000593251 INS-IGF2F8WCM5 200 aa12.6□□□□□ -0.39
RETREG3-212ENST00000593251 CORTO00230 105 aa12.6□□□□□ -0.39
RETREG3-212ENST00000593251 PIGPP57054 158 aa12.6□□□□□ -0.39
RETREG3-212ENST00000593251 RND3P61587 244 aa12.6□□□□□ -0.39
RETREG3-212ENST00000593251 DHRS2Q13268 280 aa12.6□□□□□ -0.39
RETREG3-212ENST00000593251 KCTD21Q4G0X4 260 aa12.6□□□□□ -0.39
RETREG3-212ENST00000593251 LINC00336Q6ZUF6 198 aa12.6□□□□□ -0.39
RETREG3-212ENST00000593251 OR4X1Q8NH49 305 aa12.6□□□□□ -0.39
RETREG3-212ENST00000593251 RNF126Q9BV68 326 aa12.6□□□□□ -0.39
RETREG3-212ENST00000593251 DYNC1H1Q14204 4646 aaKnown RBP12.59□□□□□ -0.39
RETREG3-212ENST00000593251 DEFB131BA0A096LNP1 70 aa12.59□□□□□ -0.39
RETREG3-212ENST00000593251 A0A0G2JRQ6 117 aa12.59□□□□□ -0.39
RETREG3-212ENST00000593251 IGKV1-17P01599 117 aa12.59□□□□□ -0.39
RETREG3-212ENST00000593251 APOA1P02647 267 aa12.59□□□□□ -0.39
RETREG3-212ENST00000593251 C12orf74Q32Q52 190 aa12.59□□□□□ -0.39
RETREG3-212ENST00000593251 SP6Q3SY56 376 aa12.59□□□□□ -0.39
RETREG3-212ENST00000593251 PSMG4Q5JS54 123 aa12.59□□□□□ -0.39
RETREG3-212ENST00000593251 NARS2Q96I59 477 aaKnown RBP12.59□□□□□ -0.39
RETREG3-212ENST00000593251 RAB40CQ96S21 281 aa12.59□□□□□ -0.39
RETREG3-212ENST00000593251 ENY2Q9NPA8 101 aa12.59□□□□□ -0.39
RETREG3-212ENST00000593251 C3orf85A0A1B0GTC6 90 aa12.58□□□□□ -0.4
RETREG3-212ENST00000593251 M0R2N4 97 aa12.58□□□□□ -0.4
RETREG3-212ENST00000593251 ELK1P19419 428 aa12.58□□□□□ -0.4
RETREG3-212ENST00000593251 TRIM16LQ309B1 348 aa12.58□□□□□ -0.4
RETREG3-212ENST00000593251 PKD1P98161 4303 aa12.57□□□□□ -0.4
RETREG3-212ENST00000593251 HELTA6NFD8 242 aa12.57□□□□□ -0.4
RETREG3-212ENST00000593251 HPGDSO60760 199 aa12.57□□□□□ -0.4
RETREG3-212ENST00000593251 ATG12O94817 140 aa12.57□□□□□ -0.4
RETREG3-212ENST00000593251 LHFPL1Q86WI0 220 aa12.57□□□□□ -0.4
RETREG3-212ENST00000593251 ZNF486Q96H40 463 aaPredicted RBP12.57□□□□□ -0.4
RETREG3-212ENST00000593251 VCX3AQ9NNX9 186 aa12.57□□□□□ -0.4
RETREG3-212ENST00000593251 XCL2Q9UBD3 114 aa12.57□□□□□ -0.4
RETREG3-212ENST00000593251 KLK11Q9UBX7 282 aa12.57□□□□□ -0.4
RETREG3-212ENST00000593251 U3KQE9 123 aa12.57□□□□□ -0.4
RETREG3-212ENST00000593251 MUC4Q99102 2169 aa12.57□□□□□ -0.4
RETREG3-212ENST00000593251 SCGB2A1O75556 95 aa12.56□□□□□ -0.4
RETREG3-212ENST00000593251 AMBPP02760 352 aa12.56□□□□□ -0.4
RETREG3-212ENST00000593251 RPL5P46777 297 aaKnown RBP12.56□□□□□ -0.4
RETREG3-212ENST00000593251 NCS1P62166 190 aa12.56□□□□□ -0.4
RETREG3-212ENST00000593251 BSXQ3C1V8 233 aa12.56□□□□□ -0.4
RETREG3-212ENST00000593251 RNASE10Q5GAN6 216 aaKnown RBP12.56□□□□□ -0.4
RETREG3-212ENST00000593251 C16orf54Q6UWD8 224 aa12.56□□□□□ -0.4
RETREG3-212ENST00000593251 Q6ZRM9 215 aa12.56□□□□□ -0.4
RETREG3-212ENST00000593251 POM121L12Q8N7R1 296 aa12.56□□□□□ -0.4
RETREG3-212ENST00000593251 RNASE11Q8TAA1 199 aaKnown RBP12.56□□□□□ -0.4
RETREG3-212ENST00000593251 GLMPQ8WWB7 406 aa12.56□□□□□ -0.4
RETREG3-212ENST00000593251 PRSS29PA6NIE9 313 aa12.55□□□□□ -0.4
RETREG3-212ENST00000593251 RTL8CO15255 209 aa12.55□□□□□ -0.4
RETREG3-212ENST00000593251 CD3DP04234 171 aa12.55□□□□□ -0.4
RETREG3-212ENST00000593251 HNRNPCP07910 306 aaKnown RBP eCLIP12.55□□□□□ -0.42e-12■■■■□ 20
RETREG3-212ENST00000593251 RND2P52198 227 aa12.55□□□□□ -0.4
RETREG3-212ENST00000593251 RRNAD1Q96FB5 475 aaKnown RBP12.55□□□□□ -0.4
RETREG3-212ENST00000593251 NDUFAF3Q9BU61 184 aa12.55□□□□□ -0.4
RETREG3-212ENST00000593251 COPZ2Q9P299 210 aa12.55□□□□□ -0.4
RETREG3-212ENST00000593251 TRAV30A0A087WSZ9 112 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms