RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 SNRNP40Q96DI7 357 aaKnown RBP2.93□□□□□ -1.94
VMP1-216ENST00000592790 OTORQ9NRC9 128 aa2.93□□□□□ -1.94
VMP1-216ENST00000592790 LINC00312Q9Y6C7 94 aa2.93□□□□□ -1.94
VMP1-216ENST00000592790 COX11Q9Y6N1 276 aa2.93□□□□□ -1.94
VMP1-216ENST00000592790 MYO9BQ13459 2157 aa2.93□□□□□ -1.94
VMP1-216ENST00000592790 A0A1B0GUT8 65 aa2.93□□□□□ -1.94
VMP1-216ENST00000592790 A0A1W2PRS3 328 aa2.93□□□□□ -1.94
VMP1-216ENST00000592790 RRHO14718 337 aa2.93□□□□□ -1.94
VMP1-216ENST00000592790 TSPOP30536 169 aa2.93□□□□□ -1.94
VMP1-216ENST00000592790 CEBPDP49716 269 aaPredicted RBP2.93□□□□□ -1.94
VMP1-216ENST00000592790 RPL30P62888 115 aaKnown RBP2.93□□□□□ -1.94
VMP1-216ENST00000592790 KIAA1644Q3SXP7 199 aa2.93□□□□□ -1.94
VMP1-216ENST00000592790 TIMM23BQ5SRD1 257 aa2.93□□□□□ -1.94
VMP1-216ENST00000592790 C20orf204Q6ZNR8 217 aa2.93□□□□□ -1.94
VMP1-216ENST00000592790 ZNF826PQ6ZT77 177 aa2.93□□□□□ -1.94
VMP1-216ENST00000592790 TCF24Q7RTU0 167 aa2.93□□□□□ -1.94
VMP1-216ENST00000592790 C1orf210Q8IVY1 113 aa2.93□□□□□ -1.94
VMP1-216ENST00000592790 CIARTQ8N365 385 aaPredicted RBP2.93□□□□□ -1.94
VMP1-216ENST00000592790 OR9G1Q8NH87 305 aa2.93□□□□□ -1.94
VMP1-216ENST00000592790 SLC25A33Q9BSK2 321 aa2.93□□□□□ -1.94
VMP1-216ENST00000592790 ZNF492Q9P255 531 aa2.93□□□□□ -1.94
VMP1-216ENST00000592790 EPDR1Q9UM22 224 aa2.93□□□□□ -1.94
VMP1-216ENST00000592790 DOCK8Q8NF50 2099 aa2.93□□□□□ -1.94
VMP1-216ENST00000592790 CFAP47Q6ZTR5 3102 aa2.93□□□□□ -1.94
VMP1-216ENST00000592790 THADAQ6YHU6 1953 aa2.93□□□□□ -1.94
VMP1-216ENST00000592790 LRP4O75096 1905 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 A0A0G2JMM0 328 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 A0A1W2PPB8 328 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 KIR3DP1A8MWS1 328 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 C10orf142B7Z368 130 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 GHRHP01286 108 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 RBP4P02753 201 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 CLEC3BP05452 202 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 NBEAP1P0C6P0 100 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 C3orf79P0CE67 100 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 IGLC2P0DOY2 106 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 IGLC3P0DOY3 106 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 TDGF1P13385 188 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 REG1BP48304 166 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 LYZP61626 148 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 TNXAQ16473 311 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 C3AR1Q16581 482 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 POU2AF1Q16633 256 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 C3orf36Q3SXR2 165 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 SLC25A48Q6ZT89 311 aaKnown RBP2.92□□□□□ -1.94
VMP1-216ENST00000592790 NEUROG1Q92886 237 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 RPEQ96AT9 228 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 VCX2Q9H322 139 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 PROK2Q9HC23 129 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 ZNF355PQ9NSJ1 428 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 ZNF581Q9P0T4 197 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 SMPXQ9UHP9 88 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 RP1P56715 2156 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 FAM208BQ5VWN6 2430 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 PPIAL4EA0A075B759 164 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 SMIM27A0A1W2PRY6 76 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 A0A1W2PS18 150 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 A1L4Q6 167 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 TMEM189A5PLL7 270 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 HIGD1CA8MV81 97 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 PPIAL4DF5H284 164 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 CD5LO43866 347 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 IGKV1D-33P01593 117 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 IGKV1-33P01594 117 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 CD3EP07766 207 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 PPIAL4FP0DN26 164 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 GPR183P32249 361 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 NTF4P34130 210 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 VDAC2P45880 294 aaPredicted RBP2.92□□□□□ -1.94
VMP1-216ENST00000592790 SLC35B1P78383 322 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 MMDQ15546 238 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 PSG3Q16557 428 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 RSPO4Q2I0M5 234 aaPredicted RBP2.92□□□□□ -1.94
VMP1-216ENST00000592790 RPL39P5Q59GN2 51 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 TPTE2P1Q5T6R2 138 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 TMEM136Q6ZRR5 245 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 LINC00305Q7Z4B0 112 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 VASH2Q86V25 355 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 GUCD1Q96NT3 240 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 WNT10AQ9GZT5 417 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 RNASE7Q9H1E1 156 aaKnown RBP2.92□□□□□ -1.94
VMP1-216ENST00000592790 MAP1LC3AQ9H492 121 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 DEPPQ9NTK1 212 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 PPIAL4AQ9Y536 164 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 GON4LQ3T8J9 2241 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 ADAMTS9Q9P2N4 1935 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 NUDT3O95989 172 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 SAA2P0DJI9 122 aaPredicted RBP2.92□□□□□ -1.94
VMP1-216ENST00000592790 IGHV1-2P23083 117 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 CFHR2P36980 270 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 TCTAP57738 103 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 KLF5Q13887 457 aaPredicted RBP2.92□□□□□ -1.94
VMP1-216ENST00000592790 CDCP2Q5VXM1 449 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 VWA1Q6PCB0 445 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 Q6ZWC4 215 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 MOB3BQ86TA1 216 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 TPRX1Q8N7U7 411 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 ITLN1Q8WWA0 313 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 C5orf30Q96GV9 206 aa2.92□□□□□ -1.94
VMP1-216ENST00000592790 PGLYRP4Q96LB8 373 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms