RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 FAM201AQ5SY85 155 aa10.58□□□□□ -0.72
DNMT1-228ENST00000592705 FOXL2NBQ6ZUU3 175 aa10.58□□□□□ -0.72
DNMT1-228ENST00000592705 C11orf44Q8N8P7 122 aa10.58□□□□□ -0.72
DNMT1-228ENST00000592705 C5orf63A6NC05 138 aa10.57□□□□□ -0.72
DNMT1-228ENST00000592705 CXCL1P09341 107 aa10.57□□□□□ -0.72
DNMT1-228ENST00000592705 JOSD1Q15040 202 aaPredicted RBP10.57□□□□□ -0.72
DNMT1-228ENST00000592705 HIST3H2BBQ8N257 126 aa10.57□□□□□ -0.72
DNMT1-228ENST00000592705 OR52E5Q8NH55 327 aa10.57□□□□□ -0.72
DNMT1-228ENST00000592705 MRPL20Q9BYC9 149 aaKnown RBP10.57□□□□□ -0.72
DNMT1-228ENST00000592705 RPP21Q9H633 154 aaKnown RBP10.57□□□□□ -0.72
DNMT1-228ENST00000592705 TMEM238LA0A1B0GVL6 79 aa10.57□□□□□ -0.72
DNMT1-228ENST00000592705 A6NJY4 79 aa10.57□□□□□ -0.72
DNMT1-228ENST00000592705 IL4P05112 153 aa10.57□□□□□ -0.72
DNMT1-228ENST00000592705 DUTP33316 252 aaKnown RBP10.57□□□□□ -0.72
DNMT1-228ENST00000592705 C21orf62-AS1Q17RA5 79 aa10.57□□□□□ -0.72
DNMT1-228ENST00000592705 LEMD1Q68G75 181 aa10.57□□□□□ -0.72
DNMT1-228ENST00000592705 Q6ZS49 121 aa10.57□□□□□ -0.72
DNMT1-228ENST00000592705 MDS2Q8NDY4 140 aa10.57□□□□□ -0.72
DNMT1-228ENST00000592705 MIEN1Q9BRT3 115 aa10.57□□□□□ -0.72
DNMT1-228ENST00000592705 RALGAPA1Q6GYQ0 2036 aa10.57□□□□□ -0.72
DNMT1-228ENST00000592705 ADMP35318 185 aa10.57□□□□□ -0.72
DNMT1-228ENST00000592705 Q0VFX4 171 aa10.57□□□□□ -0.72
DNMT1-228ENST00000592705 FOXF2Q12947 444 aa10.57□□□□□ -0.72
DNMT1-228ENST00000592705 ARHGEF17Q96PE2 2063 aaPredicted RBP10.57□□□□□ -0.72
DNMT1-228ENST00000592705 TRBV6-6A0A0A6YYG2 114 aa10.57□□□□□ -0.72
DNMT1-228ENST00000592705 SERF1AO75920 110 aa10.57□□□□□ -0.72
DNMT1-228ENST00000592705 NPPCP23582 126 aa10.57□□□□□ -0.72
DNMT1-228ENST00000592705 PRR30Q53SZ7 412 aaPredicted RBP10.57□□□□□ -0.72
DNMT1-228ENST00000592705 Q96MF0 132 aa10.57□□□□□ -0.72
DNMT1-228ENST00000592705 GTSCR1Q86UQ5 136 aa10.56□□□□□ -0.72
DNMT1-228ENST00000592705 EAF1Q96JC9 268 aaPredicted RBP10.56□□□□□ -0.72
DNMT1-228ENST00000592705 HIST1H2BLQ99880 126 aa10.56□□□□□ -0.72
DNMT1-228ENST00000592705 OSTCQ9NRP0 149 aa10.56□□□□□ -0.72
DNMT1-228ENST00000592705 LYNX1G3V0Z9 82 aa10.56□□□□□ -0.72
DNMT1-228ENST00000592705 LYNX1P0DP58 116 aa10.56□□□□□ -0.72
DNMT1-228ENST00000592705 CX3CL1P78423 397 aa10.56□□□□□ -0.72
DNMT1-228ENST00000592705 WNT10AQ9GZT5 417 aa10.56□□□□□ -0.72
DNMT1-228ENST00000592705 LOC102724200A0A096LPH7 203 aaPredicted RBP10.56□□□□□ -0.72
DNMT1-228ENST00000592705 A0A1B0GW15 77 aa10.56□□□□□ -0.72
DNMT1-228ENST00000592705 OR9G9P0C7N8 305 aa10.56□□□□□ -0.72
DNMT1-228ENST00000592705 SAA1P0DJI8 122 aaPredicted RBP10.56□□□□□ -0.72
DNMT1-228ENST00000592705 FOXA3P55318 350 aaPredicted RBP10.56□□□□□ -0.72
DNMT1-228ENST00000592705 A6NNC1 897 aa10.56□□□□□ -0.72
DNMT1-228ENST00000592705 ADCYAP1P18509 176 aa10.56□□□□□ -0.72
DNMT1-228ENST00000592705 MBD3L4A6NDZ8 208 aaPredicted RBP10.55□□□□□ -0.72
DNMT1-228ENST00000592705 MBD3L3A6NE82 208 aaPredicted RBP10.55□□□□□ -0.72
DNMT1-228ENST00000592705 MBD3L5A6NJ08 208 aaPredicted RBP10.55□□□□□ -0.72
DNMT1-228ENST00000592705 CD33P20138 364 aa10.55□□□□□ -0.72
DNMT1-228ENST00000592705 IGFL3Q6UXB1 125 aa10.55□□□□□ -0.72
DNMT1-228ENST00000592705 ASCL4Q6XD76 172 aa10.55□□□□□ -0.72
DNMT1-228ENST00000592705 MBD3L2Q8NHZ7 208 aaPredicted RBP10.55□□□□□ -0.72
DNMT1-228ENST00000592705 A0A1W2PRE2 83 aa10.55□□□□□ -0.72
DNMT1-228ENST00000592705 C2orf83Q53S99 150 aa10.55□□□□□ -0.72
DNMT1-228ENST00000592705 TCF23Q7RTU1 214 aa10.55□□□□□ -0.72
DNMT1-228ENST00000592705 LINC00469Q8N7U9 141 aa10.55□□□□□ -0.72
DNMT1-228ENST00000592705 USF3Q68DE3 2245 aa10.55□□□□□ -0.72
DNMT1-228ENST00000592705 DOCK8Q8NF50 2099 aa10.55□□□□□ -0.72
DNMT1-228ENST00000592705 IGKV1D-33P01593 117 aa10.55□□□□□ -0.72
DNMT1-228ENST00000592705 IGKV1-33P01594 117 aa10.55□□□□□ -0.72
DNMT1-228ENST00000592705 GATA2P23769 480 aaPredicted RBP10.55□□□□□ -0.72
DNMT1-228ENST00000592705 DNLZQ5SXM8 178 aa10.55□□□□□ -0.72
DNMT1-228ENST00000592705 ZNF600Q6ZNG1 722 aa10.55□□□□□ -0.72
DNMT1-228ENST00000592705 TEX45Q8NA69 505 aa10.55□□□□□ -0.72
DNMT1-228ENST00000592705 CLDN16Q9Y5I7 305 aa10.55□□□□□ -0.72
DNMT1-228ENST00000592705 NUDT3O95989 172 aa10.54□□□□□ -0.72
DNMT1-228ENST00000592705 EFNB3Q15768 340 aa10.54□□□□□ -0.72
DNMT1-228ENST00000592705 OCC1Q8TAD7 63 aa10.54□□□□□ -0.72
DNMT1-228ENST00000592705 GPR82Q96P67 336 aa10.54□□□□□ -0.72
DNMT1-228ENST00000592705 PLXNA4Q9HCM2 1894 aa10.54□□□□□ -0.72
DNMT1-228ENST00000592705 A0A1B0GUT8 65 aa10.54□□□□□ -0.72
DNMT1-228ENST00000592705 PRCDQ00LT1 54 aa10.54□□□□□ -0.72
DNMT1-228ENST00000592705 Q6AWC8 147 aa10.54□□□□□ -0.72
DNMT1-228ENST00000592705 TEX38Q6PEX7 206 aa10.54□□□□□ -0.72
DNMT1-228ENST00000592705 NRN1Q9NPD7 142 aa10.54□□□□□ -0.72
DNMT1-228ENST00000592705 GCSHP23434 173 aa10.54□□□□□ -0.72
DNMT1-228ENST00000592705 TMEM14EPQ6UXP3 125 aa10.54□□□□□ -0.72
DNMT1-228ENST00000592705 ERASQ7Z444 233 aa10.54□□□□□ -0.72
DNMT1-228ENST00000592705 PPP1R27Q86WC6 154 aa10.54□□□□□ -0.72
DNMT1-228ENST00000592705 ZNF502Q8TBZ5 544 aa10.54□□□□□ -0.72
DNMT1-228ENST00000592705 GNB1LQ9BYB4 327 aa10.54□□□□□ -0.72
DNMT1-228ENST00000592705 RNASE7Q9H1E1 156 aaKnown RBP10.54□□□□□ -0.72
DNMT1-228ENST00000592705 ANAPC10Q9UM13 185 aa10.54□□□□□ -0.72
DNMT1-228ENST00000592705 IGKV1-5P01602 117 aa10.54□□□□□ -0.72
DNMT1-228ENST00000592705 PRB1P04280 392 aa10.54□□□□□ -0.72
DNMT1-228ENST00000592705 MYOD1P15172 320 aa10.54□□□□□ -0.72
DNMT1-228ENST00000592705 MDC1Q14676 2089 aaKnown RBP10.53□□□□□ -0.72
DNMT1-228ENST00000592705 M0R3E3 92 aa10.53□□□□□ -0.72
DNMT1-228ENST00000592705 WNT2P09544 360 aa10.53□□□□□ -0.72
DNMT1-228ENST00000592705 RNF224P0DH78 156 aa10.53□□□□□ -0.72
DNMT1-228ENST00000592705 ZCCHC24Q8N2G6 241 aaKnown RBP10.53□□□□□ -0.72
DNMT1-228ENST00000592705 AGMATQ9BSE5 352 aa10.53□□□□□ -0.72
DNMT1-228ENST00000592705 CGB1A6NKQ9 187 aa10.53□□□□□ -0.72
DNMT1-228ENST00000592705 IGHG3P01860 377 aa10.53□□□□□ -0.72
DNMT1-228ENST00000592705 FOXG1P55316 489 aaPredicted RBP10.53□□□□□ -0.72
DNMT1-228ENST00000592705 SYT8Q8NBV8 401 aa10.53□□□□□ -0.72
DNMT1-228ENST00000592705 ITLN2Q8WWU7 325 aaPredicted RBP10.53□□□□□ -0.72
DNMT1-228ENST00000592705 FBXL15Q9H469 300 aa10.53□□□□□ -0.72
DNMT1-228ENST00000592705 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.53□□□□□ -0.728e-7■■■■■ 27.5
DNMT1-228ENST00000592705 MST1LQ2TV78 715 aa10.53□□□□□ -0.72
DNMT1-228ENST00000592705 OR10J3Q5JRS4 329 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms