RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 SCAF4O95104 1147 aaKnown RBP11.81□□□□□ -0.52
LIG3-215ENST00000592690 CD7P09564 240 aa11.81□□□□□ -0.52
LIG3-215ENST00000592690 NHLRC4P0CG21 123 aaPredicted RBP11.81□□□□□ -0.52
LIG3-215ENST00000592690 OPRK1P41145 380 aa11.81□□□□□ -0.52
LIG3-215ENST00000592690 HTR2BP41595 481 aa11.81□□□□□ -0.52
LIG3-215ENST00000592690 RELQ04864 619 aaPredicted RBP11.81□□□□□ -0.52
LIG3-215ENST00000592690 LRTM2Q8N967 370 aa11.81□□□□□ -0.52
LIG3-215ENST00000592690 DUSP18Q8NEJ0 188 aa11.81□□□□□ -0.52
LIG3-215ENST00000592690 SLC24A4Q8NFF2 622 aa11.81□□□□□ -0.52
LIG3-215ENST00000592690 NEURL2Q9BR09 285 aa11.81□□□□□ -0.52
LIG3-215ENST00000592690 WFDC10AQ9H1F0 79 aa11.81□□□□□ -0.52
LIG3-215ENST00000592690 HSPB7Q9UBY9 170 aa11.81□□□□□ -0.52
LIG3-215ENST00000592690 A0A1B0GU03 582 aa11.8□□□□□ -0.52
LIG3-215ENST00000592690 A6NHS1 94 aa11.8□□□□□ -0.52
LIG3-215ENST00000592690 NPBWR1P48145 328 aa11.8□□□□□ -0.52
LIG3-215ENST00000592690 CNPY1Q3B7I2 92 aa11.8□□□□□ -0.52
LIG3-215ENST00000592690 C2orf83Q53S99 150 aa11.8□□□□□ -0.52
LIG3-215ENST00000592690 OR1S1Q8NH92 325 aa11.8□□□□□ -0.52
LIG3-215ENST00000592690 C7orf50Q9BRJ6 194 aaKnown RBP11.8□□□□□ -0.52
LIG3-215ENST00000592690 RBKSQ9H477 322 aa11.8□□□□□ -0.52
LIG3-215ENST00000592690 U3KQK5 164 aa11.8□□□□□ -0.52
LIG3-215ENST00000592690 HUWE1Q7Z6Z7 4374 aaKnown RBP11.8□□□□□ -0.52
LIG3-215ENST00000592690 C15orf62A8K5M9 175 aa11.79□□□□□ -0.52
LIG3-215ENST00000592690 CENPXA8MT69 81 aa11.79□□□□□ -0.52
LIG3-215ENST00000592690 K7EMT4 169 aa11.79□□□□□ -0.52
LIG3-215ENST00000592690 PLA2G10O15496 165 aa11.79□□□□□ -0.52
LIG3-215ENST00000592690 PITX3O75364 302 aa11.79□□□□□ -0.52
LIG3-215ENST00000592690 YIF1AO95070 293 aa11.79□□□□□ -0.52
LIG3-215ENST00000592690 TMEM50AO95807 157 aa11.79□□□□□ -0.52
LIG3-215ENST00000592690 UBE2MP61081 183 aaKnown RBP11.79□□□□□ -0.52
LIG3-215ENST00000592690 HIPK2Q9H2X6 1198 aa11.79□□□□□ -0.52
LIG3-215ENST00000592690 CACFD1Q9UGQ2 172 aa11.79□□□□□ -0.52
LIG3-215ENST00000592690 IGHV3-49A0A0A0MS15 119 aa11.78□□□□□ -0.52
LIG3-215ENST00000592690 PIGBOS1A0A0B4J2F0 54 aa11.78□□□□□ -0.52
LIG3-215ENST00000592690 C9orf170A2RU37 121 aa11.78□□□□□ -0.52
LIG3-215ENST00000592690 CLN5O75503 358 aa11.78□□□□□ -0.52
LIG3-215ENST00000592690 HOXB5P09067 269 aa11.78□□□□□ -0.52
LIG3-215ENST00000592690 ANXA7P20073 488 aaKnown RBP11.78□□□□□ -0.52
LIG3-215ENST00000592690 NPY1RP25929 384 aa11.78□□□□□ -0.52
LIG3-215ENST00000592690 TOMM20LQ6UXN7 152 aa11.78□□□□□ -0.52
LIG3-215ENST00000592690 OR4X1Q8NH49 305 aa11.78□□□□□ -0.52
LIG3-215ENST00000592690 DTD1Q8TEA8 209 aa11.78□□□□□ -0.52
LIG3-215ENST00000592690 OR10C1Q96KK4 312 aa11.78□□□□□ -0.52
LIG3-215ENST00000592690 ZFAND3Q9H8U3 227 aa11.78□□□□□ -0.52
LIG3-215ENST00000592690 TRAV25A0A0B4J276 109 aa11.77□□□□□ -0.53
LIG3-215ENST00000592690 IGHV7-4-1A0A0J9YVY3 117 aa11.77□□□□□ -0.53
LIG3-215ENST00000592690 GGNBP1Q5YKI7 109 aa11.77□□□□□ -0.53
LIG3-215ENST00000592690 ZNF600Q6ZNG1 722 aa11.77□□□□□ -0.53
LIG3-215ENST00000592690 RBPMS2Q6ZRY4 209 aaKnown RBP11.77□□□□□ -0.53
LIG3-215ENST00000592690 DEFB125Q8N687 156 aa11.77□□□□□ -0.53
LIG3-215ENST00000592690 OR52B4Q8NGK2 314 aa11.77□□□□□ -0.53
LIG3-215ENST00000592690 RNASEH2CQ8TDP1 164 aaKnown RBP11.77□□□□□ -0.53
LIG3-215ENST00000592690 TUBA4BQ9H853 241 aa11.77□□□□□ -0.53
LIG3-215ENST00000592690 SMPXQ9UHP9 88 aa11.77□□□□□ -0.53
LIG3-215ENST00000592690 TMED3Q9Y3Q3 217 aa11.77□□□□□ -0.53
LIG3-215ENST00000592690 PUS1Q9Y606 427 aaKnown RBP eCLIP11.77□□□□□ -0.53
LIG3-215ENST00000592690 TENM3Q9P273 2699 aa11.77□□□□□ -0.53
LIG3-215ENST00000592690 IGHV3OR16-13A0A075B7E8 117 aa11.76□□□□□ -0.53
LIG3-215ENST00000592690 IGHV3-74A0A0B4J1X5 117 aa11.76□□□□□ -0.53
LIG3-215ENST00000592690 RPS10-NUDT3A0A1W2PQS6 291 aa11.76□□□□□ -0.53
LIG3-215ENST00000592690 OR11H12B2RN74 326 aa11.76□□□□□ -0.53
LIG3-215ENST00000592690 LYRM1O43325 122 aa11.76□□□□□ -0.53
LIG3-215ENST00000592690 IFNA10P01566 189 aa11.76□□□□□ -0.53
LIG3-215ENST00000592690 OR4E1P0C645 316 aa11.76□□□□□ -0.53
LIG3-215ENST00000592690 SLC25A6P12236 298 aa11.76□□□□□ -0.53
LIG3-215ENST00000592690 RND2P52198 227 aa11.76□□□□□ -0.53
LIG3-215ENST00000592690 DHRS2Q13268 280 aa11.76□□□□□ -0.53
LIG3-215ENST00000592690 TIGITQ495A1 244 aa11.76□□□□□ -0.53
LIG3-215ENST00000592690 PRSS54Q6PEW0 395 aa11.76□□□□□ -0.53
LIG3-215ENST00000592690 LYG2Q86SG7 212 aa11.76□□□□□ -0.53
LIG3-215ENST00000592690 TMEM116Q8NCL8 245 aa11.76□□□□□ -0.53
LIG3-215ENST00000592690 RHPN1-AS1Q9BWJ2 59 aa11.76□□□□□ -0.53
LIG3-215ENST00000592690 U3KQ87 197 aa11.76□□□□□ -0.53
LIG3-215ENST00000592690 TRAV14DV4A0A0A6YYC5 116 aa11.75□□□□□ -0.53
LIG3-215ENST00000592690 CHEK1O14757 476 aa11.75□□□□□ -0.53
LIG3-215ENST00000592690 ADAP1O75689 374 aa11.75□□□□□ -0.53
LIG3-215ENST00000592690 IGKV1-17P01599 117 aa11.75□□□□□ -0.53
LIG3-215ENST00000592690 IAPPP10997 89 aa11.75□□□□□ -0.53
LIG3-215ENST00000592690 SLC25A4P12235 298 aa11.75□□□□□ -0.53
LIG3-215ENST00000592690 HAGHQ16775 308 aa11.75□□□□□ -0.53
LIG3-215ENST00000592690 LINC00299Q6ZSB3 139 aa11.75□□□□□ -0.53
LIG3-215ENST00000592690 SLC16A13Q7RTY0 426 aa11.75□□□□□ -0.53
LIG3-215ENST00000592690 RCHY1Q96PM5 261 aa11.75□□□□□ -0.53
LIG3-215ENST00000592690 RNF2Q99496 336 aa11.75□□□□□ -0.53
LIG3-215ENST00000592690 SPAG8Q99932 426 aaPredicted RBP11.75□□□□□ -0.53
LIG3-215ENST00000592690 TM2D3Q9BRN9 247 aa11.75□□□□□ -0.53
LIG3-215ENST00000592690 CCDC32Q9BV29 185 aa11.75□□□□□ -0.53
LIG3-215ENST00000592690 C20orf85Q9H1P6 137 aa11.75□□□□□ -0.53
LIG3-215ENST00000592690 SRD5A3Q9H8P0 318 aa11.75□□□□□ -0.53
LIG3-215ENST00000592690 RBMY1BA6NDE4 496 aaKnown RBP11.74□□□□□ -0.53
LIG3-215ENST00000592690 RBMY1EA6NEQ0 496 aaKnown RBP11.74□□□□□ -0.53
LIG3-215ENST00000592690 MPTX1A8MV57 137 aa11.74□□□□□ -0.53
LIG3-215ENST00000592690 FAM90A26D6RGX4 464 aa11.74□□□□□ -0.53
LIG3-215ENST00000592690 TSPAN4O14817 238 aa11.74□□□□□ -0.53
LIG3-215ENST00000592690 APOHP02749 345 aaPredicted RBP11.74□□□□□ -0.53
LIG3-215ENST00000592690 RBMY1DP0C7P1 496 aaKnown RBP11.74□□□□□ -0.53
LIG3-215ENST00000592690 IGLC1P0CG04 106 aa11.74□□□□□ -0.53
LIG3-215ENST00000592690 C4orf46Q504U0 113 aa11.74□□□□□ -0.53
LIG3-215ENST00000592690 LAMTOR1Q6IAA8 161 aa11.74□□□□□ -0.53
LIG3-215ENST00000592690 LINC00322Q6ZN03 302 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms