RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	AMBP	P02760	352 aa		13.17	□□□□□ -0.3
CIRBP-238	ENST00000592412	SPP1	P10451	314 aa		13.17	□□□□□ -0.3
CIRBP-238	ENST00000592412	HRH1	P35367	487 aa		13.17	□□□□□ -0.3
CIRBP-238	ENST00000592412	NPBWR1	P48145	328 aa		13.17	□□□□□ -0.3
CIRBP-238	ENST00000592412	ALDH3B2	P48448	385 aa		13.17	□□□□□ -0.3
CIRBP-238	ENST00000592412	TAS2R20	P59543	309 aa		13.17	□□□□□ -0.3
CIRBP-238	ENST00000592412	C12orf74	Q32Q52	190 aa		13.17	□□□□□ -0.3
CIRBP-238	ENST00000592412	GPR107	Q5VW38	600 aa		13.17	□□□□□ -0.3
CIRBP-238	ENST00000592412	OR6F1	Q8NGZ6	308 aa		13.17	□□□□□ -0.3
CIRBP-238	ENST00000592412	OR4A16	Q8NH70	328 aa		13.17	□□□□□ -0.3
CIRBP-238	ENST00000592412	DCANP1	Q8TF63	244 aa		13.17	□□□□□ -0.3
CIRBP-238	ENST00000592412	NAA50	Q9GZZ1	169 aa	Known RBP	13.17	□□□□□ -0.3
CIRBP-238	ENST00000592412	LRP1B	Q9NZR2	4599 aa		13.16	□□□□□ -0.3
CIRBP-238	ENST00000592412	ZNF688	P0C7X2	276 aa		13.16	□□□□□ -0.3
CIRBP-238	ENST00000592412	PPP5C	P53041	499 aa		13.16	□□□□□ -0.3
CIRBP-238	ENST00000592412	TAS2R46	P59540	309 aa		13.16	□□□□□ -0.3
CIRBP-238	ENST00000592412	TMEM41B	Q5BJD5	291 aa		13.16	□□□□□ -0.3
CIRBP-238	ENST00000592412	MORN3	Q6PF18	240 aa	Predicted RBP	13.16	□□□□□ -0.3
CIRBP-238	ENST00000592412	ZNF767P	Q75MW2	155 aa		13.16	□□□□□ -0.3
CIRBP-238	ENST00000592412	H2BFWT	Q7Z2G1	175 aa		13.16	□□□□□ -0.3
CIRBP-238	ENST00000592412	GRAMD2B	Q96HH9	432 aa		13.16	□□□□□ -0.3
CIRBP-238	ENST00000592412	PRSS29P	A6NIE9	313 aa		13.15	□□□□□ -0.3
CIRBP-238	ENST00000592412	GABARAP	O95166	117 aa		13.15	□□□□□ -0.3
CIRBP-238	ENST00000592412	CRYBB3	P26998	211 aa		13.15	□□□□□ -0.3
CIRBP-238	ENST00000592412	HLA-DMA	P28067	261 aa		13.15	□□□□□ -0.3
CIRBP-238	ENST00000592412	ERH	P84090	104 aa	Known RBP	13.15	□□□□□ -0.3
CIRBP-238	ENST00000592412	CTF1	Q16619	201 aa		13.15	□□□□□ -0.3
CIRBP-238	ENST00000592412	POM121L12	Q8N7R1	296 aa		13.15	□□□□□ -0.3
CIRBP-238	ENST00000592412	STXBP6	Q8NFX7	210 aa		13.15	□□□□□ -0.3
CIRBP-238	ENST00000592412	S100A16	Q96FQ6	103 aa	Known RBP	13.15	□□□□□ -0.3
CIRBP-238	ENST00000592412	FNDC4	Q9H6D8	234 aa	Predicted RBP	13.15	□□□□□ -0.3
CIRBP-238	ENST00000592412	TBC1D24	Q9ULP9	559 aa		13.15	□□□□□ -0.3
CIRBP-238	ENST00000592412	INS-IGF2	F8WCM5	200 aa		13.14	□□□□□ -0.31
CIRBP-238	ENST00000592412		P0C879	139 aa		13.14	□□□□□ -0.31
CIRBP-238	ENST00000592412	P2RY1	P47900	373 aa		13.14	□□□□□ -0.31
CIRBP-238	ENST00000592412	UBE2NL	Q5JXB2	153 aa		13.14	□□□□□ -0.31
CIRBP-238	ENST00000592412	TMEM69	Q5SWH9	247 aa		13.14	□□□□□ -0.31
CIRBP-238	ENST00000592412	KRTAP4-5	Q9BYR2	181 aa		13.14	□□□□□ -0.31
CIRBP-238	ENST00000592412	DEFB131B	A0A096LNP1	70 aa		13.13	□□□□□ -0.31
CIRBP-238	ENST00000592412		A0A0B4J293	547 aa		13.13	□□□□□ -0.31
CIRBP-238	ENST00000592412		M0R2N4	97 aa		13.13	□□□□□ -0.31
CIRBP-238	ENST00000592412	IGKV1-5	P01602	117 aa		13.13	□□□□□ -0.31
CIRBP-238	ENST00000592412	RNASE2	P10153	161 aa	Known RBP	13.13	□□□□□ -0.31
CIRBP-238	ENST00000592412	NPPC	P23582	126 aa		13.13	□□□□□ -0.31
CIRBP-238	ENST00000592412	MLANA	Q16655	118 aa		13.13	□□□□□ -0.31
CIRBP-238	ENST00000592412	ACTL10	Q5JWF8	245 aa		13.13	□□□□□ -0.31
CIRBP-238	ENST00000592412	SAMD12	Q8N8I0	201 aa		13.13	□□□□□ -0.31
CIRBP-238	ENST00000592412	TMEM231	Q9H6L2	316 aa		13.13	□□□□□ -0.31
CIRBP-238	ENST00000592412	IGKV1-17	P01599	117 aa		13.12	□□□□□ -0.31
CIRBP-238	ENST00000592412	PRSS3	P35030	304 aa		13.12	□□□□□ -0.31
CIRBP-238	ENST00000592412	RORC	P51449	518 aa		13.12	□□□□□ -0.31
CIRBP-238	ENST00000592412	CLVS1	Q8IUQ0	354 aa	Predicted RBP	13.12	□□□□□ -0.31
CIRBP-238	ENST00000592412	GPX8	Q8TED1	209 aa		13.12	□□□□□ -0.31
CIRBP-238	ENST00000592412		A0A1W2PS18	150 aa		13.11	□□□□□ -0.31
CIRBP-238	ENST00000592412	CLN5	O75503	358 aa		13.11	□□□□□ -0.31
CIRBP-238	ENST00000592412	RPL5	P46777	297 aa	Known RBP	13.11	□□□□□ -0.31
CIRBP-238	ENST00000592412	UCP3	P55916	312 aa		13.11	□□□□□ -0.31
CIRBP-238	ENST00000592412	LPCAT3	Q6P1A2	487 aa		13.11	□□□□□ -0.31
CIRBP-238	ENST00000592412	METTL26	Q96S19	204 aa		13.11	□□□□□ -0.31
CIRBP-238	ENST00000592412	COMMD3	Q9UBI1	195 aa		13.11	□□□□□ -0.31
CIRBP-238	ENST00000592412		U3KQE9	123 aa		13.11	□□□□□ -0.31
CIRBP-238	ENST00000592412		P0DMU3	169 aa		13.1	□□□□□ -0.31
CIRBP-238	ENST00000592412	FAM231A	P0DMU4	169 aa		13.1	□□□□□ -0.31
CIRBP-238	ENST00000592412	FAM231C	P0DMU5	169 aa		13.1	□□□□□ -0.31
CIRBP-238	ENST00000592412	SNCA	P37840	140 aa		13.1	□□□□□ -0.31
CIRBP-238	ENST00000592412	OR4X1	Q8NH49	305 aa		13.1	□□□□□ -0.31
CIRBP-238	ENST00000592412	RAB40C	Q96S21	281 aa		13.1	□□□□□ -0.31
CIRBP-238	ENST00000592412	TSPAN5	P62079	268 aa		13.09	□□□□□ -0.31
CIRBP-238	ENST00000592412	LGALS9B	Q3B8N2	356 aa		13.09	□□□□□ -0.31
CIRBP-238	ENST00000592412	BSX	Q3C1V8	233 aa		13.09	□□□□□ -0.31
CIRBP-238	ENST00000592412	TIGIT	Q495A1	244 aa		13.09	□□□□□ -0.31
CIRBP-238	ENST00000592412	SLC35G3	Q8N808	338 aa		13.09	□□□□□ -0.31
CIRBP-238	ENST00000592412	RAB2B	Q8WUD1	216 aa		13.09	□□□□□ -0.31
CIRBP-238	ENST00000592412	GLMP	Q8WWB7	406 aa		13.09	□□□□□ -0.31
CIRBP-238	ENST00000592412	TP53RK	Q96S44	253 aa		13.09	□□□□□ -0.31
CIRBP-238	ENST00000592412	NDUFAF3	Q9BU61	184 aa		13.09	□□□□□ -0.31
CIRBP-238	ENST00000592412	S100G	P29377	79 aa		13.08	□□□□□ -0.32
CIRBP-238	ENST00000592412	ETV6	P41212	452 aa		13.08	□□□□□ -0.32
CIRBP-238	ENST00000592412	DHRS2	Q13268	280 aa		13.08	□□□□□ -0.32
CIRBP-238	ENST00000592412	PSMG4	Q5JS54	123 aa		13.08	□□□□□ -0.32
CIRBP-238	ENST00000592412	AP3S1	Q92572	193 aa		13.08	□□□□□ -0.32
CIRBP-238	ENST00000592412	APOB	P04114	4563 aa	Known RBP	13.08	□□□□□ -0.32
CIRBP-238	ENST00000592412		A0A0G2JRQ6	117 aa		13.07	□□□□□ -0.32
CIRBP-238	ENST00000592412	NOL3	O60936	208 aa	Known RBP	13.07	□□□□□ -0.32
CIRBP-238	ENST00000592412	APOA1	P02647	267 aa		13.07	□□□□□ -0.32
CIRBP-238	ENST00000592412	CD74	P04233	296 aa		13.07	□□□□□ -0.32
CIRBP-238	ENST00000592412	ZNF182	P17025	639 aa	Predicted RBP	13.07	□□□□□ -0.32
CIRBP-238	ENST00000592412	PI3	P19957	117 aa		13.07	□□□□□ -0.32
CIRBP-238	ENST00000592412	OPRK1	P41145	380 aa		13.07	□□□□□ -0.32
CIRBP-238	ENST00000592412	TMBIM6	P55061	237 aa		13.07	□□□□□ -0.32
CIRBP-238	ENST00000592412	RND3	P61587	244 aa		13.07	□□□□□ -0.32
CIRBP-238	ENST00000592412	SPCS2	Q15005	226 aa		13.07	□□□□□ -0.32
CIRBP-238	ENST00000592412	MZT2A	Q6P582	158 aa		13.07	□□□□□ -0.32
CIRBP-238	ENST00000592412	C16orf54	Q6UWD8	224 aa		13.07	□□□□□ -0.32
CIRBP-238	ENST00000592412		Q6ZR54	194 aa		13.07	□□□□□ -0.32
CIRBP-238	ENST00000592412	CENPS	Q8N2Z9	138 aa		13.07	□□□□□ -0.32
CIRBP-238	ENST00000592412	TMEM230	Q96A57	120 aa		13.07	□□□□□ -0.32
CIRBP-238	ENST00000592412	XCL2	Q9UBD3	114 aa		13.07	□□□□□ -0.32
CIRBP-238	ENST00000592412	HELT	A6NFD8	242 aa		13.06	□□□□□ -0.32
CIRBP-238	ENST00000592412		M0QYG6	137 aa		13.06	□□□□□ -0.32

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