RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 CTSGP08311 255 aa10.51□□□□□ -0.73
CLIP3-205ENST00000592017 HOXB5P09067 269 aa10.51□□□□□ -0.73
CLIP3-205ENST00000592017 NPBWR1P48145 328 aa10.51□□□□□ -0.73
CLIP3-205ENST00000592017 WDR89Q96FK6 387 aaPredicted RBP10.51□□□□□ -0.73
CLIP3-205ENST00000592017 TXN2Q99757 166 aa10.51□□□□□ -0.73
CLIP3-205ENST00000592017 HIPK2Q9H2X6 1198 aa10.51□□□□□ -0.73
CLIP3-205ENST00000592017 RBKSQ9H477 322 aa10.51□□□□□ -0.73
CLIP3-205ENST00000592017 DAZ1Q9NQZ3 744 aaKnown RBP10.51□□□□□ -0.73
CLIP3-205ENST00000592017 CACFD1Q9UGQ2 172 aa10.51□□□□□ -0.73
CLIP3-205ENST00000592017 A0A1B0GU03 582 aa10.5□□□□□ -0.73
CLIP3-205ENST00000592017 LYRM1O43325 122 aa10.5□□□□□ -0.73
CLIP3-205ENST00000592017 IFNA10P01566 189 aa10.5□□□□□ -0.73
CLIP3-205ENST00000592017 IGHV4-30-4P0DP06 118 aa10.5□□□□□ -0.73
CLIP3-205ENST00000592017 ANXA7P20073 488 aaKnown RBP10.5□□□□□ -0.73
CLIP3-205ENST00000592017 NPY1RP25929 384 aa10.5□□□□□ -0.73
CLIP3-205ENST00000592017 ELLP55199 621 aaPredicted RBP10.5□□□□□ -0.73
CLIP3-205ENST00000592017 CD81P60033 236 aa10.5□□□□□ -0.73
CLIP3-205ENST00000592017 UBE2MP61081 183 aaKnown RBP10.5□□□□□ -0.73
CLIP3-205ENST00000592017 BSXQ3C1V8 233 aa10.5□□□□□ -0.73
CLIP3-205ENST00000592017 C4orf46Q504U0 113 aa10.5□□□□□ -0.73
CLIP3-205ENST00000592017 TMEM61Q8N0U2 210 aa10.5□□□□□ -0.73
CLIP3-205ENST00000592017 DTD1Q8TEA8 209 aa10.5□□□□□ -0.73
CLIP3-205ENST00000592017 MARC2Q969Z3 335 aa10.5□□□□□ -0.73
CLIP3-205ENST00000592017 CCDC32Q9BV29 185 aa10.5□□□□□ -0.73
CLIP3-205ENST00000592017 FNDC4Q9H6D8 234 aaPredicted RBP10.5□□□□□ -0.73
CLIP3-205ENST00000592017 MRPL27Q9P0M9 148 aaKnown RBP10.5□□□□□ -0.73
CLIP3-205ENST00000592017 HSPB7Q9UBY9 170 aa10.5□□□□□ -0.73
CLIP3-205ENST00000592017 RPS10-NUDT3A0A1W2PQS6 291 aa10.49□□□□□ -0.73
CLIP3-205ENST00000592017 C9orf170A2RU37 121 aa10.49□□□□□ -0.73
CLIP3-205ENST00000592017 PLA2G10O15496 165 aa10.49□□□□□ -0.73
CLIP3-205ENST00000592017 SCAF4O95104 1147 aaKnown RBP10.49□□□□□ -0.73
CLIP3-205ENST00000592017 OR4E1P0C645 316 aa10.49□□□□□ -0.73
CLIP3-205ENST00000592017 FCGR2BP31994 310 aaPredicted RBP10.49□□□□□ -0.73
CLIP3-205ENST00000592017 MLANAQ16655 118 aa10.49□□□□□ -0.73
CLIP3-205ENST00000592017 C2orf83Q53S99 150 aa10.49□□□□□ -0.73
CLIP3-205ENST00000592017 PVRIGQ6DKI7 326 aa10.49□□□□□ -0.73
CLIP3-205ENST00000592017 LRTM2Q8N967 370 aa10.49□□□□□ -0.73
CLIP3-205ENST00000592017 COQ8AQ8NI60 647 aa10.49□□□□□ -0.73
CLIP3-205ENST00000592017 S100ZQ8WXG8 99 aa10.49□□□□□ -0.73
CLIP3-205ENST00000592017 C20orf85Q9H1P6 137 aa10.49□□□□□ -0.73
CLIP3-205ENST00000592017 C19orf73Q9NVV2 129 aa10.49□□□□□ -0.73
CLIP3-205ENST00000592017 PTTG2Q9NZH5 202 aa10.49□□□□□ -0.73
CLIP3-205ENST00000592017 MRPL36Q9P0J6 103 aaKnown RBP10.49□□□□□ -0.73
CLIP3-205ENST00000592017 TMED3Q9Y3Q3 217 aa10.49□□□□□ -0.73
CLIP3-205ENST00000592017 IGHV3-49A0A0A0MS15 119 aa10.48□□□□□ -0.73
CLIP3-205ENST00000592017 ZNF785A8K8V0 405 aa10.48□□□□□ -0.73
CLIP3-205ENST00000592017 A8MZ25 164 aa10.48□□□□□ -0.73
CLIP3-205ENST00000592017 SCGB2A1O75556 95 aa10.48□□□□□ -0.73
CLIP3-205ENST00000592017 CD7P09564 240 aa10.48□□□□□ -0.73
CLIP3-205ENST00000592017 IAPPP10997 89 aa10.48□□□□□ -0.73
CLIP3-205ENST00000592017 DHRS2Q13268 280 aa10.48□□□□□ -0.73
CLIP3-205ENST00000592017 GGNBP1Q5YKI7 109 aa10.48□□□□□ -0.73
CLIP3-205ENST00000592017 RBPMS2Q6ZRY4 209 aaKnown RBP10.48□□□□□ -0.73
CLIP3-205ENST00000592017 LYG2Q86SG7 212 aa10.48□□□□□ -0.73
CLIP3-205ENST00000592017 RCHY1Q96PM5 261 aa10.48□□□□□ -0.73
CLIP3-205ENST00000592017 NEURL2Q9BR09 285 aa10.48□□□□□ -0.73
CLIP3-205ENST00000592017 DYNC2H1Q8NCM8 4307 aaKnown RBP10.48□□□□□ -0.73
CLIP3-205ENST00000592017 C15orf62A8K5M9 175 aa10.47□□□□□ -0.73
CLIP3-205ENST00000592017 CLN5O75503 358 aa10.47□□□□□ -0.73
CLIP3-205ENST00000592017 ADAP1O75689 374 aa10.47□□□□□ -0.73
CLIP3-205ENST00000592017 C8orf88P0DMB2 117 aa10.47□□□□□ -0.73
CLIP3-205ENST00000592017 RND2P52198 227 aa10.47□□□□□ -0.73
CLIP3-205ENST00000592017 ZNF600Q6ZNG1 722 aa10.47□□□□□ -0.73
CLIP3-205ENST00000592017 LINC00299Q6ZSB3 139 aa10.47□□□□□ -0.73
CLIP3-205ENST00000592017 NOXA1Q86UR1 476 aa10.47□□□□□ -0.73
CLIP3-205ENST00000592017 OR4X1Q8NH49 305 aa10.47□□□□□ -0.73
CLIP3-205ENST00000592017 RNASEH2CQ8TDP1 164 aaKnown RBP10.47□□□□□ -0.73
CLIP3-205ENST00000592017 TMEM170AQ8WVE7 144 aa10.47□□□□□ -0.73
CLIP3-205ENST00000592017 ZNF414Q96IQ9 312 aa10.47□□□□□ -0.73
CLIP3-205ENST00000592017 WFDC10AQ9H1F0 79 aa10.47□□□□□ -0.73
CLIP3-205ENST00000592017 TUBA4BQ9H853 241 aa10.47□□□□□ -0.73
CLIP3-205ENST00000592017 PAIP2BQ9ULR5 123 aaKnown RBP10.47□□□□□ -0.73
CLIP3-205ENST00000592017 PUS1Q9Y606 427 aaKnown RBP eCLIP10.47□□□□□ -0.73
CLIP3-205ENST00000592017 TRAV6A0A075B6T7 132 aa10.46□□□□□ -0.73
CLIP3-205ENST00000592017 IGHV3OR16-13A0A075B7E8 117 aa10.46□□□□□ -0.73
CLIP3-205ENST00000592017 IGHV3-74A0A0B4J1X5 117 aa10.46□□□□□ -0.73
CLIP3-205ENST00000592017 K7EMT4 169 aa10.46□□□□□ -0.73
CLIP3-205ENST00000592017 PITX3O75364 302 aa10.46□□□□□ -0.73
CLIP3-205ENST00000592017 TMEM50AO95807 157 aa10.46□□□□□ -0.73
CLIP3-205ENST00000592017 IFNA4P05014 189 aa10.46□□□□□ -0.73
CLIP3-205ENST00000592017 SLC25A6P12236 298 aa10.46□□□□□ -0.73
CLIP3-205ENST00000592017 TOMM20LQ6UXN7 152 aa10.46□□□□□ -0.73
CLIP3-205ENST00000592017 SLC16A13Q7RTY0 426 aa10.46□□□□□ -0.73
CLIP3-205ENST00000592017 OR52B4Q8NGK2 314 aa10.46□□□□□ -0.73
CLIP3-205ENST00000592017 ACY3Q96HD9 319 aa10.46□□□□□ -0.73
CLIP3-205ENST00000592017 TM2D3Q9BRN9 247 aa10.46□□□□□ -0.73
CLIP3-205ENST00000592017 GINS3Q9BRX5 216 aa10.46□□□□□ -0.73
CLIP3-205ENST00000592017 WDR12Q9GZL7 423 aaKnown RBP10.46□□□□□ -0.73
CLIP3-205ENST00000592017 MAGT1Q9H0U3 335 aa10.46□□□□□ -0.73
CLIP3-205ENST00000592017 U3KQ87 197 aa10.46□□□□□ -0.73
CLIP3-205ENST00000592017 TRAV14DV4A0A0A6YYC5 116 aa10.45□□□□□ -0.74
CLIP3-205ENST00000592017 IGHV7-4-1A0A0J9YVY3 117 aa10.45□□□□□ -0.74
CLIP3-205ENST00000592017 MED6O75586 246 aa10.45□□□□□ -0.74
CLIP3-205ENST00000592017 IFNA21P01568 189 aa10.45□□□□□ -0.74
CLIP3-205ENST00000592017 TCRBP04435 133 aa10.45□□□□□ -0.74
CLIP3-205ENST00000592017 SLC25A4P12235 298 aa10.45□□□□□ -0.74
CLIP3-205ENST00000592017 ZNF846Q147U1 533 aa10.45□□□□□ -0.74
CLIP3-205ENST00000592017 TIGITQ495A1 244 aa10.45□□□□□ -0.74
CLIP3-205ENST00000592017 ETFRF1Q6IPR1 90 aa10.45□□□□□ -0.74
CLIP3-205ENST00000592017 PRSS54Q6PEW0 395 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms