RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 FNDC4Q9H6D8 234 aaPredicted RBP20.41■□□□□ 0.86
SMAD4-213ENST00000591914 NDUFA13Q9P0J0 144 aa20.41■□□□□ 0.86
SMAD4-213ENST00000591914 ZNF207O43670 478 aaKnown RBP20.4■□□□□ 0.86
SMAD4-213ENST00000591914 ANKRD55Q3KP44 614 aa20.4■□□□□ 0.86
SMAD4-213ENST00000591914 OR52B4Q8NGK2 314 aa20.4■□□□□ 0.86
SMAD4-213ENST00000591914 HEYLQ9NQ87 328 aaPredicted RBP20.4■□□□□ 0.86
SMAD4-213ENST00000591914 YIF1AO95070 293 aa20.39■□□□□ 0.85
SMAD4-213ENST00000591914 CCR6P51684 374 aa20.39■□□□□ 0.85
SMAD4-213ENST00000591914 BAK1Q16611 211 aa20.39■□□□□ 0.85
SMAD4-213ENST00000591914 SPAG8Q99932 426 aaPredicted RBP20.39■□□□□ 0.85
SMAD4-213ENST00000591914 CEBPZOSA8MTT3 80 aa20.38■□□□□ 0.85
SMAD4-213ENST00000591914 TSPAN4O14817 238 aa20.38■□□□□ 0.85
SMAD4-213ENST00000591914 TMEM50AO95807 157 aa20.38■□□□□ 0.85
SMAD4-213ENST00000591914 OPRK1P41145 380 aa20.38■□□□□ 0.85
SMAD4-213ENST00000591914 SMCO1Q147U7 214 aa20.38■□□□□ 0.85
SMAD4-213ENST00000591914 C2orf83Q53S99 150 aa20.38■□□□□ 0.85
SMAD4-213ENST00000591914 SRD5A3Q9H8P0 318 aa20.38■□□□□ 0.85
SMAD4-213ENST00000591914 MRPL36Q9P0J6 103 aaKnown RBP20.38■□□□□ 0.85
SMAD4-213ENST00000591914 SMPXQ9UHP9 88 aa20.38■□□□□ 0.85
SMAD4-213ENST00000591914 PIGBOS1A0A0B4J2F0 54 aa20.37■□□□□ 0.85
SMAD4-213ENST00000591914 IGHV7-4-1A0A0J9YVY3 117 aa20.37■□□□□ 0.85
SMAD4-213ENST00000591914 OR4X1Q8NH49 305 aa20.37■□□□□ 0.85
SMAD4-213ENST00000591914 SDHCQ99643 169 aaPredicted RBP20.37■□□□□ 0.85
SMAD4-213ENST00000591914 SPATA25Q9BR10 227 aa20.37■□□□□ 0.85
SMAD4-213ENST00000591914 HSPB7Q9UBY9 170 aa20.37■□□□□ 0.85
SMAD4-213ENST00000591914 RBMY1BA6NDE4 496 aaKnown RBP20.36■□□□□ 0.85
SMAD4-213ENST00000591914 RBMY1EA6NEQ0 496 aaKnown RBP20.36■□□□□ 0.85
SMAD4-213ENST00000591914 NXPH3O95157 252 aa20.36■□□□□ 0.85
SMAD4-213ENST00000591914 RBMY1DP0C7P1 496 aaKnown RBP20.36■□□□□ 0.85
SMAD4-213ENST00000591914 TNFRSF9Q07011 255 aa20.36■□□□□ 0.85
SMAD4-213ENST00000591914 MLANAQ16655 118 aa20.36■□□□□ 0.85
SMAD4-213ENST00000591914 TRIQKQ629K1 86 aa20.36■□□□□ 0.85
SMAD4-213ENST00000591914 LAMTOR1Q6IAA8 161 aa20.36■□□□□ 0.85
SMAD4-213ENST00000591914 TOMM20LQ6UXN7 152 aa20.36■□□□□ 0.85
SMAD4-213ENST00000591914 SLC24A4Q8NFF2 622 aa20.36■□□□□ 0.85
SMAD4-213ENST00000591914 DUXBA0A1W2PPF3 345 aa20.35■□□□□ 0.85
SMAD4-213ENST00000591914 CHEK1O14757 476 aa20.35■□□□□ 0.85
SMAD4-213ENST00000591914 CLN5O75503 358 aa20.35■□□□□ 0.85
SMAD4-213ENST00000591914 RBMS2Q15434 407 aaKnown RBP20.35■□□□□ 0.85
SMAD4-213ENST00000591914 ZNF600Q6ZNG1 722 aa20.35■□□□□ 0.85
SMAD4-213ENST00000591914 LRTM2Q8N967 370 aa20.35■□□□□ 0.85
SMAD4-213ENST00000591914 TMEM116Q8NCL8 245 aa20.35■□□□□ 0.85
SMAD4-213ENST00000591914 RNASEH2CQ8TDP1 164 aaKnown RBP20.35■□□□□ 0.85
SMAD4-213ENST00000591914 TMEM170AQ8WVE7 144 aa20.35■□□□□ 0.85
SMAD4-213ENST00000591914 RHPN1-AS1Q9BWJ2 59 aa20.35■□□□□ 0.85
SMAD4-213ENST00000591914 HIPK2Q9H2X6 1198 aa20.35■□□□□ 0.85
SMAD4-213ENST00000591914 TRAV14DV4A0A0A6YYC5 116 aa20.34■□□□□ 0.85
SMAD4-213ENST00000591914 A0A1B0GU03 582 aa20.34■□□□□ 0.85
SMAD4-213ENST00000591914 VAMP1P23763 118 aa20.34■□□□□ 0.85
SMAD4-213ENST00000591914 INPP1P49441 399 aa20.34■□□□□ 0.85
SMAD4-213ENST00000591914 CENPSQ8N2Z9 138 aa20.34■□□□□ 0.85
SMAD4-213ENST00000591914 GINS3Q9BRX5 216 aa20.34■□□□□ 0.85
SMAD4-213ENST00000591914 ZFAND3Q9H8U3 227 aa20.34■□□□□ 0.85
SMAD4-213ENST00000591914 RPS10-NUDT3A0A1W2PQS6 291 aa20.33■□□□□ 0.85
SMAD4-213ENST00000591914 NAP1L6A6NFF2 107 aa20.33■□□□□ 0.85
SMAD4-213ENST00000591914 PPP1R1AQ13522 171 aa20.33■□□□□ 0.85
SMAD4-213ENST00000591914 RNF2Q99496 336 aa20.33■□□□□ 0.85
SMAD4-213ENST00000591914 PUS1Q9Y606 427 aaKnown RBP eCLIP20.33■□□□□ 0.85
SMAD4-213ENST00000591914 NBEAL2Q6ZNJ1 2754 aa20.33■□□□□ 0.84
SMAD4-213ENST00000591914 DNAH7Q8WXX0 4024 aa20.32■□□□□ 0.84
SMAD4-213ENST00000591914 SFT2D2O95562 160 aa20.32■□□□□ 0.84
SMAD4-213ENST00000591914 NPY1RP25929 384 aa20.32■□□□□ 0.84
SMAD4-213ENST00000591914 IGHV3-49A0A0A0MS15 119 aa20.31■□□□□ 0.84
SMAD4-213ENST00000591914 PITX3O75364 302 aa20.31■□□□□ 0.84
SMAD4-213ENST00000591914 NOXA1Q86UR1 476 aa20.31■□□□□ 0.84
SMAD4-213ENST00000591914 DTD1Q8TEA8 209 aa20.31■□□□□ 0.84
SMAD4-213ENST00000591914 CITED4Q96RK1 184 aa20.31■□□□□ 0.84
SMAD4-213ENST00000591914 RBKSQ9H477 322 aa20.31■□□□□ 0.84
SMAD4-213ENST00000591914 SCGB2A1O75556 95 aa20.3■□□□□ 0.84
SMAD4-213ENST00000591914 NDUFB6O95139 128 aa20.3■□□□□ 0.84
SMAD4-213ENST00000591914 IGKV1-17P01599 117 aa20.3■□□□□ 0.84
SMAD4-213ENST00000591914 SLC25A4P12235 298 aa20.3■□□□□ 0.84
SMAD4-213ENST00000591914 UBE2MP61081 183 aaKnown RBP20.3■□□□□ 0.84
SMAD4-213ENST00000591914 PRSS54Q6PEW0 395 aa20.3■□□□□ 0.84
SMAD4-213ENST00000591914 OR1S1Q8NH92 325 aa20.3■□□□□ 0.84
SMAD4-213ENST00000591914 U3KQ87 197 aa20.3■□□□□ 0.84
SMAD4-213ENST00000591914 TRAV30A0A087WSZ9 112 aa20.29■□□□□ 0.84
SMAD4-213ENST00000591914 OR4C46A6NHA9 309 aa20.29■□□□□ 0.84
SMAD4-213ENST00000591914 SLC25A6P12236 298 aa20.29■□□□□ 0.84
SMAD4-213ENST00000591914 IL7P13232 177 aa20.29■□□□□ 0.84
SMAD4-213ENST00000591914 KMT2CQ8NEZ4 4911 aaKnown RBP20.29■□□□□ 0.84
SMAD4-213ENST00000591914 IFNA10P01566 189 aa20.28■□□□□ 0.84
SMAD4-213ENST00000591914 ODF3L2Q3SX64 289 aa20.28■□□□□ 0.84
SMAD4-213ENST00000591914 FAM90A2PQ658T7 463 aa20.28■□□□□ 0.84
SMAD4-213ENST00000591914 FAM110AQ9BQ89 295 aa20.28■□□□□ 0.84
SMAD4-213ENST00000591914 VSIRQ9H7M9 311 aa20.28■□□□□ 0.84
SMAD4-213ENST00000591914 TMED3Q9Y3Q3 217 aa20.28■□□□□ 0.84
SMAD4-213ENST00000591914 IGHV3OR16-13A0A075B7E8 117 aa20.27■□□□□ 0.84
SMAD4-213ENST00000591914 IGHV3-74A0A0B4J1X5 117 aa20.27■□□□□ 0.84
SMAD4-213ENST00000591914 IGLC1P0CG04 106 aa20.27■□□□□ 0.84
SMAD4-213ENST00000591914 BTCP35070 178 aa20.27■□□□□ 0.84
SMAD4-213ENST00000591914 BMI1P35226 326 aa20.27■□□□□ 0.84
SMAD4-213ENST00000591914 RND2P52198 227 aa20.27■□□□□ 0.84
SMAD4-213ENST00000591914 TIGITQ495A1 244 aa20.27■□□□□ 0.84
SMAD4-213ENST00000591914 ETFRF1Q6IPR1 90 aa20.27■□□□□ 0.84
SMAD4-213ENST00000591914 C7orf50Q9BRJ6 194 aaKnown RBP20.27■□□□□ 0.84
SMAD4-213ENST00000591914 EDA2RQ9HAV5 297 aa20.27■□□□□ 0.84
SMAD4-213ENST00000591914 LINC00854A0A1B0GVQ3 168 aa20.26■□□□□ 0.83
SMAD4-213ENST00000591914 C3orf84H3BNL1 204 aa20.26■□□□□ 0.83
SMAD4-213ENST00000591914 APOHP02749 345 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms