RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 WDR82Q6UXN9 313 aa11.11□□□□□ -0.63
SMARCA4-216ENST00000591545 TMEM133Q9H2Q1 129 aa11.11□□□□□ -0.63
SMARCA4-216ENST00000591545 OSTCQ9NRP0 149 aa11.11□□□□□ -0.63
SMARCA4-216ENST00000591545 RALGAPA1Q6GYQ0 2036 aa11.11□□□□□ -0.63
SMARCA4-216ENST00000591545 TRAV8-6A0A0B4J262 113 aa11.1□□□□□ -0.63
SMARCA4-216ENST00000591545 IGHV3-35A0A0C4DH35 117 aa11.1□□□□□ -0.63
SMARCA4-216ENST00000591545 IGHG3P01860 377 aa11.1□□□□□ -0.63
SMARCA4-216ENST00000591545 GGNQ86UU5 652 aa11.1□□□□□ -0.63
SMARCA4-216ENST00000591545 FAM89BQ8N5H3 189 aa11.1□□□□□ -0.63
SMARCA4-216ENST00000591545 IGHV1-46P01743 117 aa11.1□□□□□ -0.63
SMARCA4-216ENST00000591545 C1QTNF9P0C862 333 aa11.1□□□□□ -0.63
SMARCA4-216ENST00000591545 PAX1P15863 534 aa11.1□□□□□ -0.63
SMARCA4-216ENST00000591545 CCL3L1P16619 93 aa11.1□□□□□ -0.63
SMARCA4-216ENST00000591545 C21orf62Q9NYP8 219 aa11.1□□□□□ -0.63
SMARCA4-216ENST00000591545 H3BRM9 83 aa11.1□□□□□ -0.63
SMARCA4-216ENST00000591545 IGKV3-15P01624 115 aa11.1□□□□□ -0.63
SMARCA4-216ENST00000591545 TMEM170BQ5T4T1 132 aa11.1□□□□□ -0.63
SMARCA4-216ENST00000591545 SCGB3A1Q96QR1 104 aa11.1□□□□□ -0.63
SMARCA4-216ENST00000591545 DIDO1Q9BTC0 2240 aaKnown RBP11.1□□□□□ -0.63
SMARCA4-216ENST00000591545 TRAV40A0A0B4J280 105 aa11.1□□□□□ -0.63
SMARCA4-216ENST00000591545 SLC25A16P16260 332 aa11.1□□□□□ -0.63
SMARCA4-216ENST00000591545 LY6G6FQ5SQ64 297 aa11.1□□□□□ -0.63
SMARCA4-216ENST00000591545 FAM74A4Q5TZK3 123 aa11.1□□□□□ -0.63
SMARCA4-216ENST00000591545 IMMP2LQ96T52 175 aa11.1□□□□□ -0.63
SMARCA4-216ENST00000591545 FNDC1Q4ZHG4 1894 aaPredicted RBP11.1□□□□□ -0.63
SMARCA4-216ENST00000591545 YPEL1O60688 119 aa11.09□□□□□ -0.63
SMARCA4-216ENST00000591545 YPEL2Q96QA6 119 aa11.09□□□□□ -0.63
SMARCA4-216ENST00000591545 C2orf88Q9BSF0 95 aa11.09□□□□□ -0.63
SMARCA4-216ENST00000591545 WNT10AQ9GZT5 417 aa11.09□□□□□ -0.63
SMARCA4-216ENST00000591545 SPTAN1Q13813 2472 aaKnown RBP11.09□□□□□ -0.63
SMARCA4-216ENST00000591545 FER1L6-AS1Q8NA97 138 aa11.09□□□□□ -0.63
SMARCA4-216ENST00000591545 NBR2O15453 112 aa11.09□□□□□ -0.63
SMARCA4-216ENST00000591545 SUMO2P61956 95 aaKnown RBP11.09□□□□□ -0.63
SMARCA4-216ENST00000591545 SLC25A28Q96A46 364 aa11.09□□□□□ -0.63
SMARCA4-216ENST00000591545 C5orf30Q96GV9 206 aa11.09□□□□□ -0.63
SMARCA4-216ENST00000591545 TMEM101Q96IK0 257 aa11.09□□□□□ -0.63
SMARCA4-216ENST00000591545 A0A1W2PRE2 83 aa11.09□□□□□ -0.63
SMARCA4-216ENST00000591545 GPR183P32249 361 aa11.09□□□□□ -0.63
SMARCA4-216ENST00000591545 ATRAIDQ6UW56 229 aa11.09□□□□□ -0.63
SMARCA4-216ENST00000591545 MRPL20Q9BYC9 149 aaKnown RBP11.09□□□□□ -0.63
SMARCA4-216ENST00000591545 J3QRE1 110 aa11.08□□□□□ -0.63
SMARCA4-216ENST00000591545 MYOD1P15172 320 aa11.08□□□□□ -0.63
SMARCA4-216ENST00000591545 SRSF7Q16629 238 aaKnown RBP eCLIP11.08□□□□□ -0.63
SMARCA4-216ENST00000591545 GCSAMLQ5JQS6 135 aa11.08□□□□□ -0.63
SMARCA4-216ENST00000591545 C14orf144Q96I85 54 aa11.08□□□□□ -0.63
SMARCA4-216ENST00000591545 TMEM242Q9NWH2 141 aa11.08□□□□□ -0.63
SMARCA4-216ENST00000591545 TNFRSF18Q9Y5U5 241 aa11.08□□□□□ -0.63
SMARCA4-216ENST00000591545 TCF20Q9UGU0 1960 aaKnown RBP11.08□□□□□ -0.64
SMARCA4-216ENST00000591545 PVRIGQ6DKI7 326 aa11.08□□□□□ -0.64
SMARCA4-216ENST00000591545 MIR17HGQ75NE6 70 aa11.08□□□□□ -0.64
SMARCA4-216ENST00000591545 MRAP2Q96G30 205 aa11.08□□□□□ -0.64
SMARCA4-216ENST00000591545 A0A1B0GWB2 263 aa11.08□□□□□ -0.64
SMARCA4-216ENST00000591545 UPK2O00526 184 aa11.08□□□□□ -0.64
SMARCA4-216ENST00000591545 TSPAN13O95857 204 aa11.08□□□□□ -0.64
SMARCA4-216ENST00000591545 ZNF124Q15973 351 aa11.08□□□□□ -0.64
SMARCA4-216ENST00000591545 FOXC2Q99958 501 aa11.08□□□□□ -0.64
SMARCA4-216ENST00000591545 Q9H3A6 140 aa11.08□□□□□ -0.64
SMARCA4-216ENST00000591545 LAMTOR2Q9Y2Q5 125 aa11.08□□□□□ -0.64
SMARCA4-216ENST00000591545 SLC25A15Q9Y619 301 aa11.08□□□□□ -0.64
SMARCA4-216ENST00000591545 SPCS1Q9Y6A9 102 aa11.08□□□□□ -0.64
SMARCA4-216ENST00000591545 UBE2CO00762 179 aa11.08□□□□□ -0.64
SMARCA4-216ENST00000591545 ID3Q02535 119 aa11.08□□□□□ -0.64
SMARCA4-216ENST00000591545 NR2C2APQ86WQ0 139 aa11.08□□□□□ -0.64
SMARCA4-216ENST00000591545 LURAP1LQ8IV03 231 aa11.08□□□□□ -0.64
SMARCA4-216ENST00000591545 C10orf126Q8N4M7 172 aa11.08□□□□□ -0.64
SMARCA4-216ENST00000591545 MBD3L1Q8WWY6 194 aa11.08□□□□□ -0.64
SMARCA4-216ENST00000591545 NRN1Q9NPD7 142 aa11.08□□□□□ -0.64
SMARCA4-216ENST00000591545 ASCL2Q99929 193 aa11.07□□□□□ -0.64
SMARCA4-216ENST00000591545 TCRBV4S1A1TA0A5B7 111 aa11.07□□□□□ -0.64
SMARCA4-216ENST00000591545 C15orf61A6NNL5 157 aa11.07□□□□□ -0.64
SMARCA4-216ENST00000591545 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.07□□□□□ -0.64
SMARCA4-216ENST00000591545 WNT2P09544 360 aa11.07□□□□□ -0.64
SMARCA4-216ENST00000591545 SLC50A1Q9BRV3 221 aa11.07□□□□□ -0.64
SMARCA4-216ENST00000591545 ITLN2Q8WWU7 325 aaPredicted RBP11.07□□□□□ -0.64
SMARCA4-216ENST00000591545 CLDN16Q9Y5I7 305 aa11.07□□□□□ -0.64
SMARCA4-216ENST00000591545 SERF1AO75920 110 aa11.07□□□□□ -0.64
SMARCA4-216ENST00000591545 LYPD3O95274 346 aa11.07□□□□□ -0.64
SMARCA4-216ENST00000591545 OR10J3Q5JRS4 329 aa11.07□□□□□ -0.64
SMARCA4-216ENST00000591545 PPBPP02775 128 aa11.06□□□□□ -0.64
SMARCA4-216ENST00000591545 TNFRSF14Q92956 283 aa11.06□□□□□ -0.64
SMARCA4-216ENST00000591545 FOXA2Q9Y261 457 aaPredicted RBP11.06□□□□□ -0.64
SMARCA4-216ENST00000591545 IGHV3OR16-13A0A075B7E8 117 aa11.06□□□□□ -0.64
SMARCA4-216ENST00000591545 IGHV3-74A0A0B4J1X5 117 aa11.06□□□□□ -0.64
SMARCA4-216ENST00000591545 HIGD1CA8MV81 97 aa11.06□□□□□ -0.64
SMARCA4-216ENST00000591545 IGHV3-48P01763 117 aa11.06□□□□□ -0.64
SMARCA4-216ENST00000591545 MST1P26927 711 aa11.06□□□□□ -0.64
SMARCA4-216ENST00000591545 LINC01559Q495D7 138 aa11.06□□□□□ -0.64
SMARCA4-216ENST00000591545 C18orf15Q96N68 181 aa11.06□□□□□ -0.64
SMARCA4-216ENST00000591545 SNRNP200O75643 2136 aaKnown RBP11.06□□□□□ -0.64
SMARCA4-216ENST00000591545 MYO7BQ6PIF6 2116 aa11.06□□□□□ -0.64
SMARCA4-216ENST00000591545 A0A1B0GW64 132 aa11.06□□□□□ -0.64
SMARCA4-216ENST00000591545 GNB1LQ9BYB4 327 aa11.06□□□□□ -0.64
SMARCA4-216ENST00000591545 LINC01549A6NIU2 74 aa11.06□□□□□ -0.64
SMARCA4-216ENST00000591545 IGHV3-11P01762 117 aa11.06□□□□□ -0.64
SMARCA4-216ENST00000591545 DMRTA1Q5VZB9 504 aa11.06□□□□□ -0.64
SMARCA4-216ENST00000591545 FAM169BQ8N8A8 192 aa11.06□□□□□ -0.64
SMARCA4-216ENST00000591545 BEX4Q9NWD9 120 aaPredicted RBP11.06□□□□□ -0.64
SMARCA4-216ENST00000591545 M0R381 172 aa11.05□□□□□ -0.64
SMARCA4-216ENST00000591545 ZNF497Q6ZNH5 498 aa11.05□□□□□ -0.64
SMARCA4-216ENST00000591545 MDC1Q14676 2089 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms