RNA–Protein interactions for RNA: ENST00000590559.2

CLIP3-204, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 4

Gene CLIP3, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-204ENST00000590559 RPL5P46777 297 aaKnown RBP8.5□□□□□ -1.05
CLIP3-204ENST00000590559 AARDQ4LEZ3 155 aa8.5□□□□□ -1.05
CLIP3-204ENST00000590559 SPINK9Q5DT21 86 aa8.5□□□□□ -1.05
CLIP3-204ENST00000590559 TP53RKQ96S44 253 aa8.5□□□□□ -1.05
CLIP3-204ENST00000590559 U3KQE9 123 aa8.5□□□□□ -1.05
CLIP3-204ENST00000590559 ELOA3CA0A087WX78 387 aaPredicted RBP8.49□□□□□ -1.05
CLIP3-204ENST00000590559 IGHV4-28A0A0C4DH34 117 aa8.49□□□□□ -1.05
CLIP3-204ENST00000590559 A0A0G2JRQ6 117 aa8.49□□□□□ -1.05
CLIP3-204ENST00000590559 CORTO00230 105 aa8.49□□□□□ -1.05
CLIP3-204ENST00000590559 CLN5O75503 358 aa8.49□□□□□ -1.05
CLIP3-204ENST00000590559 IGKV1-17P01599 117 aa8.49□□□□□ -1.05
CLIP3-204ENST00000590559 MIFP14174 115 aa8.49□□□□□ -1.05
CLIP3-204ENST00000590559 ELK1P19419 428 aa8.49□□□□□ -1.05
CLIP3-204ENST00000590559 C4BPBP20851 252 aa8.49□□□□□ -1.05
CLIP3-204ENST00000590559 NPPCP23582 126 aa8.49□□□□□ -1.05
CLIP3-204ENST00000590559 LSM3P62310 102 aaKnown RBP8.49□□□□□ -1.05
CLIP3-204ENST00000590559 MLANAQ16655 118 aa8.49□□□□□ -1.05
CLIP3-204ENST00000590559 TMEM41BQ5BJD5 291 aa8.49□□□□□ -1.05
CLIP3-204ENST00000590559 MORN3Q6PF18 240 aaPredicted RBP8.49□□□□□ -1.05
CLIP3-204ENST00000590559 STHQ8IWL8 128 aa8.49□□□□□ -1.05
CLIP3-204ENST00000590559 OR4X1Q8NH49 305 aa8.49□□□□□ -1.05
CLIP3-204ENST00000590559 TMEM231Q9H6L2 316 aa8.49□□□□□ -1.05
CLIP3-204ENST00000590559 COMMD3Q9UBI1 195 aa8.49□□□□□ -1.05
CLIP3-204ENST00000590559 A0A1W2PS18 150 aa8.48□□□□□ -1.05
CLIP3-204ENST00000590559 IGLL5B9A064 214 aa8.48□□□□□ -1.05
CLIP3-204ENST00000590559 M0QYG6 137 aa8.48□□□□□ -1.05
CLIP3-204ENST00000590559 SPP1P10451 314 aa8.48□□□□□ -1.05
CLIP3-204ENST00000590559 PI3P19957 117 aa8.48□□□□□ -1.05
CLIP3-204ENST00000590559 HLA-DMBP28068 263 aa8.48□□□□□ -1.05
CLIP3-204ENST00000590559 SNCAP37840 140 aa8.48□□□□□ -1.05
CLIP3-204ENST00000590559 PPP5CP53041 499 aa8.48□□□□□ -1.05
CLIP3-204ENST00000590559 PIGPP57054 158 aa8.48□□□□□ -1.05
CLIP3-204ENST00000590559 Q6ZRM9 215 aa8.48□□□□□ -1.05
CLIP3-204ENST00000590559 SNX29P2Q8IUI4 249 aa8.48□□□□□ -1.05
CLIP3-204ENST00000590559 KLK11Q9UBX7 282 aa8.48□□□□□ -1.05
CLIP3-204ENST00000590559 RABAC1Q9UI14 185 aa8.48□□□□□ -1.05
CLIP3-204ENST00000590559 C3orf85A0A1B0GTC6 90 aa8.47□□□□□ -1.05
CLIP3-204ENST00000590559 A0A1B0GVY2 172 aa8.47□□□□□ -1.05
CLIP3-204ENST00000590559 SMIM31A0A1B0GVY4 71 aa8.47□□□□□ -1.05
CLIP3-204ENST00000590559 UCP1P25874 307 aa8.47□□□□□ -1.05
CLIP3-204ENST00000590559 ETV6P41212 452 aa8.47□□□□□ -1.05
CLIP3-204ENST00000590559 P2RY1P47900 373 aa8.47□□□□□ -1.05
CLIP3-204ENST00000590559 NCS1P62166 190 aa8.47□□□□□ -1.05
CLIP3-204ENST00000590559 RPL11P62913 178 aaKnown RBP8.47□□□□□ -1.05
CLIP3-204ENST00000590559 Q6ZTC4 211 aa8.47□□□□□ -1.05
CLIP3-204ENST00000590559 ARRDC1Q8N5I2 433 aa8.47□□□□□ -1.05
CLIP3-204ENST00000590559 SLC35G3Q8N808 338 aa8.47□□□□□ -1.05
CLIP3-204ENST00000590559 METTL26Q96S19 204 aa8.47□□□□□ -1.05
CLIP3-204ENST00000590559 IGHV4-4A0A075B6R2 117 aa8.46□□□□□ -1.06
CLIP3-204ENST00000590559 TRAV10A0A0B4J240 114 aa8.46□□□□□ -1.06
CLIP3-204ENST00000590559 KNCNA6PVL3 124 aa8.46□□□□□ -1.06
CLIP3-204ENST00000590559 HPGDSO60760 199 aa8.46□□□□□ -1.06
CLIP3-204ENST00000590559 IFNA17P01571 189 aa8.46□□□□□ -1.06
CLIP3-204ENST00000590559 CD3DP04234 171 aa8.46□□□□□ -1.06
CLIP3-204ENST00000590559 ZNF688P0C7X2 276 aa8.46□□□□□ -1.06
CLIP3-204ENST00000590559 SUB1P53999 127 aaKnown RBP eCLIP8.46□□□□□ -1.06
CLIP3-204ENST00000590559 C16orf54Q6UWD8 224 aa8.46□□□□□ -1.06
CLIP3-204ENST00000590559 STXBP6Q8NFX7 210 aa8.46□□□□□ -1.06
CLIP3-204ENST00000590559 GLMPQ8WWB7 406 aa8.46□□□□□ -1.06
CLIP3-204ENST00000590559 RNF126Q9BV68 326 aa8.46□□□□□ -1.06
CLIP3-204ENST00000590559 MTFP1Q9UDX5 166 aa8.46□□□□□ -1.06
CLIP3-204ENST00000590559 CELA1Q9UNI1 258 aa8.46□□□□□ -1.06
CLIP3-204ENST00000590559 TRAV30A0A087WSZ9 112 aa8.45□□□□□ -1.06
CLIP3-204ENST00000590559 A0A087WXM4 84 aa8.45□□□□□ -1.06
CLIP3-204ENST00000590559 CDS2O95674 445 aa8.45□□□□□ -1.06
CLIP3-204ENST00000590559 CD74P04233 296 aa8.45□□□□□ -1.06
CLIP3-204ENST00000590559 IGLC1P0CG04 106 aa8.45□□□□□ -1.06
CLIP3-204ENST00000590559 PGAM2P15259 253 aa8.45□□□□□ -1.06
CLIP3-204ENST00000590559 TBPP20226 339 aa8.45□□□□□ -1.06
CLIP3-204ENST00000590559 OPRK1P41145 380 aa8.45□□□□□ -1.06
CLIP3-204ENST00000590559 AKR1C2P52895 323 aa8.45□□□□□ -1.06
CLIP3-204ENST00000590559 VBP1P61758 197 aa8.45□□□□□ -1.06
CLIP3-204ENST00000590559 SP6Q3SY56 376 aa8.45□□□□□ -1.06
CLIP3-204ENST00000590559 TIGITQ495A1 244 aa8.45□□□□□ -1.06
CLIP3-204ENST00000590559 OR4D10Q8NGI6 311 aa8.45□□□□□ -1.06
CLIP3-204ENST00000590559 OR52E5Q8NH55 327 aa8.45□□□□□ -1.06
CLIP3-204ENST00000590559 OR52I2Q8NH67 350 aa8.45□□□□□ -1.06
CLIP3-204ENST00000590559 TMEM170AQ8WVE7 144 aa8.45□□□□□ -1.06
CLIP3-204ENST00000590559 RAB40CQ96S21 281 aa8.45□□□□□ -1.06
CLIP3-204ENST00000590559 FUNDC2Q9BWH2 189 aa8.45□□□□□ -1.06
CLIP3-204ENST00000590559 ABCA13Q86UQ4 5058 aa8.45□□□□□ -1.06
CLIP3-204ENST00000590559 B3GALNT1O75752 331 aa8.44□□□□□ -1.06
CLIP3-204ENST00000590559 ATG12O94817 140 aa8.44□□□□□ -1.06
CLIP3-204ENST00000590559 AMBPP02760 352 aa8.44□□□□□ -1.06
CLIP3-204ENST00000590559 HOXA1P49639 335 aaPredicted RBP8.44□□□□□ -1.06
CLIP3-204ENST00000590559 SPCS3P61009 180 aa8.44□□□□□ -1.06
CLIP3-204ENST00000590559 YPEL3P61236 119 aaPredicted RBP8.44□□□□□ -1.06
CLIP3-204ENST00000590559 C12orf74Q32Q52 190 aa8.44□□□□□ -1.06
CLIP3-204ENST00000590559 C2orf83Q53S99 150 aa8.44□□□□□ -1.06
CLIP3-204ENST00000590559 RNASE10Q5GAN6 216 aaKnown RBP8.44□□□□□ -1.06
CLIP3-204ENST00000590559 ACTL10Q5JWF8 245 aa8.44□□□□□ -1.06
CLIP3-204ENST00000590559 PRSS54Q6PEW0 395 aa8.44□□□□□ -1.06
CLIP3-204ENST00000590559 LINC00336Q6ZUF6 198 aa8.44□□□□□ -1.06
CLIP3-204ENST00000590559 TERB2Q8NHR7 220 aa8.44□□□□□ -1.06
CLIP3-204ENST00000590559 LHFPL5Q8TAF8 219 aa8.44□□□□□ -1.06
CLIP3-204ENST00000590559 GLYATL2Q8WU03 294 aa8.44□□□□□ -1.06
CLIP3-204ENST00000590559 TMEM230Q96A57 120 aa8.44□□□□□ -1.06
CLIP3-204ENST00000590559 ABHD1Q96SE0 405 aa8.44□□□□□ -1.06
CLIP3-204ENST00000590559 TMEM222Q9H0R3 208 aa8.44□□□□□ -1.06
CLIP3-204ENST00000590559 SEPSECSQ9HD40 501 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms