RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 SRPXP78539 464 aa9.07□□□□□ -0.96
TPM4-212ENST00000590180 TMEM128Q5BJH2 165 aa9.07□□□□□ -0.96
TPM4-212ENST00000590180 TRIQKQ629K1 86 aa9.07□□□□□ -0.96
TPM4-212ENST00000590180 SRRQ9GZT4 340 aa9.07□□□□□ -0.96
TPM4-212ENST00000590180 WFDC10AQ9H1F0 79 aa9.07□□□□□ -0.96
TPM4-212ENST00000590180 HIPK2Q9H2X6 1198 aa9.07□□□□□ -0.96
TPM4-212ENST00000590180 SRD5A3Q9H8P0 318 aa9.07□□□□□ -0.96
TPM4-212ENST00000590180 CACFD1Q9UGQ2 172 aa9.07□□□□□ -0.96
TPM4-212ENST00000590180 SHPKQ9UHJ6 478 aa9.07□□□□□ -0.96
TPM4-212ENST00000590180 SMPXQ9UHP9 88 aa9.07□□□□□ -0.96
TPM4-212ENST00000590180 TRAV14DV4A0A0A6YYC5 116 aa9.06□□□□□ -0.96
TPM4-212ENST00000590180 CCR6P51684 374 aa9.06□□□□□ -0.96
TPM4-212ENST00000590180 SMCO1Q147U7 214 aa9.06□□□□□ -0.96
TPM4-212ENST00000590180 BAK1Q16611 211 aa9.06□□□□□ -0.96
TPM4-212ENST00000590180 AARDQ4LEZ3 155 aa9.06□□□□□ -0.96
TPM4-212ENST00000590180 PVRIGQ6DKI7 326 aa9.06□□□□□ -0.96
TPM4-212ENST00000590180 TOMM20LQ6UXN7 152 aa9.06□□□□□ -0.96
TPM4-212ENST00000590180 TMEM116Q8NCL8 245 aa9.06□□□□□ -0.96
TPM4-212ENST00000590180 OR1S1Q8NH92 325 aa9.06□□□□□ -0.96
TPM4-212ENST00000590180 DEDD2Q8WXF8 326 aa9.06□□□□□ -0.96
TPM4-212ENST00000590180 SPATA25Q9BR10 227 aa9.06□□□□□ -0.96
TPM4-212ENST00000590180 TM2D3Q9BRN9 247 aa9.06□□□□□ -0.96
TPM4-212ENST00000590180 RHPN1-AS1Q9BWJ2 59 aa9.06□□□□□ -0.96
TPM4-212ENST00000590180 IGHV3OR16-13A0A075B7E8 117 aa9.05□□□□□ -0.96
TPM4-212ENST00000590180 IGHV3-74A0A0B4J1X5 117 aa9.05□□□□□ -0.96
TPM4-212ENST00000590180 PIGBOS1A0A0B4J2F0 54 aa9.05□□□□□ -0.96
TPM4-212ENST00000590180 IGHV7-4-1A0A0J9YVY3 117 aa9.05□□□□□ -0.96
TPM4-212ENST00000590180 RPS10-NUDT3A0A1W2PQS6 291 aa9.05□□□□□ -0.96
TPM4-212ENST00000590180 RBMY1BA6NDE4 496 aaKnown RBP9.05□□□□□ -0.96
TPM4-212ENST00000590180 RBMY1EA6NEQ0 496 aaKnown RBP9.05□□□□□ -0.96
TPM4-212ENST00000590180 CHEK1O14757 476 aa9.05□□□□□ -0.96
TPM4-212ENST00000590180 TSPAN4O14817 238 aa9.05□□□□□ -0.96
TPM4-212ENST00000590180 CLN5O75503 358 aa9.05□□□□□ -0.96
TPM4-212ENST00000590180 SCGB2A1O75556 95 aa9.05□□□□□ -0.96
TPM4-212ENST00000590180 IFNA10P01566 189 aa9.05□□□□□ -0.96
TPM4-212ENST00000590180 RBMY1DP0C7P1 496 aaKnown RBP9.05□□□□□ -0.96
TPM4-212ENST00000590180 C2orf83Q53S99 150 aa9.05□□□□□ -0.96
TPM4-212ENST00000590180 ZNF600Q6ZNG1 722 aa9.05□□□□□ -0.96
TPM4-212ENST00000590180 NOXA1Q86UR1 476 aa9.05□□□□□ -0.96
TPM4-212ENST00000590180 SLC24A4Q8NFF2 622 aa9.05□□□□□ -0.96
TPM4-212ENST00000590180 SPAG8Q99932 426 aaPredicted RBP9.05□□□□□ -0.96
TPM4-212ENST00000590180 GINS3Q9BRX5 216 aa9.05□□□□□ -0.96
TPM4-212ENST00000590180 FNDC4Q9H6D8 234 aaPredicted RBP9.05□□□□□ -0.96
TPM4-212ENST00000590180 MRPL36Q9P0J6 103 aaKnown RBP9.05□□□□□ -0.96
TPM4-212ENST00000590180 PUS1Q9Y606 427 aaKnown RBP eCLIP9.05□□□□□ -0.96
TPM4-212ENST00000590180 IGKV3-7A0A075B6H7 116 aa9.04□□□□□ -0.96
TPM4-212ENST00000590180 A0A1B0GU03 582 aa9.04□□□□□ -0.96
TPM4-212ENST00000590180 NAP1L6A6NFF2 107 aa9.04□□□□□ -0.96
TPM4-212ENST00000590180 CENPXA8MT69 81 aa9.04□□□□□ -0.96
TPM4-212ENST00000590180 SFT2D2O95562 160 aa9.04□□□□□ -0.96
TPM4-212ENST00000590180 BSXQ3C1V8 233 aa9.04□□□□□ -0.96
TPM4-212ENST00000590180 NMSQ5H8A3 153 aa9.04□□□□□ -0.96
TPM4-212ENST00000590180 CENPSQ8N2Z9 138 aa9.04□□□□□ -0.96
TPM4-212ENST00000590180 OR4X1Q8NH49 305 aa9.04□□□□□ -0.96
TPM4-212ENST00000590180 OR10C1Q96KK4 312 aa9.04□□□□□ -0.96
TPM4-212ENST00000590180 RNF2Q99496 336 aa9.04□□□□□ -0.96
TPM4-212ENST00000590180 RBKSQ9H477 322 aa9.04□□□□□ -0.96
TPM4-212ENST00000590180 UBQLN2Q9UHD9 624 aa9.04□□□□□ -0.96
TPM4-212ENST00000590180 NBEAL2Q6ZNJ1 2754 aa9.04□□□□□ -0.96
TPM4-212ENST00000590180 TRAV30A0A087WSZ9 112 aa9.03□□□□□ -0.96
TPM4-212ENST00000590180 OR4C46A6NHA9 309 aa9.03□□□□□ -0.96
TPM4-212ENST00000590180 NPY1RP25929 384 aa9.03□□□□□ -0.96
TPM4-212ENST00000590180 TFPI2P48307 235 aa9.03□□□□□ -0.96
TPM4-212ENST00000590180 TNFRSF9Q07011 255 aa9.03□□□□□ -0.96
TPM4-212ENST00000590180 PPP1R1AQ13522 171 aa9.03□□□□□ -0.96
TPM4-212ENST00000590180 RBMS2Q15434 407 aaKnown RBP9.03□□□□□ -0.96
TPM4-212ENST00000590180 TIGITQ495A1 244 aa9.03□□□□□ -0.96
TPM4-212ENST00000590180 ETFRF1Q6IPR1 90 aa9.03□□□□□ -0.96
TPM4-212ENST00000590180 LINC00322Q6ZN03 302 aaPredicted RBP9.03□□□□□ -0.96
TPM4-212ENST00000590180 RNASEH2CQ8TDP1 164 aaKnown RBP9.03□□□□□ -0.96
TPM4-212ENST00000590180 DTD1Q8TEA8 209 aa9.03□□□□□ -0.96
TPM4-212ENST00000590180 ZNF414Q96IQ9 312 aa9.03□□□□□ -0.96
TPM4-212ENST00000590180 HSPB7Q9UBY9 170 aa9.03□□□□□ -0.96
TPM4-212ENST00000590180 U3KQ87 197 aa9.03□□□□□ -0.96
TPM4-212ENST00000590180 LOC102724200A0A096LPH7 203 aaPredicted RBP9.02□□□□□ -0.97
TPM4-212ENST00000590180 IGHV3-66A0A0C4DH42 116 aa9.02□□□□□ -0.97
TPM4-212ENST00000590180 DUXBA0A1W2PPF3 345 aa9.02□□□□□ -0.97
TPM4-212ENST00000590180 IFNA4P05014 189 aa9.02□□□□□ -0.97
TPM4-212ENST00000590180 HOXB5P09067 269 aa9.02□□□□□ -0.97
TPM4-212ENST00000590180 SLC25A4P12235 298 aa9.02□□□□□ -0.97
TPM4-212ENST00000590180 NPPCP23582 126 aa9.02□□□□□ -0.97
TPM4-212ENST00000590180 BMI1P35226 326 aa9.02□□□□□ -0.97
TPM4-212ENST00000590180 RND2P52198 227 aa9.02□□□□□ -0.97
TPM4-212ENST00000590180 RPL11P62913 178 aaKnown RBP9.02□□□□□ -0.97
TPM4-212ENST00000590180 PAFAH1B2P68402 229 aa9.02□□□□□ -0.97
TPM4-212ENST00000590180 PRSS54Q6PEW0 395 aa9.02□□□□□ -0.97
TPM4-212ENST00000590180 WFDC3Q8IUB2 231 aa9.02□□□□□ -0.97
TPM4-212ENST00000590180 GBGT1Q8N5D6 347 aa9.02□□□□□ -0.97
TPM4-212ENST00000590180 SDHCQ99643 169 aaPredicted RBP9.02□□□□□ -0.97
TPM4-212ENST00000590180 PAIP2BQ9ULR5 123 aaKnown RBP9.02□□□□□ -0.97
TPM4-212ENST00000590180 C3orf84H3BNL1 204 aa9.01□□□□□ -0.97
TPM4-212ENST00000590180 NDUFB6O95139 128 aa9.01□□□□□ -0.97
TPM4-212ENST00000590180 APOHP02749 345 aaPredicted RBP9.01□□□□□ -0.97
TPM4-212ENST00000590180 CMC4P56277 68 aaPredicted RBP9.01□□□□□ -0.97
TPM4-212ENST00000590180 TCF24Q7RTU0 167 aa9.01□□□□□ -0.97
TPM4-212ENST00000590180 LRTM2Q8N967 370 aa9.01□□□□□ -0.97
TPM4-212ENST00000590180 Q8WTZ3 238 aa9.01□□□□□ -0.97
TPM4-212ENST00000590180 TMEM170AQ8WVE7 144 aa9.01□□□□□ -0.97
TPM4-212ENST00000590180 ST8SIA2Q92186 375 aa9.01□□□□□ -0.97
TPM4-212ENST00000590180 NPIPB3Q92617 1050 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms