RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 RPL23P62829 140 aaKnown RBP11.96□□□□□ -0.5
RETREG3-208ENST00000589797 MTORP42345 2549 aa11.96□□□□□ -0.5
RETREG3-208ENST00000589797 IGLV1-44P01699 117 aa11.95□□□□□ -0.5
RETREG3-208ENST00000589797 TCTAP57738 103 aa11.95□□□□□ -0.5
RETREG3-208ENST00000589797 RELBQ01201 579 aa11.95□□□□□ -0.5
RETREG3-208ENST00000589797 EFNB3Q15768 340 aa11.95□□□□□ -0.5
RETREG3-208ENST00000589797 SPSB3Q6PJ21 355 aa11.95□□□□□ -0.5
RETREG3-208ENST00000589797 TCF23Q7RTU1 214 aa11.95□□□□□ -0.5
RETREG3-208ENST00000589797 DSPP15924 2871 aaKnown RBP11.95□□□□□ -0.5
RETREG3-208ENST00000589797 SH2D7A6NKC9 451 aaPredicted RBP11.95□□□□□ -0.5
RETREG3-208ENST00000589797 CXCL1P09341 107 aa11.95□□□□□ -0.5
RETREG3-208ENST00000589797 LMO1P25800 156 aa11.95□□□□□ -0.5
RETREG3-208ENST00000589797 IGFL3Q6UXB1 125 aa11.95□□□□□ -0.5
RETREG3-208ENST00000589797 GGTLC1Q9BX51 225 aa11.95□□□□□ -0.5
RETREG3-208ENST00000589797 TNRC6AQ8NDV7 1962 aaKnown RBP11.95□□□□□ -0.5
RETREG3-208ENST00000589797 COLCA2A8K830 154 aa11.95□□□□□ -0.5
RETREG3-208ENST00000589797 ORM1P02763 201 aa11.95□□□□□ -0.5
RETREG3-208ENST00000589797 HTN1P15515 57 aa11.95□□□□□ -0.5
RETREG3-208ENST00000589797 CYP2G1PQ6ZSU1 146 aa11.95□□□□□ -0.5
RETREG3-208ENST00000589797 OR4A5Q8NH83 315 aa11.95□□□□□ -0.5
RETREG3-208ENST00000589797 PLA2G2EQ9NZK7 142 aa11.95□□□□□ -0.5
RETREG3-208ENST00000589797 NDUFS7O75251 213 aa11.94□□□□□ -0.5
RETREG3-208ENST00000589797 CA1P00915 261 aaPredicted RBP11.94□□□□□ -0.5
RETREG3-208ENST00000589797 RPL29P47914 159 aaKnown RBP11.94□□□□□ -0.5
RETREG3-208ENST00000589797 RNASE7Q9H1E1 156 aaKnown RBP11.94□□□□□ -0.5
RETREG3-208ENST00000589797 TMEM250H0YL14 139 aa11.94□□□□□ -0.5
RETREG3-208ENST00000589797 GNLYP22749 145 aa11.94□□□□□ -0.5
RETREG3-208ENST00000589797 TFPI2P48307 235 aa11.94□□□□□ -0.5
RETREG3-208ENST00000589797 GNG5P63218 68 aa11.94□□□□□ -0.5
RETREG3-208ENST00000589797 CCDC144NLQ6NUI1 221 aa11.94□□□□□ -0.5
RETREG3-208ENST00000589797 CLEC2AQ6UVW9 174 aa11.94□□□□□ -0.5
RETREG3-208ENST00000589797 GOLT1AQ6ZVE7 132 aa11.94□□□□□ -0.5
RETREG3-208ENST00000589797 WNT10AQ9GZT5 417 aa11.94□□□□□ -0.5
RETREG3-208ENST00000589797 AMY1AP04745 511 aa11.94□□□□□ -0.5
RETREG3-208ENST00000589797 CEACAM8P31997 349 aaPredicted RBP11.94□□□□□ -0.5
RETREG3-208ENST00000589797 PPP1R27Q86WC6 154 aa11.94□□□□□ -0.5
RETREG3-208ENST00000589797 ARL2-SNX15V9GYD0 113 aa11.94□□□□□ -0.5
RETREG3-208ENST00000589797 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.93□□□□□ -0.5
RETREG3-208ENST00000589797 PF4V1P10720 104 aa11.93□□□□□ -0.5
RETREG3-208ENST00000589797 SELENOTP62341 195 aa11.93□□□□□ -0.5
RETREG3-208ENST00000589797 HAPLN4Q86UW8 402 aa11.93□□□□□ -0.5
RETREG3-208ENST00000589797 LINC00518Q8N0U6 118 aa11.93□□□□□ -0.5
RETREG3-208ENST00000589797 SRSF12Q8WXF0 261 aaKnown RBP11.93□□□□□ -0.5
RETREG3-208ENST00000589797 NDFIP1Q9BT67 221 aa11.93□□□□□ -0.5
RETREG3-208ENST00000589797 IGHV1-8P0DP01 117 aa11.93□□□□□ -0.5
RETREG3-208ENST00000589797 S100A4P26447 101 aaKnown RBP11.93□□□□□ -0.5
RETREG3-208ENST00000589797 GFI1BQ5VTD9 330 aa11.93□□□□□ -0.5
RETREG3-208ENST00000589797 SFRP2Q96HF1 295 aa11.93□□□□□ -0.5
RETREG3-208ENST00000589797 NBEAP1P0C6P0 100 aa11.93□□□□□ -0.5
RETREG3-208ENST00000589797 TMEM144Q7Z5S9 345 aa11.93□□□□□ -0.5
RETREG3-208ENST00000589797 NOL4LQ96MY1 436 aaPredicted RBP11.92□□□□□ -0.5
RETREG3-208ENST00000589797 MGST2Q99735 147 aa11.92□□□□□ -0.5
RETREG3-208ENST00000589797 IFT22Q9H7X7 185 aa11.92□□□□□ -0.5
RETREG3-208ENST00000589797 FAM106CPP0CH98 169 aa11.92□□□□□ -0.5
RETREG3-208ENST00000589797 TPPP2P59282 170 aa11.92□□□□□ -0.5
RETREG3-208ENST00000589797 SSX8Q7RTT4 187 aa11.92□□□□□ -0.5
RETREG3-208ENST00000589797 SMIM15Q7Z3B0 74 aa11.92□□□□□ -0.5
RETREG3-208ENST00000589797 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.92□□□□□ -0.5
RETREG3-208ENST00000589797 OCC1Q8TAD7 63 aa11.92□□□□□ -0.5
RETREG3-208ENST00000589797 PITPNC1Q9UKF7 332 aa11.92□□□□□ -0.5
RETREG3-208ENST00000589797 MSRB2Q9Y3D2 182 aa11.92□□□□□ -0.5
RETREG3-208ENST00000589797 CNTFRP26992 372 aa11.92□□□□□ -0.5
RETREG3-208ENST00000589797 ASPHD1Q5U4P2 390 aa11.92□□□□□ -0.5
RETREG3-208ENST00000589797 IGHV2-26A0A0B4J1V2 119 aa11.92□□□□□ -0.5
RETREG3-208ENST00000589797 RBFOX2O43251 390 aaKnown RBP eCLIP11.92□□□□□ -0.5
RETREG3-208ENST00000589797 AREGP15514 252 aa11.92□□□□□ -0.5
RETREG3-208ENST00000589797 UTF1Q5T230 341 aa11.92□□□□□ -0.5
RETREG3-208ENST00000589797 VN1R17PQ8TDU5 208 aa11.92□□□□□ -0.5
RETREG3-208ENST00000589797 CHRDL1Q9BU40 450 aa11.92□□□□□ -0.5
RETREG3-208ENST00000589797 PAM16Q9Y3D7 125 aa11.92□□□□□ -0.5
RETREG3-208ENST00000589797 KIAA1549Q9HCM3 1950 aa11.91□□□□□ -0.5
RETREG3-208ENST00000589797 FOXA3P55318 350 aaPredicted RBP11.91□□□□□ -0.5
RETREG3-208ENST00000589797 C17orf58Q2M2W7 97 aa11.91□□□□□ -0.5
RETREG3-208ENST00000589797 Q8NFD4 153 aa11.91□□□□□ -0.5
RETREG3-208ENST00000589797 RNF2Q99496 336 aa11.91□□□□□ -0.5
RETREG3-208ENST00000589797 C15orf65H3BRN8 121 aa11.91□□□□□ -0.5
RETREG3-208ENST00000589797 PRCDQ00LT1 54 aa11.91□□□□□ -0.5
RETREG3-208ENST00000589797 ELOBQ15370 118 aa11.91□□□□□ -0.5
RETREG3-208ENST00000589797 KRTAP27-1Q3LI81 207 aa11.91□□□□□ -0.5
RETREG3-208ENST00000589797 C1QL4Q86Z23 238 aa11.91□□□□□ -0.5
RETREG3-208ENST00000589797 PGLYRP4Q96LB8 373 aa11.91□□□□□ -0.5
RETREG3-208ENST00000589797 ASCL2Q99929 193 aa11.91□□□□□ -0.5
RETREG3-208ENST00000589797 BOD1L1Q8NFC6 3051 aa11.91□□□□□ -0.5
RETREG3-208ENST00000589797 SFTPCP11686 197 aa11.91□□□□□ -0.5
RETREG3-208ENST00000589797 NBL1P41271 181 aa11.91□□□□□ -0.5
RETREG3-208ENST00000589797 CD69Q07108 199 aa11.91□□□□□ -0.5
RETREG3-208ENST00000589797 SRRM4A7MD48 611 aaKnown RBP11.9□□□□□ -0.5
RETREG3-208ENST00000589797 IGFL2Q6UWQ7 119 aa11.9□□□□□ -0.5
RETREG3-208ENST00000589797 MBD3L1Q8WWY6 194 aa11.9□□□□□ -0.5
RETREG3-208ENST00000589797 LINC00479Q96M42 142 aa11.9□□□□□ -0.5
RETREG3-208ENST00000589797 S100A7P31151 101 aa11.9□□□□□ -0.5
RETREG3-208ENST00000589797 TMEM219Q86XT9 240 aa11.9□□□□□ -0.5
RETREG3-208ENST00000589797 BPIFA4PQ86YQ2 179 aa11.9□□□□□ -0.5
RETREG3-208ENST00000589797 STXBP6Q8NFX7 210 aa11.9□□□□□ -0.5
RETREG3-208ENST00000589797 PRSS3P2Q8NHM4 247 aa11.9□□□□□ -0.5
RETREG3-208ENST00000589797 NEU1Q99519 415 aa11.9□□□□□ -0.5
RETREG3-208ENST00000589797 RABAC1Q9UI14 185 aa11.9□□□□□ -0.5
RETREG3-208ENST00000589797 NPIPB11E5RHQ5 1161 aa11.89□□□□□ -0.51
RETREG3-208ENST00000589797 C5orf17Q8NAS9 161 aa11.89□□□□□ -0.51
RETREG3-208ENST00000589797 TPSG1Q9NRR2 321 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms