RNA–Protein interactions for RNA: ENST00000589697.1

RAB8A-205, Transcript of RAB8A, member RAS oncogene family, human

TSL 1 (best)

Gene RAB8A, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB8A-205	ENST00000589697	TMEM249	Q2WGJ8	235 aa		10.14	□□□□□ -0.79
RAB8A-205	ENST00000589697	KLF17	Q5JT82	389 aa	Predicted RBP	10.14	□□□□□ -0.79
RAB8A-205	ENST00000589697	ZNF506	Q5JVG8	444 aa		10.14	□□□□□ -0.79
RAB8A-205	ENST00000589697	CYP2G1P	Q6ZSU1	146 aa		10.14	□□□□□ -0.79
RAB8A-205	ENST00000589697	NAV2	Q8IVL1	2488 aa		10.14	□□□□□ -0.79
RAB8A-205	ENST00000589697	THAP8	Q8NA92	274 aa		10.14	□□□□□ -0.79
RAB8A-205	ENST00000589697	SLC25A33	Q9BSK2	321 aa		10.14	□□□□□ -0.79
RAB8A-205	ENST00000589697	ZFP92	A6NM28	416 aa		10.13	□□□□□ -0.79
RAB8A-205	ENST00000589697		C9JQL5	133 aa		10.13	□□□□□ -0.79
RAB8A-205	ENST00000589697	HMGB3	O15347	200 aa	Known RBP	10.13	□□□□□ -0.79
RAB8A-205	ENST00000589697	MT-CO2	P00403	227 aa		10.13	□□□□□ -0.79
RAB8A-205	ENST00000589697	AVP	P01185	164 aa		10.13	□□□□□ -0.79
RAB8A-205	ENST00000589697	IGHV3-48	P01763	117 aa		10.13	□□□□□ -0.79
RAB8A-205	ENST00000589697	LINC00869	P0C866	280 aa		10.13	□□□□□ -0.79
RAB8A-205	ENST00000589697	BCL2	P10415	239 aa		10.13	□□□□□ -0.79
RAB8A-205	ENST00000589697	BPIFB3	P59826	476 aa		10.13	□□□□□ -0.79
RAB8A-205	ENST00000589697	RHOB	P62745	196 aa		10.13	□□□□□ -0.79
RAB8A-205	ENST00000589697	KHDC3L	Q587J8	217 aa		10.13	□□□□□ -0.79
RAB8A-205	ENST00000589697	KRTAP1-3	Q8IUG1	177 aa		10.13	□□□□□ -0.79
RAB8A-205	ENST00000589697	TMEM116	Q8NCL8	245 aa		10.13	□□□□□ -0.79
RAB8A-205	ENST00000589697	RBM14	Q96PK6	669 aa	Known RBP	10.13	□□□□□ -0.79
RAB8A-205	ENST00000589697	SSX3	Q99909	188 aa		10.13	□□□□□ -0.79
RAB8A-205	ENST00000589697	RARRES2	Q99969	163 aa		10.13	□□□□□ -0.79
RAB8A-205	ENST00000589697	SLC35B3	Q9H1N7	401 aa		10.13	□□□□□ -0.79
RAB8A-205	ENST00000589697	CARHSP1	Q9Y2V2	147 aa	Known RBP	10.13	□□□□□ -0.79
RAB8A-205	ENST00000589697	DMRT1	Q9Y5R6	373 aa		10.13	□□□□□ -0.79
RAB8A-205	ENST00000589697	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	10.13	□□□□□ -0.79	1e-6	■■■□□ 18.5
RAB8A-205	ENST00000589697	ABCA12	Q86UK0	2595 aa		10.12	□□□□□ -0.79
RAB8A-205	ENST00000589697	LOC102723971	A0A1B0GUV8	181 aa		10.12	□□□□□ -0.79
RAB8A-205	ENST00000589697	TCRBV4S1A1T	A0A5B7	111 aa		10.12	□□□□□ -0.79
RAB8A-205	ENST00000589697	EIF3G	O75821	320 aa	Known RBP eCLIP	10.12	□□□□□ -0.79
RAB8A-205	ENST00000589697	HSPB1	P04792	205 aa	Known RBP	10.12	□□□□□ -0.79
RAB8A-205	ENST00000589697	SELENOT	P62341	195 aa		10.12	□□□□□ -0.79
RAB8A-205	ENST00000589697	DEFA5	Q01523	94 aa		10.12	□□□□□ -0.79
RAB8A-205	ENST00000589697	PMS2P11	Q13670	270 aa		10.12	□□□□□ -0.79
RAB8A-205	ENST00000589697	ICAM4	Q14773	271 aa		10.12	□□□□□ -0.79
RAB8A-205	ENST00000589697	C10orf91	Q5T1B1	145 aa		10.12	□□□□□ -0.79
RAB8A-205	ENST00000589697	RBMS3	Q6XE24	437 aa	Known RBP	10.12	□□□□□ -0.79
RAB8A-205	ENST00000589697	TMEM219	Q86XT9	240 aa		10.12	□□□□□ -0.79
RAB8A-205	ENST00000589697	SVBP	Q8N300	66 aa		10.12	□□□□□ -0.79
RAB8A-205	ENST00000589697	C5orf56	Q8N8D9	126 aa		10.12	□□□□□ -0.79
RAB8A-205	ENST00000589697	C19orf24	Q9BVV8	132 aa		10.12	□□□□□ -0.79
RAB8A-205	ENST00000589697	MANBAL	Q9NQG1	85 aa		10.12	□□□□□ -0.79
RAB8A-205	ENST00000589697		I3L2K1	104 aa		10.11	□□□□□ -0.79
RAB8A-205	ENST00000589697	TAGLN2	P37802	199 aa	Known RBP	10.11	□□□□□ -0.79
RAB8A-205	ENST00000589697	ASPHD1	Q5U4P2	390 aa		10.11	□□□□□ -0.79
RAB8A-205	ENST00000589697	TTC9C	Q8N5M4	171 aa		10.11	□□□□□ -0.79
RAB8A-205	ENST00000589697	PIFO	Q8TCI5	191 aa		10.11	□□□□□ -0.79
RAB8A-205	ENST00000589697	TRGV9	Q99603	122 aa		10.11	□□□□□ -0.79
RAB8A-205	ENST00000589697	HSPB9	Q9BQS6	159 aa		10.11	□□□□□ -0.79
RAB8A-205	ENST00000589697	MRPL36	Q9P0J6	103 aa	Known RBP	10.11	□□□□□ -0.79
RAB8A-205	ENST00000589697	TMA7	Q9Y2S6	64 aa	Known RBP	10.11	□□□□□ -0.79
RAB8A-205	ENST00000589697	CSMD2	Q7Z408	3487 aa		10.11	□□□□□ -0.79
RAB8A-205	ENST00000589697	VPS13C	Q709C8	3753 aa		10.11	□□□□□ -0.79
RAB8A-205	ENST00000589697	IGKV1D-37	A0A075B6S9	117 aa		10.11	□□□□□ -0.79
RAB8A-205	ENST00000589697	IGHV3-21	A0A0B4J1V1	117 aa		10.11	□□□□□ -0.79
RAB8A-205	ENST00000589697	LOC105371267	A0A1B0GV96	52 aa		10.11	□□□□□ -0.79
RAB8A-205	ENST00000589697	SGMS2	Q8NHU3	365 aa		10.11	□□□□□ -0.79
RAB8A-205	ENST00000589697	RXFP4	Q8TDU9	374 aa		10.11	□□□□□ -0.79
RAB8A-205	ENST00000589697	TNFRSF19	Q9NS68	423 aa		10.11	□□□□□ -0.79
RAB8A-205	ENST00000589697	VAX2	Q9UIW0	290 aa		10.11	□□□□□ -0.79
RAB8A-205	ENST00000589697	PITPNC1	Q9UKF7	332 aa		10.11	□□□□□ -0.79
RAB8A-205	ENST00000589697		H3BUX3	64 aa		10.1	□□□□□ -0.79
RAB8A-205	ENST00000589697	CXorf1	O96002	111 aa		10.1	□□□□□ -0.79
RAB8A-205	ENST00000589697	GATA2	P23769	480 aa	Predicted RBP	10.1	□□□□□ -0.79
RAB8A-205	ENST00000589697	PSMB3	P49720	205 aa		10.1	□□□□□ -0.79
RAB8A-205	ENST00000589697	SLC35E3	Q7Z769	313 aa		10.1	□□□□□ -0.79
RAB8A-205	ENST00000589697	OR4X1	Q8NH49	305 aa		10.1	□□□□□ -0.79
RAB8A-205	ENST00000589697	RNF2	Q99496	336 aa		10.1	□□□□□ -0.79
RAB8A-205	ENST00000589697	CR1	P17927	2039 aa		10.1	□□□□□ -0.79
RAB8A-205	ENST00000589697	APC	P25054	2843 aa		10.1	□□□□□ -0.79
RAB8A-205	ENST00000589697	HELZ2	Q9BYK8	2649 aa	Known RBP	10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697	IGLV11-55	A0A075B6I3	123 aa		10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697		K7EIM0	57 aa		10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697		M0QZK8	103 aa		10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697	ATP6V0E1	O15342	81 aa		10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697	OR5G3	P0C626	314 aa		10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697	STAG3L2	P0CL84	134 aa		10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697	STAG3L3	P0CL85	134 aa		10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697	ARL14EPL	P0DKL9	152 aa		10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697	EGR2	P11161	476 aa	Predicted RBP	10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697	ZNF90	Q03938	601 aa		10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697	FAM78B	Q5VT40	261 aa		10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697	CYB5R2	Q6BCY4	276 aa		10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697	OR1L4	Q8NGR5	311 aa		10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697	NANP	Q8TBE9	248 aa		10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697	TMEM68	Q96MH6	324 aa		10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697	PFDN5	Q99471	154 aa		10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697	TMUB1	Q9BVT8	246 aa		10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697	TMPRSS5	Q9H3S3	457 aa		10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697	SEPSECS	Q9HD40	501 aa	Known RBP	10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697	THYN1	Q9P016	225 aa		10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697	FUT9	Q9Y231	359 aa		10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697		A6NDX4	124 aa		10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697	COX7A2P2	O60397	106 aa		10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697	SNAPIN	O95295	136 aa		10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697	SRP19	P09132	144 aa	Known RBP	10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697	GUCA2B	Q16661	112 aa		10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697	ECSCR	Q19T08	205 aa		10.09	□□□□□ -0.79
RAB8A-205	ENST00000589697	SOHLH1	Q5JUK2	328 aa		10.09	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms