RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 TM4SF20Q53R12 229 aa12.43□□□□□ -0.42
DNMT1-221ENST00000589538 UXS1Q8NBZ7 420 aa12.43□□□□□ -0.42
DNMT1-221ENST00000589538 SLC24A4Q8NFF2 622 aa12.43□□□□□ -0.42
DNMT1-221ENST00000589538 COQ8AQ8NI60 647 aa12.43□□□□□ -0.42
DNMT1-221ENST00000589538 U3KQ87 197 aa12.43□□□□□ -0.42
DNMT1-221ENST00000589538 TRAV25A0A0B4J276 109 aa12.42□□□□□ -0.42
DNMT1-221ENST00000589538 C9orf170A2RU37 121 aa12.42□□□□□ -0.42
DNMT1-221ENST00000589538 FAM90A26D6RGX4 464 aa12.42□□□□□ -0.42
DNMT1-221ENST00000589538 MED6O75586 246 aa12.42□□□□□ -0.42
DNMT1-221ENST00000589538 NPY1RP25929 384 aa12.42□□□□□ -0.42
DNMT1-221ENST00000589538 ETFRF1Q6IPR1 90 aa12.42□□□□□ -0.42
DNMT1-221ENST00000589538 DTD1Q8TEA8 209 aa12.42□□□□□ -0.42
DNMT1-221ENST00000589538 WDR12Q9GZL7 423 aaKnown RBP12.42□□□□□ -0.42
DNMT1-221ENST00000589538 A8MZ25 164 aa12.41□□□□□ -0.42
DNMT1-221ENST00000589538 PLA2G10O15496 165 aa12.41□□□□□ -0.42
DNMT1-221ENST00000589538 IFNA10P01566 189 aa12.41□□□□□ -0.42
DNMT1-221ENST00000589538 IGHV3-48P01763 117 aa12.41□□□□□ -0.42
DNMT1-221ENST00000589538 OR4E1P0C645 316 aa12.41□□□□□ -0.42
DNMT1-221ENST00000589538 SLC25A4P12235 298 aa12.41□□□□□ -0.42
DNMT1-221ENST00000589538 LYG2Q86SG7 212 aa12.41□□□□□ -0.42
DNMT1-221ENST00000589538 OR4X1Q8NH49 305 aa12.41□□□□□ -0.42
DNMT1-221ENST00000589538 CACNG8Q8WXS5 425 aa12.41□□□□□ -0.42
DNMT1-221ENST00000589538 C20orf24Q9BUV8 137 aa12.41□□□□□ -0.42
DNMT1-221ENST00000589538 RBKSQ9H477 322 aa12.41□□□□□ -0.42
DNMT1-221ENST00000589538 FLVCR2Q9UPI3 526 aa12.41□□□□□ -0.42
DNMT1-221ENST00000589538 TRAV30A0A087WSZ9 112 aa12.4□□□□□ -0.42
DNMT1-221ENST00000589538 IZUMO1RA6ND01 250 aa12.4□□□□□ -0.42
DNMT1-221ENST00000589538 PITX3O75364 302 aa12.4□□□□□ -0.42
DNMT1-221ENST00000589538 CLN5O75503 358 aa12.4□□□□□ -0.42
DNMT1-221ENST00000589538 YIF1AO95070 293 aa12.4□□□□□ -0.42
DNMT1-221ENST00000589538 NXPH3O95157 252 aa12.4□□□□□ -0.42
DNMT1-221ENST00000589538 IFNA21P01568 189 aa12.4□□□□□ -0.42
DNMT1-221ENST00000589538 DHRS2Q13268 280 aa12.4□□□□□ -0.42
DNMT1-221ENST00000589538 C4orf46Q504U0 113 aa12.4□□□□□ -0.42
DNMT1-221ENST00000589538 ZNF600Q6ZNG1 722 aa12.4□□□□□ -0.42
DNMT1-221ENST00000589538 Q8N1Y9 231 aa12.4□□□□□ -0.42
DNMT1-221ENST00000589538 OR10C1Q96KK4 312 aa12.4□□□□□ -0.42
DNMT1-221ENST00000589538 GINS3Q9BRX5 216 aa12.4□□□□□ -0.42
DNMT1-221ENST00000589538 MLXQ9UH92 298 aa12.4□□□□□ -0.42
DNMT1-221ENST00000589538 ZNF785A8K8V0 405 aa12.39□□□□□ -0.43
DNMT1-221ENST00000589538 TMEM50AO95807 157 aa12.39□□□□□ -0.43
DNMT1-221ENST00000589538 HOXB5P09067 269 aa12.39□□□□□ -0.43
DNMT1-221ENST00000589538 BMI1P35226 326 aa12.39□□□□□ -0.43
DNMT1-221ENST00000589538 ZNF846Q147U1 533 aa12.39□□□□□ -0.43
DNMT1-221ENST00000589538 GUCA2BQ16661 112 aa12.39□□□□□ -0.43
DNMT1-221ENST00000589538 GGNBP1Q5YKI7 109 aa12.39□□□□□ -0.43
DNMT1-221ENST00000589538 LAMTOR1Q6IAA8 161 aa12.39□□□□□ -0.43
DNMT1-221ENST00000589538 MZT2BQ6NZ67 158 aa12.39□□□□□ -0.43
DNMT1-221ENST00000589538 BTNL8Q6UX41 500 aa12.39□□□□□ -0.43
DNMT1-221ENST00000589538 RBPMS2Q6ZRY4 209 aaKnown RBP12.39□□□□□ -0.43
DNMT1-221ENST00000589538 CIB3Q96Q77 187 aaPredicted RBP12.39□□□□□ -0.43
DNMT1-221ENST00000589538 C20orf85Q9H1P6 137 aa12.39□□□□□ -0.43
DNMT1-221ENST00000589538 FNDC4Q9H6D8 234 aaPredicted RBP12.39□□□□□ -0.43
DNMT1-221ENST00000589538 TCRBP04435 133 aa12.38□□□□□ -0.43
DNMT1-221ENST00000589538 IGHV4-30-4P0DP06 118 aa12.38□□□□□ -0.43
DNMT1-221ENST00000589538 ANXA7P20073 488 aaKnown RBP12.38□□□□□ -0.43
DNMT1-221ENST00000589538 EDN2P20800 178 aa12.38□□□□□ -0.43
DNMT1-221ENST00000589538 RPP30P78346 268 aaKnown RBP12.38□□□□□ -0.43
DNMT1-221ENST00000589538 SLC16A13Q7RTY0 426 aa12.38□□□□□ -0.43
DNMT1-221ENST00000589538 TMEM61Q8N0U2 210 aa12.38□□□□□ -0.43
DNMT1-221ENST00000589538 TRAV14DV4A0A0A6YYC5 116 aa12.37□□□□□ -0.43
DNMT1-221ENST00000589538 FRMD6-AS1P0C7T7 363 aa12.37□□□□□ -0.43
DNMT1-221ENST00000589538 CD81P60033 236 aa12.37□□□□□ -0.43
DNMT1-221ENST00000589538 TMEM116Q8NCL8 245 aa12.37□□□□□ -0.43
DNMT1-221ENST00000589538 WDR89Q96FK6 387 aaPredicted RBP12.37□□□□□ -0.43
DNMT1-221ENST00000589538 SPAG8Q99932 426 aaPredicted RBP12.37□□□□□ -0.43
DNMT1-221ENST00000589538 NEURL2Q9BR09 285 aa12.37□□□□□ -0.43
DNMT1-221ENST00000589538 TUBA4BQ9H853 241 aa12.37□□□□□ -0.43
DNMT1-221ENST00000589538 SMPXQ9UHP9 88 aa12.37□□□□□ -0.43
DNMT1-221ENST00000589538 FAM240BA0A1B0GVZ2 78 aa12.36□□□□□ -0.43
DNMT1-221ENST00000589538 SYNGR2O43760 224 aa12.36□□□□□ -0.43
DNMT1-221ENST00000589538 IFNA4P05014 189 aa12.36□□□□□ -0.43
DNMT1-221ENST00000589538 CD5P06127 495 aa12.36□□□□□ -0.43
DNMT1-221ENST00000589538 RAB11AP62491 216 aa12.36□□□□□ -0.43
DNMT1-221ENST00000589538 ASAH1Q13510 395 aa12.36□□□□□ -0.43
DNMT1-221ENST00000589538 OR1S2Q8NGQ3 325 aa12.36□□□□□ -0.43
DNMT1-221ENST00000589538 C19orf73Q9NVV2 129 aa12.36□□□□□ -0.43
DNMT1-221ENST00000589538 PUS1Q9Y606 427 aaKnown RBP eCLIP12.36□□□□□ -0.43
DNMT1-221ENST00000589538 IGHV3OR16-8A0A075B7F1 116 aa12.35□□□□□ -0.43
DNMT1-221ENST00000589538 IGHV7-4-1A0A0J9YVY3 117 aa12.35□□□□□ -0.43
DNMT1-221ENST00000589538 TSPAN4O14817 238 aa12.35□□□□□ -0.43
DNMT1-221ENST00000589538 ZNF207O43670 478 aaKnown RBP12.35□□□□□ -0.43
DNMT1-221ENST00000589538 GPX4P36969 197 aaPredicted RBP12.35□□□□□ -0.43
DNMT1-221ENST00000589538 RND2P52198 227 aa12.35□□□□□ -0.43
DNMT1-221ENST00000589538 MLANAQ16655 118 aa12.35□□□□□ -0.43
DNMT1-221ENST00000589538 PRSS54Q6PEW0 395 aa12.35□□□□□ -0.43
DNMT1-221ENST00000589538 TOMM20LQ6UXN7 152 aa12.35□□□□□ -0.43
DNMT1-221ENST00000589538 OR52B4Q8NGK2 314 aa12.35□□□□□ -0.43
DNMT1-221ENST00000589538 MITD1Q8WV92 249 aa12.35□□□□□ -0.43
DNMT1-221ENST00000589538 TMEM170AQ8WVE7 144 aa12.35□□□□□ -0.43
DNMT1-221ENST00000589538 COL7A1Q02388 2944 aa12.34□□□□□ -0.43
DNMT1-221ENST00000589538 ADAP1O75689 374 aa12.34□□□□□ -0.43
DNMT1-221ENST00000589538 UPK1BO75841 260 aa12.34□□□□□ -0.43
DNMT1-221ENST00000589538 SCAF4O95104 1147 aaKnown RBP12.34□□□□□ -0.43
DNMT1-221ENST00000589538 OR10J1P30954 320 aa12.34□□□□□ -0.43
DNMT1-221ENST00000589538 YPEL3P61236 119 aaPredicted RBP12.34□□□□□ -0.43
DNMT1-221ENST00000589538 NARS2Q96I59 477 aaKnown RBP12.34□□□□□ -0.43
DNMT1-221ENST00000589538 ZNF414Q96IQ9 312 aa12.34□□□□□ -0.43
DNMT1-221ENST00000589538 RHPN1-AS1Q9BWJ2 59 aa12.34□□□□□ -0.43
DNMT1-221ENST00000589538 TMEM231Q9H6L2 316 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms