RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 KIAA0586Q9BVV6 1533 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 EEF1E1-BLOC1S5C9J1V9 151 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 TRAPPC2LH3BP13 241 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 M0R036 132 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 KCNK1O00180 336 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 DEFA4P12838 97 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 KCNE1P15382 129 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 MSNP26038 577 aaKnown RBP0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 S100A7P31151 101 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 CTAG1AP78358 180 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 RPL18Q07020 188 aaKnown RBP0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 GUK1Q16774 197 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 CCDC122Q5T0U0 273 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 GLT8D1Q68CQ7 371 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 FAM173BQ6P4H8 233 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 TBC1D19Q8N5T2 526 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 OR8J2Q8NGG1 315 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 OR2T4Q8NH00 348 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 ACOT12Q8WYK0 555 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 CISHQ9NSE2 258 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 PAQR5Q9NXK6 330 aaPredicted RBP0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 NAT8Q9UHE5 227 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 FUT9Q9Y231 359 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 LSM5Q9Y4Y9 91 aaKnown RBP0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 TIMM22Q9Y584 194 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 SNURFQ9Y675 71 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 CICQ96RK0 1608 aaPredicted RBP0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 CHD8Q9HCK8 2581 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 FLT4P35916 1363 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 RICTORQ6R327 1708 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 TNS1Q9HBL0 1735 aaKnown RBP0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 TCOF1Q13428 1488 aaKnown RBP0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 RAPGEF2Q9Y4G8 1499 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 ANKRD17O75179 2603 aaKnown RBP0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 FLNBO75369 2602 aaKnown RBP0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 MAST1Q9Y2H9 1570 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 VPS13CQ709C8 3753 aa0.66□□□□□ -2.3
HMGN1P30-201ENST00000589286 TET3O43151 1660 aa0.65□□□□□ -2.3
HMGN1P30-201ENST00000589286 SHPRHQ149N8 1683 aa0.65□□□□□ -2.3
HMGN1P30-201ENST00000589286 NIPBLQ6KC79 2804 aaeCLIP0.65□□□□□ -2.3
HMGN1P30-201ENST00000589286 TACC2O95359 2948 aa0.65□□□□□ -2.3
HMGN1P30-201ENST00000589286 SCAPERQ9BY12 1400 aa0.65□□□□□ -2.3
HMGN1P30-201ENST00000589286 ZNF469Q96JG9 3925 aaPredicted RBP0.65□□□□□ -2.3
HMGN1P30-201ENST00000589286 PDE4DIPQ5VU43 2346 aa0.65□□□□□ -2.3
HMGN1P30-201ENST00000589286 MAGI3Q5TCQ9 1506 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 CASP8AP2Q9UKL3 1982 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 WDR97A6NE52 1622 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 RGPD1P0DJD0 1748 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 TGIF2-C20orf24A0A0A6YYL0 155 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 A0A0J9YY10 115 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 TRBV10-2A0A0K0K1G8 114 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 A0A1B0GX78 115 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 MEIS3P1A6NDR6 274 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 HCRTO43612 131 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 NOS1APO75052 506 aaPredicted RBP0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 IGHV3-7P01780 117 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 PPBPP02775 128 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 PRM2P04554 102 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 IFNA16P05015 189 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 MSMBP08118 114 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 SERPINA6P08185 405 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 TRGC1P0CF51 173 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 SULT1A3P0DMM9 295 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 SULT1A4P0DMN0 295 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 HLA-DMBP28068 263 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 HAAOP46952 286 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 FXYD2P54710 66 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 CCL20P78556 96 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 IFITM2Q01629 132 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 IBA57Q5T440 356 aaKnown RBP0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 FAM27BQ5VT28 67 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 DEFB123Q8N688 67 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 ZNF676Q8N7Q3 588 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 IMP4Q96G21 291 aaKnown RBP0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 ERMAPQ96PL5 475 aaPredicted RBP0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 OR52E6Q96RD3 313 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 EFCAB1Q9HAE3 211 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 IL36BQ9NZH7 164 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 MAP1AP78559 2803 aaPredicted RBP0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 RYR1P21817 5038 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 SPTBN4Q9H254 2564 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 NBEAL2Q6ZNJ1 2754 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 DIP2AQ14689 1571 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 CASZ1Q86V15 1759 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 CSMD2Q7Z408 3487 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 CENPEQ02224 2701 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 CSMD1Q96PZ7 3565 aa0.65□□□□□ -2.31
HMGN1P30-201ENST00000589286 ALPK2Q86TB3 2170 aa0.64□□□□□ -2.31
HMGN1P30-201ENST00000589286 FHAD1B1AJZ9 1412 aa0.64□□□□□ -2.31
HMGN1P30-201ENST00000589286 EFCAB5A4FU69 1503 aa0.64□□□□□ -2.31
HMGN1P30-201ENST00000589286 EFCAB6Q5THR3 1501 aa0.64□□□□□ -2.31
HMGN1P30-201ENST00000589286 LMTK2Q8IWU2 1503 aa0.64□□□□□ -2.31
HMGN1P30-201ENST00000589286 FAM135AQ9P2D6 1515 aa0.64□□□□□ -2.31
HMGN1P30-201ENST00000589286 USP9XQ93008 2570 aaPredicted RBP0.64□□□□□ -2.31
HMGN1P30-201ENST00000589286 ABCA6Q8N139 1617 aa0.64□□□□□ -2.31
HMGN1P30-201ENST00000589286 ABCA5Q8WWZ7 1642 aa0.64□□□□□ -2.31
HMGN1P30-201ENST00000589286 PCLOQ9Y6V0 5065 aa0.64□□□□□ -2.31
HMGN1P30-201ENST00000589286 PRRC2CQ9Y520 2896 aaKnown RBP0.64□□□□□ -2.31
HMGN1P30-201ENST00000589286 TRBV20OR9-2A0A075B6H5 130 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms