RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 HSD17B11Q8NBQ5 300 aa11.33□□□□□ -0.6
NPC1-207ENST00000588867 SCARB1Q8WTV0 552 aa11.33□□□□□ -0.6
NPC1-207ENST00000588867 TRBV9A0A0B4J1U6 114 aa11.32□□□□□ -0.6
NPC1-207ENST00000588867 CFHR3Q02985 330 aa11.32□□□□□ -0.6
NPC1-207ENST00000588867 VWC2Q2TAL6 325 aa11.32□□□□□ -0.6
NPC1-207ENST00000588867 C15orf32Q32M92 178 aa11.32□□□□□ -0.6
NPC1-207ENST00000588867 TREML4Q6UXN2 200 aa11.32□□□□□ -0.6
NPC1-207ENST00000588867 LCNL1Q6ZST4 164 aa11.32□□□□□ -0.6
NPC1-207ENST00000588867 NECAP1Q8NC96 275 aa11.32□□□□□ -0.6
NPC1-207ENST00000588867 NPIPB3Q92617 1050 aa11.32□□□□□ -0.6
NPC1-207ENST00000588867 KLK15Q9H2R5 256 aa11.32□□□□□ -0.6
NPC1-207ENST00000588867 MRPL36Q9P0J6 103 aaKnown RBP11.32□□□□□ -0.6
NPC1-207ENST00000588867 IGLV1-40P01703 118 aa11.31□□□□□ -0.6
NPC1-207ENST00000588867 IGHV3-23P01764 117 aa11.31□□□□□ -0.6
NPC1-207ENST00000588867 TPT1P13693 172 aaKnown RBP11.31□□□□□ -0.6
NPC1-207ENST00000588867 FGF7P21781 194 aa11.31□□□□□ -0.6
NPC1-207ENST00000588867 RND2P52198 227 aa11.31□□□□□ -0.6
NPC1-207ENST00000588867 UBAC2Q8NBM4 344 aa11.31□□□□□ -0.6
NPC1-207ENST00000588867 TEP1Q99973 2627 aaKnown RBP11.31□□□□□ -0.6
NPC1-207ENST00000588867 MFSD2BA6NFX1 497 aa11.31□□□□□ -0.6
NPC1-207ENST00000588867 H3BUA1 57 aa11.31□□□□□ -0.6
NPC1-207ENST00000588867 IGHG4P01861 327 aa11.31□□□□□ -0.6
NPC1-207ENST00000588867 EIF5AP63241 154 aaKnown RBP11.31□□□□□ -0.6
NPC1-207ENST00000588867 ATP5G2Q06055 141 aa11.31□□□□□ -0.6
NPC1-207ENST00000588867 TEX38Q6PEX7 206 aa11.31□□□□□ -0.6
NPC1-207ENST00000588867 BTNL8Q6UX41 500 aa11.31□□□□□ -0.6
NPC1-207ENST00000588867 BAP18Q8IXM2 172 aa11.31□□□□□ -0.6
NPC1-207ENST00000588867 ST8SIA2Q92186 375 aa11.31□□□□□ -0.6
NPC1-207ENST00000588867 WDR61Q9GZS3 305 aaKnown RBP11.31□□□□□ -0.6
NPC1-207ENST00000588867 NF1P21359 2839 aa11.3□□□□□ -0.6
NPC1-207ENST00000588867 FNDC10F2Z333 226 aa11.3□□□□□ -0.6
NPC1-207ENST00000588867 RAB9AP51151 201 aa11.3□□□□□ -0.6
NPC1-207ENST00000588867 RUNX1Q01196 453 aa11.3□□□□□ -0.6
NPC1-207ENST00000588867 TEPPQ6URK8 271 aa11.3□□□□□ -0.6
NPC1-207ENST00000588867 TMEM144Q7Z5S9 345 aa11.3□□□□□ -0.6
NPC1-207ENST00000588867 SLA2Q9H6Q3 261 aa11.3□□□□□ -0.6
NPC1-207ENST00000588867 C21orf62Q9NYP8 219 aa11.3□□□□□ -0.6
NPC1-207ENST00000588867 WDR83OSQ9Y284 106 aa11.3□□□□□ -0.6
NPC1-207ENST00000588867 KLK9Q2XQG4 91 aa11.3□□□□□ -0.6
NPC1-207ENST00000588867 KLHDC1Q8N7A1 406 aa11.3□□□□□ -0.6
NPC1-207ENST00000588867 LINC01006Q8NI28 216 aa11.3□□□□□ -0.6
NPC1-207ENST00000588867 STOML3Q8TAV4 291 aa11.3□□□□□ -0.6
NPC1-207ENST00000588867 CXorf58Q96LI9 332 aa11.3□□□□□ -0.6
NPC1-207ENST00000588867 RSG1Q9BU20 258 aa11.3□□□□□ -0.6
NPC1-207ENST00000588867 C16orf95Q9H693 158 aa11.3□□□□□ -0.6
NPC1-207ENST00000588867 KLK9Q9UKQ9 250 aa11.3□□□□□ -0.6
NPC1-207ENST00000588867 RFNGQ9Y644 331 aa11.3□□□□□ -0.6
NPC1-207ENST00000588867 FAM223BA6NKX1 122 aa11.29□□□□□ -0.6
NPC1-207ENST00000588867 ZFP92A6NM28 416 aa11.29□□□□□ -0.6
NPC1-207ENST00000588867 HAX1O00165 279 aa11.29□□□□□ -0.6
NPC1-207ENST00000588867 PSMB8P28062 276 aa11.29□□□□□ -0.6
NPC1-207ENST00000588867 MFAP4P55083 255 aa11.29□□□□□ -0.6
NPC1-207ENST00000588867 Q56UQ5 140 aa11.29□□□□□ -0.6
NPC1-207ENST00000588867 FAM223AQ8IWN6 122 aa11.29□□□□□ -0.6
NPC1-207ENST00000588867 TMEM116Q8NCL8 245 aa11.29□□□□□ -0.6
NPC1-207ENST00000588867 VN1R17PQ8TDU5 208 aa11.29□□□□□ -0.6
NPC1-207ENST00000588867 GINS3Q9BRX5 216 aa11.29□□□□□ -0.6
NPC1-207ENST00000588867 IGKV1OR2-108A0A075B7D4 117 aa11.28□□□□□ -0.6
NPC1-207ENST00000588867 BRI3O95415 125 aa11.28□□□□□ -0.6
NPC1-207ENST00000588867 CFDP00746 253 aaPredicted RBP11.28□□□□□ -0.6
NPC1-207ENST00000588867 MDKP21741 143 aaPredicted RBP11.28□□□□□ -0.6
NPC1-207ENST00000588867 ATP6V0CP27449 155 aa11.28□□□□□ -0.6
NPC1-207ENST00000588867 RAB31Q13636 194 aa11.28□□□□□ -0.6
NPC1-207ENST00000588867 ZNF709Q8N972 641 aa11.28□□□□□ -0.6
NPC1-207ENST00000588867 OR5AU1Q8NGC0 362 aa11.28□□□□□ -0.6
NPC1-207ENST00000588867 OR4X1Q8NH49 305 aa11.28□□□□□ -0.6
NPC1-207ENST00000588867 EEF1AKMT3Q96AZ1 226 aa11.28□□□□□ -0.6
NPC1-207ENST00000588867 NPCDR1Q9BY65 106 aa11.28□□□□□ -0.6
NPC1-207ENST00000588867 SH3BGRL3Q9H299 93 aa11.28□□□□□ -0.6
NPC1-207ENST00000588867 SLC25A32Q9H2D1 315 aa11.28□□□□□ -0.6
NPC1-207ENST00000588867 GNG7O60262 68 aa11.28□□□□□ -0.6
NPC1-207ENST00000588867 NDUFA7O95182 113 aa11.28□□□□□ -0.6
NPC1-207ENST00000588867 IGHV3-11P01762 117 aa11.28□□□□□ -0.6
NPC1-207ENST00000588867 NPBWR1P48145 328 aa11.28□□□□□ -0.6
NPC1-207ENST00000588867 CAMLGP49069 296 aa11.28□□□□□ -0.6
NPC1-207ENST00000588867 OR4F5Q8NH21 305 aa11.28□□□□□ -0.6
NPC1-207ENST00000588867 USMG5Q96IX5 58 aa11.28□□□□□ -0.6
NPC1-207ENST00000588867 MGST2Q99735 147 aa11.28□□□□□ -0.6
NPC1-207ENST00000588867 PARD6GQ9BYG4 376 aaPredicted RBP11.28□□□□□ -0.6
NPC1-207ENST00000588867 ARV1Q9H2C2 271 aa11.28□□□□□ -0.6
NPC1-207ENST00000588867 LSM4Q9Y4Z0 139 aaKnown RBP11.28□□□□□ -0.6
NPC1-207ENST00000588867 A0A0G2JLM5 398 aa11.27□□□□□ -0.61
NPC1-207ENST00000588867 TMEM89A2RUT3 159 aa11.27□□□□□ -0.61
NPC1-207ENST00000588867 OR2T8A6NH00 312 aa11.27□□□□□ -0.61
NPC1-207ENST00000588867 AGPAT2O15120 278 aa11.27□□□□□ -0.61
NPC1-207ENST00000588867 MPDU1O75352 247 aa11.27□□□□□ -0.61
NPC1-207ENST00000588867 CLN5O75503 358 aa11.27□□□□□ -0.61
NPC1-207ENST00000588867 RPLP1P05386 114 aaKnown RBP11.27□□□□□ -0.61
NPC1-207ENST00000588867 ELANEP08246 267 aa11.27□□□□□ -0.61
NPC1-207ENST00000588867 OR10J1P30954 320 aa11.27□□□□□ -0.61
NPC1-207ENST00000588867 FOXE3Q13461 319 aa11.27□□□□□ -0.61
NPC1-207ENST00000588867 TEX261Q6UWH6 196 aa11.27□□□□□ -0.61
NPC1-207ENST00000588867 ALKAL2Q6UX46 152 aa11.27□□□□□ -0.61
NPC1-207ENST00000588867 TMED6Q8WW62 240 aa11.27□□□□□ -0.61
NPC1-207ENST00000588867 GNPNAT1Q96EK6 184 aaPredicted RBP11.27□□□□□ -0.61
NPC1-207ENST00000588867 NIPBLQ6KC79 2804 aaeCLIP11.27□□□□□ -0.61
NPC1-207ENST00000588867 C17orf112F2Z3M2 114 aa11.26□□□□□ -0.61
NPC1-207ENST00000588867 CLEC3BP05452 202 aa11.26□□□□□ -0.61
NPC1-207ENST00000588867 CLEC19AQ6UXS0 136 aa11.26□□□□□ -0.61
NPC1-207ENST00000588867 OR2G3Q8NGZ4 309 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms