RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 OR2T6Q8NHC8 308 aa17.49■□□□□ 0.39
ATG4D-209ENST00000588857 ACY3Q96HD9 319 aa17.49■□□□□ 0.39
ATG4D-209ENST00000588857 RSG1Q9BU20 258 aa17.49■□□□□ 0.39
ATG4D-209ENST00000588857 PRSS22Q9GZN4 317 aa17.49■□□□□ 0.39
ATG4D-209ENST00000588857 IGLV11-55A0A075B6I3 123 aa17.48■□□□□ 0.39
ATG4D-209ENST00000588857 C17orf112F2Z3M2 114 aa17.48■□□□□ 0.39
ATG4D-209ENST00000588857 IGHV3-48P01763 117 aa17.48■□□□□ 0.39
ATG4D-209ENST00000588857 HIST1H1BP16401 226 aaKnown RBP17.48■□□□□ 0.39
ATG4D-209ENST00000588857 RAB31Q13636 194 aa17.48■□□□□ 0.39
ATG4D-209ENST00000588857 Q6ZS46 218 aa17.48■□□□□ 0.39
ATG4D-209ENST00000588857 PSMG3Q9BT73 122 aaPredicted RBP17.48■□□□□ 0.39
ATG4D-209ENST00000588857 NPCDR1Q9BY65 106 aa17.48■□□□□ 0.39
ATG4D-209ENST00000588857 ZNF355PQ9NSJ1 428 aa17.48■□□□□ 0.39
ATG4D-209ENST00000588857 LINC00527Q9UJ94 153 aa17.48■□□□□ 0.39
ATG4D-209ENST00000588857 TIMM9Q9Y5J7 89 aa17.48■□□□□ 0.39
ATG4D-209ENST00000588857 DNAJC9-AS1A6NH13 148 aa17.47■□□□□ 0.39
ATG4D-209ENST00000588857 TRIM77I1YAP6 450 aa17.47■□□□□ 0.39
ATG4D-209ENST00000588857 RNF141Q8WVD5 230 aa17.47■□□□□ 0.39
ATG4D-209ENST00000588857 FANCD2OSQ96PS1 177 aa17.47■□□□□ 0.39
ATG4D-209ENST00000588857 RFNGQ9Y644 331 aa17.47■□□□□ 0.39
ATG4D-209ENST00000588857 IGHV3-21A0A0B4J1V1 117 aa17.46■□□□□ 0.39
ATG4D-209ENST00000588857 I3L2K1 104 aa17.46■□□□□ 0.39
ATG4D-209ENST00000588857 TMEM182Q6ZP80 229 aaPredicted RBP17.46■□□□□ 0.39
ATG4D-209ENST00000588857 LSM4Q9Y4Z0 139 aaKnown RBP17.46■□□□□ 0.39
ATG4D-209ENST00000588857 FAM157CP0CG43 387 aa17.45■□□□□ 0.38
ATG4D-209ENST00000588857 CAMLGP49069 296 aa17.45■□□□□ 0.38
ATG4D-209ENST00000588857 RND2P52198 227 aa17.45■□□□□ 0.38
ATG4D-209ENST00000588857 C19orf54Q5BKX5 351 aa17.45■□□□□ 0.38
ATG4D-209ENST00000588857 ZNF418Q8TF45 676 aaPredicted RBP17.45■□□□□ 0.38
ATG4D-209ENST00000588857 NPIPB3Q92617 1050 aa17.45■□□□□ 0.38
ATG4D-209ENST00000588857 NOL4LQ96MY1 436 aaPredicted RBP17.45■□□□□ 0.38
ATG4D-209ENST00000588857 MGST2Q99735 147 aa17.45■□□□□ 0.38
ATG4D-209ENST00000588857 SERF2P84101 59 aa17.45■□□□□ 0.38
ATG4D-209ENST00000588857 CENPVQ7Z7K6 275 aaPredicted RBP17.45■□□□□ 0.38
ATG4D-209ENST00000588857 LRRC20Q8TCA0 184 aa17.45■□□□□ 0.38
ATG4D-209ENST00000588857 ZNF580Q9UK33 172 aa17.45■□□□□ 0.38
ATG4D-209ENST00000588857 UMAD1C9J7I0 102 aa17.44■□□□□ 0.38
ATG4D-209ENST00000588857 K7EIM0 57 aa17.44■□□□□ 0.38
ATG4D-209ENST00000588857 AGPAT2O15120 278 aa17.44■□□□□ 0.38
ATG4D-209ENST00000588857 OR2J3O76001 311 aa17.44■□□□□ 0.38
ATG4D-209ENST00000588857 SULT1A2P50226 295 aa17.44■□□□□ 0.38
ATG4D-209ENST00000588857 AKR1C8PQ5T2L2 129 aa17.44■□□□□ 0.38
ATG4D-209ENST00000588857 ACSM6Q6P461 480 aa17.44■□□□□ 0.38
ATG4D-209ENST00000588857 TMEM116Q8NCL8 245 aa17.44■□□□□ 0.38
ATG4D-209ENST00000588857 KCNIP2Q9NS61 270 aa17.44■□□□□ 0.38
ATG4D-209ENST00000588857 FBXL7Q9UJT9 491 aa17.44■□□□□ 0.38
ATG4D-209ENST00000588857 RAB5CP51148 216 aa17.43■□□□□ 0.38
ATG4D-209ENST00000588857 GGTLC1Q9BX51 225 aa17.43■□□□□ 0.38
ATG4D-209ENST00000588857 MRPL36Q9P0J6 103 aaKnown RBP17.43■□□□□ 0.38
ATG4D-209ENST00000588857 ZFP92A6NM28 416 aa17.42■□□□□ 0.38
ATG4D-209ENST00000588857 ZNF705EA8MWA4 302 aaPredicted RBP17.42■□□□□ 0.38
ATG4D-209ENST00000588857 CLDN34H7C241 214 aa17.42■□□□□ 0.38
ATG4D-209ENST00000588857 KLK9Q2XQG4 91 aa17.42■□□□□ 0.38
ATG4D-209ENST00000588857 NECAP1Q8NC96 275 aa17.42■□□□□ 0.38
ATG4D-209ENST00000588857 PCNPQ8WW12 178 aaKnown RBP17.42■□□□□ 0.38
ATG4D-209ENST00000588857 ESM1Q9NQ30 184 aa17.42■□□□□ 0.38
ATG4D-209ENST00000588857 PLA2G2EQ9NZK7 142 aa17.42■□□□□ 0.38
ATG4D-209ENST00000588857 KLK9Q9UKQ9 250 aa17.42■□□□□ 0.38
ATG4D-209ENST00000588857 IGKV1OR2-108A0A075B7D4 117 aa17.41■□□□□ 0.38
ATG4D-209ENST00000588857 SOX15O60248 233 aa17.41■□□□□ 0.38
ATG4D-209ENST00000588857 NDUFB8O95169 186 aa17.41■□□□□ 0.38
ATG4D-209ENST00000588857 ELLP55199 621 aaPredicted RBP17.41■□□□□ 0.38
ATG4D-209ENST00000588857 RHOGP84095 191 aa17.41■□□□□ 0.38
ATG4D-209ENST00000588857 TMEM95Q3KNT9 176 aa17.41■□□□□ 0.38
ATG4D-209ENST00000588857 CLLU1Q5K131 121 aa17.41■□□□□ 0.38
ATG4D-209ENST00000588857 THAP8Q8NA92 274 aa17.41■□□□□ 0.38
ATG4D-209ENST00000588857 OR4X1Q8NH49 305 aa17.41■□□□□ 0.38
ATG4D-209ENST00000588857 MS4A10Q96PG2 267 aa17.41■□□□□ 0.38
ATG4D-209ENST00000588857 ZNF702PQ9H963 129 aa17.41■□□□□ 0.38
ATG4D-209ENST00000588857 TRBV9A0A0B4J1U6 114 aa17.4■□□□□ 0.38
ATG4D-209ENST00000588857 PPIFP30405 207 aaKnown RBP17.4■□□□□ 0.38
ATG4D-209ENST00000588857 OR10J1P30954 320 aa17.4■□□□□ 0.38
ATG4D-209ENST00000588857 FFAR4Q5NUL3 377 aa17.4■□□□□ 0.38
ATG4D-209ENST00000588857 CUBNO60494 3623 aa17.4■□□□□ 0.38
ATG4D-209ENST00000588857 FAM181BA6NEQ2 426 aa17.4■□□□□ 0.38
ATG4D-209ENST00000588857 H3BUA1 57 aa17.4■□□□□ 0.38
ATG4D-209ENST00000588857 NMBP08949 121 aa17.4■□□□□ 0.38
ATG4D-209ENST00000588857 MFAP4P55083 255 aa17.4■□□□□ 0.38
ATG4D-209ENST00000588857 VN1R17PQ8TDU5 208 aa17.4■□□□□ 0.38
ATG4D-209ENST00000588857 SAT2Q96F10 170 aaPredicted RBP17.4■□□□□ 0.38
ATG4D-209ENST00000588857 PXMP4Q9Y6I8 212 aa17.4■□□□□ 0.38
ATG4D-209ENST00000588857 TSPAN15O95858 294 aa17.39■□□□□ 0.37
ATG4D-209ENST00000588857 MBP02144 154 aa17.39■□□□□ 0.37
ATG4D-209ENST00000588857 RPL29P47914 159 aaKnown RBP17.39■□□□□ 0.37
ATG4D-209ENST00000588857 NPBWR1P48145 328 aa17.39■□□□□ 0.37
ATG4D-209ENST00000588857 DEFA5Q01523 94 aa17.39■□□□□ 0.37
ATG4D-209ENST00000588857 C15orf32Q32M92 178 aa17.39■□□□□ 0.37
ATG4D-209ENST00000588857 MIC13Q5XKP0 118 aa17.39■□□□□ 0.37
ATG4D-209ENST00000588857 CXorf58Q96LI9 332 aa17.39■□□□□ 0.37
ATG4D-209ENST00000588857 JMJD8Q96S16 334 aa17.39■□□□□ 0.37
ATG4D-209ENST00000588857 C21orf62Q9NYP8 219 aa17.39■□□□□ 0.37
ATG4D-209ENST00000588857 SLC45A2Q9UMX9 530 aa17.39■□□□□ 0.37
ATG4D-209ENST00000588857 S4R3C0 116 aa17.39■□□□□ 0.37
ATG4D-209ENST00000588857 MFSD2BA6NFX1 497 aa17.38■□□□□ 0.37
ATG4D-209ENST00000588857 CLN5O75503 358 aa17.38■□□□□ 0.37
ATG4D-209ENST00000588857 BRI3O95415 125 aa17.38■□□□□ 0.37
ATG4D-209ENST00000588857 TRGV3P03979 118 aa17.38■□□□□ 0.37
ATG4D-209ENST00000588857 HILS1P60008 231 aa17.38■□□□□ 0.37
ATG4D-209ENST00000588857 TMEM41BQ5BJD5 291 aa17.38■□□□□ 0.37
ATG4D-209ENST00000588857 DPPA3Q6W0C5 159 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms