RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 MLANAQ16655 118 aa24.35■■□□□ 1.49
CAPNS1-206ENST00000588815 RSG1Q9BU20 258 aa24.35■■□□□ 1.49
CAPNS1-206ENST00000588815 G3V318 75 aa24.34■■□□□ 1.49
CAPNS1-206ENST00000588815 H3BUA1 57 aa24.34■■□□□ 1.49
CAPNS1-206ENST00000588815 DNAJC9-AS1A6NH13 148 aa24.33■■□□□ 1.49
CAPNS1-206ENST00000588815 K7EIM0 57 aa24.33■■□□□ 1.49
CAPNS1-206ENST00000588815 RPL15P61313 204 aaKnown RBP24.33■■□□□ 1.49
CAPNS1-206ENST00000588815 OR2T6Q8NHC8 308 aa24.33■■□□□ 1.49
CAPNS1-206ENST00000588815 TRBV9A0A0B4J1U6 114 aa24.32■■□□□ 1.48
CAPNS1-206ENST00000588815 CAMLGP49069 296 aa24.32■■□□□ 1.48
CAPNS1-206ENST00000588815 FAM74A1Q5RGS3 127 aa24.32■■□□□ 1.48
CAPNS1-206ENST00000588815 THAP8Q8NA92 274 aa24.32■■□□□ 1.48
CAPNS1-206ENST00000588815 ACY3Q96HD9 319 aa24.32■■□□□ 1.48
CAPNS1-206ENST00000588815 MGST2Q99735 147 aa24.32■■□□□ 1.48
CAPNS1-206ENST00000588815 FAM157CP0CG43 387 aa24.32■■□□□ 1.48
CAPNS1-206ENST00000588815 CLLU1Q5K131 121 aa24.32■■□□□ 1.48
CAPNS1-206ENST00000588815 Q6ZS46 218 aa24.32■■□□□ 1.48
CAPNS1-206ENST00000588815 OR4X1Q8NH49 305 aa24.32■■□□□ 1.48
CAPNS1-206ENST00000588815 AGPAT2O15120 278 aa24.31■■□□□ 1.48
CAPNS1-206ENST00000588815 PRH1P02810 166 aa24.31■■□□□ 1.48
CAPNS1-206ENST00000588815 PPIFP30405 207 aaKnown RBP24.31■■□□□ 1.48
CAPNS1-206ENST00000588815 RND2P52198 227 aa24.31■■□□□ 1.48
CAPNS1-206ENST00000588815 Q8N2B8 174 aa24.31■■□□□ 1.48
CAPNS1-206ENST00000588815 VN1R17PQ8TDU5 208 aa24.31■■□□□ 1.48
CAPNS1-206ENST00000588815 NPIPB3Q92617 1050 aa24.31■■□□□ 1.48
CAPNS1-206ENST00000588815 SAT2Q96F10 170 aaPredicted RBP24.31■■□□□ 1.48
CAPNS1-206ENST00000588815 GGTLC1Q9BX51 225 aa24.31■■□□□ 1.48
CAPNS1-206ENST00000588815 MBP02144 154 aa24.3■■□□□ 1.48
CAPNS1-206ENST00000588815 AKR1C8PQ5T2L2 129 aa24.3■■□□□ 1.48
CAPNS1-206ENST00000588815 DPPA3Q6W0C5 159 aa24.3■■□□□ 1.48
CAPNS1-206ENST00000588815 TMEM182Q6ZP80 229 aaPredicted RBP24.3■■□□□ 1.48
CAPNS1-206ENST00000588815 NECAP1Q8NC96 275 aa24.3■■□□□ 1.48
CAPNS1-206ENST00000588815 JMJD8Q96S16 334 aa24.3■■□□□ 1.48
CAPNS1-206ENST00000588815 RPL29P47914 159 aaKnown RBP24.29■■□□□ 1.48
CAPNS1-206ENST00000588815 ZNF702PQ9H963 129 aa24.29■■□□□ 1.48
CAPNS1-206ENST00000588815 ZNF355PQ9NSJ1 428 aa24.29■■□□□ 1.48
CAPNS1-206ENST00000588815 IGKV1OR2-108A0A075B7D4 117 aa24.28■■□□□ 1.48
CAPNS1-206ENST00000588815 ACSM6Q6P461 480 aa24.28■■□□□ 1.48
CAPNS1-206ENST00000588815 CXorf58Q96LI9 332 aa24.28■■□□□ 1.48
CAPNS1-206ENST00000588815 PLA2G2EQ9NZK7 142 aa24.28■■□□□ 1.48
CAPNS1-206ENST00000588815 FBXL7Q9UJT9 491 aa24.28■■□□□ 1.48
CAPNS1-206ENST00000588815 OR2J3O76001 311 aa24.27■■□□□ 1.48
CAPNS1-206ENST00000588815 NMBP08949 121 aa24.27■■□□□ 1.48
CAPNS1-206ENST00000588815 FCGR2BP31994 310 aaPredicted RBP24.27■■□□□ 1.48
CAPNS1-206ENST00000588815 NPBWR1P48145 328 aa24.27■■□□□ 1.48
CAPNS1-206ENST00000588815 HILS1P60008 231 aa24.27■■□□□ 1.48
CAPNS1-206ENST00000588815 DUX5Q96PT3 197 aa24.27■■□□□ 1.48
CAPNS1-206ENST00000588815 TRGV9Q99603 122 aa24.27■■□□□ 1.48
CAPNS1-206ENST00000588815 TXN2Q99757 166 aa24.27■■□□□ 1.48
CAPNS1-206ENST00000588815 LINC00527Q9UJ94 153 aa24.27■■□□□ 1.48
CAPNS1-206ENST00000588815 HIVEP1P15822 2718 aa24.27■■□□□ 1.48
CAPNS1-206ENST00000588815 FAM223BA6NKX1 122 aa24.26■■□□□ 1.47
CAPNS1-206ENST00000588815 RNASE1P07998 156 aaKnown RBP24.26■■□□□ 1.47
CAPNS1-206ENST00000588815 MFAP4P55083 255 aa24.26■■□□□ 1.47
CAPNS1-206ENST00000588815 SELENOTP62341 195 aa24.26■■□□□ 1.47
CAPNS1-206ENST00000588815 BLOC1S1P78537 153 aa24.26■■□□□ 1.47
CAPNS1-206ENST00000588815 CFHR3Q02985 330 aa24.26■■□□□ 1.47
CAPNS1-206ENST00000588815 FAM223AQ8IWN6 122 aa24.26■■□□□ 1.47
CAPNS1-206ENST00000588815 NOL4LQ96MY1 436 aaPredicted RBP24.26■■□□□ 1.47
CAPNS1-206ENST00000588815 MRPL36Q9P0J6 103 aaKnown RBP24.26■■□□□ 1.47
CAPNS1-206ENST00000588815 TRAV30A0A087WSZ9 112 aa24.26■■□□□ 1.47
CAPNS1-206ENST00000588815 TCRBV4S1A1TA0A5B7 111 aa24.26■■□□□ 1.47
CAPNS1-206ENST00000588815 TMEM89A2RUT3 159 aa24.26■■□□□ 1.47
CAPNS1-206ENST00000588815 ZFP92A6NM28 416 aa24.26■■□□□ 1.47
CAPNS1-206ENST00000588815 CLN5O75503 358 aa24.26■■□□□ 1.47
CAPNS1-206ENST00000588815 TSPAN15O95858 294 aa24.26■■□□□ 1.47
CAPNS1-206ENST00000588815 RHOGP84095 191 aa24.26■■□□□ 1.47
CAPNS1-206ENST00000588815 ATP6V0BQ99437 205 aa24.26■■□□□ 1.47
CAPNS1-206ENST00000588815 ESM1Q9NQ30 184 aa24.26■■□□□ 1.47
CAPNS1-206ENST00000588815 SLC45A2Q9UMX9 530 aa24.26■■□□□ 1.47
CAPNS1-206ENST00000588815 RFNGQ9Y644 331 aa24.26■■□□□ 1.47
CAPNS1-206ENST00000588815 ANK3Q12955 4377 aaKnown RBP24.25■■□□□ 1.47
CAPNS1-206ENST00000588815 ZNF705EA8MWA4 302 aaPredicted RBP24.25■■□□□ 1.47
CAPNS1-206ENST00000588815 INAFM1C9JVW0 142 aa24.25■■□□□ 1.47
CAPNS1-206ENST00000588815 NDUFB8O95169 186 aa24.25■■□□□ 1.47
CAPNS1-206ENST00000588815 IGHV3-48P01763 117 aa24.25■■□□□ 1.47
CAPNS1-206ENST00000588815 OR10J1P30954 320 aa24.25■■□□□ 1.47
CAPNS1-206ENST00000588815 MTORP42345 2549 aa24.25■■□□□ 1.47
CAPNS1-206ENST00000588815 GSX1Q9H4S2 264 aaPredicted RBP24.25■■□□□ 1.47
CAPNS1-206ENST00000588815 C21orf62Q9NYP8 219 aa24.25■■□□□ 1.47
CAPNS1-206ENST00000588815 PXMP4Q9Y6I8 212 aa24.25■■□□□ 1.47
CAPNS1-206ENST00000588815 IGHV3-21A0A0B4J1V1 117 aa24.24■■□□□ 1.47
CAPNS1-206ENST00000588815 SCGB2A1O75556 95 aa24.24■■□□□ 1.47
CAPNS1-206ENST00000588815 IGLV1-40P01703 118 aa24.24■■□□□ 1.47
CAPNS1-206ENST00000588815 TMEM41BQ5BJD5 291 aa24.24■■□□□ 1.47
CAPNS1-206ENST00000588815 FFAR4Q5NUL3 377 aa24.24■■□□□ 1.47
CAPNS1-206ENST00000588815 CYP2G1PQ6ZSU1 146 aa24.24■■□□□ 1.47
CAPNS1-206ENST00000588815 GAR1Q9NY12 217 aaKnown RBP24.24■■□□□ 1.47
CAPNS1-206ENST00000588815 IGKV1D-37A0A075B6S9 117 aa24.23■■□□□ 1.47
CAPNS1-206ENST00000588815 B2MP61769 119 aa24.23■■□□□ 1.47
CAPNS1-206ENST00000588815 PRR20EP86478 221 aa24.23■■□□□ 1.47
CAPNS1-206ENST00000588815 PRR20CP86479 221 aa24.23■■□□□ 1.47
CAPNS1-206ENST00000588815 PRR20DP86480 221 aa24.23■■□□□ 1.47
CAPNS1-206ENST00000588815 PRR20BP86481 221 aa24.23■■□□□ 1.47
CAPNS1-206ENST00000588815 PRR20AP86496 221 aa24.23■■□□□ 1.47
CAPNS1-206ENST00000588815 NDUFA5Q16718 116 aa24.23■■□□□ 1.47
CAPNS1-206ENST00000588815 ACOT6Q3I5F7 207 aaPredicted RBP24.23■■□□□ 1.47
CAPNS1-206ENST00000588815 FAM181BA6NEQ2 426 aa24.22■■□□□ 1.47
CAPNS1-206ENST00000588815 FABP1P07148 127 aa24.22■■□□□ 1.47
CAPNS1-206ENST00000588815 SLC35B1P78383 322 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms