RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 RXFP4Q8TDU9 374 aa13.09□□□□□ -0.31
NFIX-210ENST00000588228 MRPL36Q9P0J6 103 aaKnown RBP13.09□□□□□ -0.31
NFIX-210ENST00000588228 ABCA2Q9BZC7 2435 aa13.09□□□□□ -0.31
NFIX-210ENST00000588228 TCRBV4S1A1TA0A5B7 111 aa13.08□□□□□ -0.31
NFIX-210ENST00000588228 RNF223E7ERA6 249 aa13.08□□□□□ -0.31
NFIX-210ENST00000588228 IGHV3-48P01763 117 aa13.08□□□□□ -0.31
NFIX-210ENST00000588228 SRP19P09132 144 aaKnown RBP13.08□□□□□ -0.31
NFIX-210ENST00000588228 TAGLN2P37802 199 aaKnown RBP13.08□□□□□ -0.31
NFIX-210ENST00000588228 GUCA2BQ16661 112 aa13.08□□□□□ -0.31
NFIX-210ENST00000588228 C19orf24Q9BVV8 132 aa13.08□□□□□ -0.31
NFIX-210ENST00000588228 VAX2Q9UIW0 290 aa13.08□□□□□ -0.31
NFIX-210ENST00000588228 CRYBG3Q68DQ2 2970 aa13.08□□□□□ -0.32
NFIX-210ENST00000588228 MED13LQ71F56 2210 aa13.08□□□□□ -0.32
NFIX-210ENST00000588228 SPG11Q96JI7 2443 aa13.08□□□□□ -0.32
NFIX-210ENST00000588228 IGKV1D-37A0A075B6S9 117 aa13.08□□□□□ -0.32
NFIX-210ENST00000588228 I3L2K1 104 aa13.08□□□□□ -0.32
NFIX-210ENST00000588228 AVPP01185 164 aa13.08□□□□□ -0.32
NFIX-210ENST00000588228 STAG3L2P0CL84 134 aa13.08□□□□□ -0.32
NFIX-210ENST00000588228 STAG3L3P0CL85 134 aa13.08□□□□□ -0.32
NFIX-210ENST00000588228 PSMB3P49720 205 aa13.08□□□□□ -0.32
NFIX-210ENST00000588228 SELENOTP62341 195 aa13.08□□□□□ -0.32
NFIX-210ENST00000588228 KLF17Q5JT82 389 aaPredicted RBP13.08□□□□□ -0.32
NFIX-210ENST00000588228 ASPHD1Q5U4P2 390 aa13.08□□□□□ -0.32
NFIX-210ENST00000588228 ATRAIDQ6UW56 229 aa13.08□□□□□ -0.32
NFIX-210ENST00000588228 SLC35E3Q7Z769 313 aa13.08□□□□□ -0.32
NFIX-210ENST00000588228 TTC9CQ8N5M4 171 aa13.08□□□□□ -0.32
NFIX-210ENST00000588228 MANBALQ9NQG1 85 aa13.08□□□□□ -0.32
NFIX-210ENST00000588228 CHD6Q8TD26 2715 aa13.07□□□□□ -0.32
NFIX-210ENST00000588228 SNAPINO95295 136 aa13.07□□□□□ -0.32
NFIX-210ENST00000588228 GATA2P23769 480 aaPredicted RBP13.07□□□□□ -0.32
NFIX-210ENST00000588228 PIFOQ8TCI5 191 aa13.07□□□□□ -0.32
NFIX-210ENST00000588228 RBM14Q96PK6 669 aaKnown RBP13.07□□□□□ -0.32
NFIX-210ENST00000588228 TRGV9Q99603 122 aa13.07□□□□□ -0.32
NFIX-210ENST00000588228 TMPRSS5Q9H3S3 457 aa13.07□□□□□ -0.32
NFIX-210ENST00000588228 CXorf1O96002 111 aa13.06□□□□□ -0.32
NFIX-210ENST00000588228 TGFAP01135 160 aa13.06□□□□□ -0.32
NFIX-210ENST00000588228 FBP1P09467 338 aa13.06□□□□□ -0.32
NFIX-210ENST00000588228 EGR2P11161 476 aaPredicted RBP13.06□□□□□ -0.32
NFIX-210ENST00000588228 SOHLH1Q5JUK2 328 aa13.06□□□□□ -0.32
NFIX-210ENST00000588228 IQCF2Q8IXL9 164 aa13.06□□□□□ -0.32
NFIX-210ENST00000588228 C5orf56Q8N8D9 126 aa13.06□□□□□ -0.32
NFIX-210ENST00000588228 NKX6-2Q9C056 277 aaPredicted RBP13.06□□□□□ -0.32
NFIX-210ENST00000588228 SEPSECSQ9HD40 501 aaKnown RBP13.06□□□□□ -0.32
NFIX-210ENST00000588228 MOB4Q9Y3A3 225 aa13.06□□□□□ -0.32
NFIX-210ENST00000588228 NDUFS6O75380 124 aaKnown RBP13.05□□□□□ -0.32
NFIX-210ENST00000588228 OR5G3P0C626 314 aa13.05□□□□□ -0.32
NFIX-210ENST00000588228 BPIFB3P59826 476 aa13.05□□□□□ -0.32
NFIX-210ENST00000588228 FAM78BQ5VT40 261 aa13.05□□□□□ -0.32
NFIX-210ENST00000588228 MAPK1IP1LQ8NDC0 245 aa13.05□□□□□ -0.32
NFIX-210ENST00000588228 SSX3Q99909 188 aa13.05□□□□□ -0.32
NFIX-210ENST00000588228 TNFRSF19Q9NS68 423 aa13.05□□□□□ -0.32
NFIX-210ENST00000588228 FUT9Q9Y231 359 aa13.05□□□□□ -0.32
NFIX-210ENST00000588228 WNK2Q9Y3S1 2297 aa13.05□□□□□ -0.32
NFIX-210ENST00000588228 USP9YO00507 2555 aaPredicted RBP13.05□□□□□ -0.32
NFIX-210ENST00000588228 VPS13CQ709C8 3753 aa13.05□□□□□ -0.32
NFIX-210ENST00000588228 IGHV3-21A0A0B4J1V1 117 aa13.05□□□□□ -0.32
NFIX-210ENST00000588228 K7EIM0 57 aa13.05□□□□□ -0.32
NFIX-210ENST00000588228 IGHV4-31P0DP07 118 aa13.05□□□□□ -0.32
NFIX-210ENST00000588228 MEF2BQ02080 365 aaPredicted RBP13.05□□□□□ -0.32
NFIX-210ENST00000588228 ZNF90Q03938 601 aa13.05□□□□□ -0.32
NFIX-210ENST00000588228 SPATA31B1PQ5VZV4 182 aa13.05□□□□□ -0.32
NFIX-210ENST00000588228 HIST2H2BCQ6DN03 193 aa13.05□□□□□ -0.32
NFIX-210ENST00000588228 SPNS3Q6ZMD2 512 aa13.05□□□□□ -0.32
NFIX-210ENST00000588228 KRTAP1-3Q8IUG1 177 aa13.05□□□□□ -0.32
NFIX-210ENST00000588228 CYB561D1Q8N8Q1 229 aa13.05□□□□□ -0.32
NFIX-210ENST00000588228 OR4X1Q8NH49 305 aa13.05□□□□□ -0.32
NFIX-210ENST00000588228 SGMS2Q8NHU3 365 aa13.05□□□□□ -0.32
NFIX-210ENST00000588228 NANPQ8TBE9 248 aa13.05□□□□□ -0.32
NFIX-210ENST00000588228 GATAD1Q8WUU5 269 aa13.05□□□□□ -0.32
NFIX-210ENST00000588228 Q96MF0 132 aa13.05□□□□□ -0.32
NFIX-210ENST00000588228 RNF2Q99496 336 aa13.05□□□□□ -0.32
NFIX-210ENST00000588228 HSPB9Q9BQS6 159 aa13.05□□□□□ -0.32
NFIX-210ENST00000588228 IGLV11-55A0A075B6I3 123 aa13.04□□□□□ -0.32
NFIX-210ENST00000588228 PSMB11A5LHX3 300 aa13.04□□□□□ -0.32
NFIX-210ENST00000588228 ARL14EPLP0DKL9 152 aa13.04□□□□□ -0.32
NFIX-210ENST00000588228 OR1L4Q8NGR5 311 aa13.04□□□□□ -0.32
NFIX-210ENST00000588228 FANCD2OSQ96PS1 177 aa13.04□□□□□ -0.32
NFIX-210ENST00000588228 PFDN5Q99471 154 aa13.04□□□□□ -0.32
NFIX-210ENST00000588228 MRPL32Q9BYC8 188 aaKnown RBP13.04□□□□□ -0.32
NFIX-210ENST00000588228 MIR17HGQ75NE6 70 aa13.03□□□□□ -0.32
NFIX-210ENST00000588228 TMEM219Q86XT9 240 aa13.03□□□□□ -0.32
NFIX-210ENST00000588228 TMEM37Q8WXS4 190 aa13.03□□□□□ -0.32
NFIX-210ENST00000588228 TMEM68Q96MH6 324 aa13.03□□□□□ -0.32
NFIX-210ENST00000588228 DNAJC4Q9NNZ3 241 aa13.03□□□□□ -0.32
NFIX-210ENST00000588228 TECRQ9NZ01 308 aaKnown RBP13.03□□□□□ -0.32
NFIX-210ENST00000588228 SOX21Q9Y651 276 aaPredicted RBP13.03□□□□□ -0.32
NFIX-210ENST00000588228 PLXNB1O43157 2135 aa13.03□□□□□ -0.32
NFIX-210ENST00000588228 IGLC1P0CG04 106 aa13.02□□□□□ -0.32
NFIX-210ENST00000588228 TAS2R45P59539 299 aa13.02□□□□□ -0.32
NFIX-210ENST00000588228 CD81P60033 236 aa13.02□□□□□ -0.32
NFIX-210ENST00000588228 CLRN3Q8NCR9 226 aa13.02□□□□□ -0.32
NFIX-210ENST00000588228 THYN1Q9P016 225 aa13.02□□□□□ -0.32
NFIX-210ENST00000588228 NAV3Q8IVL0 2385 aa13.02□□□□□ -0.33
NFIX-210ENST00000588228 A6NDX4 124 aa13.02□□□□□ -0.33
NFIX-210ENST00000588228 ATP6V0E1O15342 81 aa13.02□□□□□ -0.33
NFIX-210ENST00000588228 COX7A2P2O60397 106 aa13.02□□□□□ -0.33
NFIX-210ENST00000588228 PAGE4O60829 102 aa13.02□□□□□ -0.33
NFIX-210ENST00000588228 CLN5O75503 358 aa13.02□□□□□ -0.33
NFIX-210ENST00000588228 GCHFRP30047 84 aa13.02□□□□□ -0.33
NFIX-210ENST00000588228 NPBWR1P48145 328 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms