RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 IGKV1-16P04430 117 aa6.4□□□□□ -1.38
SDF2-204ENST00000587338 OR9G9P0C7N8 305 aa6.4□□□□□ -1.38
SDF2-204ENST00000587338 EDN2P20800 178 aa6.4□□□□□ -1.38
SDF2-204ENST00000587338 PSMB6P28072 239 aa6.4□□□□□ -1.38
SDF2-204ENST00000587338 NKX2-1P43699 371 aaPredicted RBP6.4□□□□□ -1.38
SDF2-204ENST00000587338 LGALS7P47929 136 aa6.4□□□□□ -1.38
SDF2-204ENST00000587338 OR2B8PP59922 312 aa6.4□□□□□ -1.38
SDF2-204ENST00000587338 VAMP2P63027 116 aa6.4□□□□□ -1.38
SDF2-204ENST00000587338 PRR20EP86478 221 aa6.4□□□□□ -1.38
SDF2-204ENST00000587338 PRR20CP86479 221 aa6.4□□□□□ -1.38
SDF2-204ENST00000587338 PRR20DP86480 221 aa6.4□□□□□ -1.38
SDF2-204ENST00000587338 PRR20BP86481 221 aa6.4□□□□□ -1.38
SDF2-204ENST00000587338 PRR20AP86496 221 aa6.4□□□□□ -1.38
SDF2-204ENST00000587338 DEFB114Q30KQ6 69 aa6.4□□□□□ -1.38
SDF2-204ENST00000587338 NMSQ5H8A3 153 aa6.4□□□□□ -1.38
SDF2-204ENST00000587338 OR4A47Q6IF82 309 aa6.4□□□□□ -1.38
SDF2-204ENST00000587338 Q6ZRM9 215 aa6.4□□□□□ -1.38
SDF2-204ENST00000587338 NOXA1Q86UR1 476 aa6.4□□□□□ -1.38
SDF2-204ENST00000587338 OSR1Q8TAX0 266 aaPredicted RBP6.4□□□□□ -1.38
SDF2-204ENST00000587338 PHLDA1Q8WV24 401 aaPredicted RBP6.4□□□□□ -1.38
SDF2-204ENST00000587338 HYLS1Q96M11 299 aa6.4□□□□□ -1.38
SDF2-204ENST00000587338 TSNAXQ99598 290 aaKnown RBP6.4□□□□□ -1.38
SDF2-204ENST00000587338 MAGT1Q9H0U3 335 aa6.4□□□□□ -1.38
SDF2-204ENST00000587338 ZC4H2Q9NQZ6 224 aa6.4□□□□□ -1.38
SDF2-204ENST00000587338 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.4□□□□□ -1.38
SDF2-204ENST00000587338 TMEM140Q9NV12 185 aa6.4□□□□□ -1.38
SDF2-204ENST00000587338 RCL1Q9Y2P8 373 aaKnown RBP6.4□□□□□ -1.38
SDF2-204ENST00000587338 DNAH6Q9C0G6 4158 aa6.39□□□□□ -1.39
SDF2-204ENST00000587338 VPS13DQ5THJ4 4388 aa6.39□□□□□ -1.39
SDF2-204ENST00000587338 TRAV14DV4A0A0A6YYC5 116 aa6.39□□□□□ -1.39
SDF2-204ENST00000587338 TRAV3A0A0B4J244 114 aa6.39□□□□□ -1.39
SDF2-204ENST00000587338 K7EPK0 472 aa6.39□□□□□ -1.39
SDF2-204ENST00000587338 BMPR1BO00238 502 aa6.39□□□□□ -1.39
SDF2-204ENST00000587338 ARPC5O15511 151 aa6.39□□□□□ -1.39
SDF2-204ENST00000587338 SSSCA1O60232 199 aa6.39□□□□□ -1.39
SDF2-204ENST00000587338 SPDEFO95238 335 aa6.39□□□□□ -1.39
SDF2-204ENST00000587338 IFNA17P01571 189 aa6.39□□□□□ -1.39
SDF2-204ENST00000587338 MBPP02686 304 aaPredicted RBP6.39□□□□□ -1.39
SDF2-204ENST00000587338 PET100P0DJ07 73 aa6.39□□□□□ -1.39
SDF2-204ENST00000587338 APELAP0DMC3 54 aa6.39□□□□□ -1.39
SDF2-204ENST00000587338 FOLR2P14207 255 aa6.39□□□□□ -1.39
SDF2-204ENST00000587338 PVALBP20472 110 aaPredicted RBP6.39□□□□□ -1.39
SDF2-204ENST00000587338 BMI1P35226 326 aa6.39□□□□□ -1.39
SDF2-204ENST00000587338 NUP62P37198 522 aaPredicted RBP6.39□□□□□ -1.39
SDF2-204ENST00000587338 AP2S1P53680 142 aaPredicted RBP6.39□□□□□ -1.39
SDF2-204ENST00000587338 POLR2GP62487 172 aaKnown RBP eCLIP6.39□□□□□ -1.39
SDF2-204ENST00000587338 PJVKQ0ZLH3 352 aa6.39□□□□□ -1.39
SDF2-204ENST00000587338 EXOSC2Q13868 293 aaKnown RBP6.39□□□□□ -1.39
SDF2-204ENST00000587338 DEFB135Q30KP9 77 aa6.39□□□□□ -1.39
SDF2-204ENST00000587338 VMA21Q3ZAQ7 101 aa6.39□□□□□ -1.39
SDF2-204ENST00000587338 TMEM177Q53S58 311 aa6.39□□□□□ -1.39
SDF2-204ENST00000587338 OR4D5Q8NGN0 318 aa6.39□□□□□ -1.39
SDF2-204ENST00000587338 USMG5Q96IX5 58 aa6.39□□□□□ -1.39
SDF2-204ENST00000587338 RNF5Q99942 180 aa6.39□□□□□ -1.39
SDF2-204ENST00000587338 HINT2Q9BX68 163 aa6.39□□□□□ -1.39
SDF2-204ENST00000587338 QTRT1Q9BXR0 403 aaKnown RBP6.39□□□□□ -1.39
SDF2-204ENST00000587338 MBD2Q9UBB5 411 aa6.39□□□□□ -1.39
SDF2-204ENST00000587338 MSGN1A6NI15 193 aa6.38□□□□□ -1.39
SDF2-204ENST00000587338 C2orf70A6NJV1 201 aa6.38□□□□□ -1.39
SDF2-204ENST00000587338 SRRM4A7MD48 611 aaKnown RBP6.38□□□□□ -1.39
SDF2-204ENST00000587338 CEBPZOSA8MTT3 80 aa6.38□□□□□ -1.39
SDF2-204ENST00000587338 UPK2O00526 184 aa6.38□□□□□ -1.39
SDF2-204ENST00000587338 SPRY2O43597 315 aa6.38□□□□□ -1.39
SDF2-204ENST00000587338 SAA1P0DJI8 122 aaPredicted RBP6.38□□□□□ -1.39
SDF2-204ENST00000587338 MED14OSP0DP75 135 aa6.38□□□□□ -1.39
SDF2-204ENST00000587338 IAPPP10997 89 aa6.38□□□□□ -1.39
SDF2-204ENST00000587338 SLC25A6P12236 298 aa6.38□□□□□ -1.39
SDF2-204ENST00000587338 SSBP2P81877 361 aaPredicted RBP6.38□□□□□ -1.39
SDF2-204ENST00000587338 SPINK9Q5DT21 86 aa6.38□□□□□ -1.39
SDF2-204ENST00000587338 PRSS54Q6PEW0 395 aa6.38□□□□□ -1.39
SDF2-204ENST00000587338 ZNF546Q86UE3 836 aa6.38□□□□□ -1.39
SDF2-204ENST00000587338 WFDC3Q8IUB2 231 aa6.38□□□□□ -1.39
SDF2-204ENST00000587338 TMEM61Q8N0U2 210 aa6.38□□□□□ -1.39
SDF2-204ENST00000587338 TMEM217Q8N7C4 229 aa6.38□□□□□ -1.39
SDF2-204ENST00000587338 INO80EQ8NBZ0 244 aaPredicted RBP6.38□□□□□ -1.39
SDF2-204ENST00000587338 OR11H4Q8NGC9 324 aa6.38□□□□□ -1.39
SDF2-204ENST00000587338 VSTM2AQ8TAG5 236 aa6.38□□□□□ -1.39
SDF2-204ENST00000587338 TECRQ9NZ01 308 aaKnown RBP6.38□□□□□ -1.39
SDF2-204ENST00000587338 OR5AC2Q9NZP5 309 aa6.38□□□□□ -1.39
SDF2-204ENST00000587338 PAIP2BQ9ULR5 123 aaKnown RBP6.38□□□□□ -1.39
SDF2-204ENST00000587338 G3V3Q6 166 aa6.37□□□□□ -1.39
SDF2-204ENST00000587338 H0YIZ8 118 aa6.37□□□□□ -1.39
SDF2-204ENST00000587338 TSC22D2O75157 780 aa6.37□□□□□ -1.39
SDF2-204ENST00000587338 PITX3O75364 302 aa6.37□□□□□ -1.39
SDF2-204ENST00000587338 MED6O75586 246 aa6.37□□□□□ -1.39
SDF2-204ENST00000587338 ACTL6BO94805 426 aa6.37□□□□□ -1.39
SDF2-204ENST00000587338 KBTBD11O94819 623 aa6.37□□□□□ -1.39
SDF2-204ENST00000587338 SCAF4O95104 1147 aaKnown RBP6.37□□□□□ -1.39
SDF2-204ENST00000587338 SLC25A4P12235 298 aa6.37□□□□□ -1.39
SDF2-204ENST00000587338 MYOD1P15172 320 aa6.37□□□□□ -1.39
SDF2-204ENST00000587338 ATF4P18848 351 aaPredicted RBP6.37□□□□□ -1.39
SDF2-204ENST00000587338 HOXA1P49639 335 aaPredicted RBP6.37□□□□□ -1.39
SDF2-204ENST00000587338 UBE2KP61086 200 aa6.37□□□□□ -1.39
SDF2-204ENST00000587338 RHOGP84095 191 aa6.37□□□□□ -1.39
SDF2-204ENST00000587338 POU2AF1Q16633 256 aa6.37□□□□□ -1.39
SDF2-204ENST00000587338 CACNG8Q8WXS5 425 aa6.37□□□□□ -1.39
SDF2-204ENST00000587338 TMEM68Q96MH6 324 aa6.37□□□□□ -1.39
SDF2-204ENST00000587338 RNF126Q9BV68 326 aa6.37□□□□□ -1.39
SDF2-204ENST00000587338 COMMD5Q9GZQ3 224 aa6.37□□□□□ -1.39
SDF2-204ENST00000587338 RBKSQ9H477 322 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms