RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 GPR61Q9BZJ8 451 aa14.71□□□□□ -0.05
DDX39A-204ENST00000586558 FNDC4Q9H6D8 234 aaPredicted RBP14.71□□□□□ -0.05
DDX39A-204ENST00000586558 RCL1Q9Y2P8 373 aaKnown RBP14.71□□□□□ -0.05
DDX39A-204ENST00000586558 STRAPQ9Y3F4 350 aaKnown RBP14.71□□□□□ -0.05
DDX39A-204ENST00000586558 F8W735 103 aaPredicted RBP14.7□□□□□ -0.06
DDX39A-204ENST00000586558 OVOL1O14753 267 aa14.7□□□□□ -0.06
DDX39A-204ENST00000586558 C1QL4Q86Z23 238 aa14.7□□□□□ -0.06
DDX39A-204ENST00000586558 UBAC2Q8NBM4 344 aa14.7□□□□□ -0.06
DDX39A-204ENST00000586558 NMES1Q9C002 83 aa14.7□□□□□ -0.06
DDX39A-204ENST00000586558 OR2T8A6NH00 312 aa14.69□□□□□ -0.06
DDX39A-204ENST00000586558 TSC22D2O75157 780 aa14.69□□□□□ -0.06
DDX39A-204ENST00000586558 SCGB2A1O75556 95 aa14.69□□□□□ -0.06
DDX39A-204ENST00000586558 SPANXN5Q5MJ07 72 aa14.69□□□□□ -0.06
DDX39A-204ENST00000586558 GPHB5Q86YW7 130 aa14.69□□□□□ -0.06
DDX39A-204ENST00000586558 OR4X1Q8NH49 305 aa14.69□□□□□ -0.06
DDX39A-204ENST00000586558 OR4C12Q96R67 309 aa14.69□□□□□ -0.06
DDX39A-204ENST00000586558 PSENENQ9NZ42 101 aa14.69□□□□□ -0.06
DDX39A-204ENST00000586558 MGAT4CQ9UBM8 478 aa14.69□□□□□ -0.06
DDX39A-204ENST00000586558 NBEAL1Q6ZS30 2694 aa14.69□□□□□ -0.06
DDX39A-204ENST00000586558 K7EPK0 472 aa14.68□□□□□ -0.06
DDX39A-204ENST00000586558 NUPL2O15504 423 aaKnown RBP14.68□□□□□ -0.06
DDX39A-204ENST00000586558 GNG7O60262 68 aa14.68□□□□□ -0.06
DDX39A-204ENST00000586558 OR2C1O95371 312 aa14.68□□□□□ -0.06
DDX39A-204ENST00000586558 SIX6O95475 246 aa14.68□□□□□ -0.06
DDX39A-204ENST00000586558 TMEM50AO95807 157 aa14.68□□□□□ -0.06
DDX39A-204ENST00000586558 IGHV3-48P01763 117 aa14.68□□□□□ -0.06
DDX39A-204ENST00000586558 PVALBP20472 110 aaPredicted RBP14.68□□□□□ -0.06
DDX39A-204ENST00000586558 GPX4P36969 197 aaPredicted RBP14.68□□□□□ -0.06
DDX39A-204ENST00000586558 H2BFSP57053 126 aa14.68□□□□□ -0.06
DDX39A-204ENST00000586558 SYNJ2BPP57105 145 aa14.68□□□□□ -0.06
DDX39A-204ENST00000586558 CD69Q07108 199 aa14.68□□□□□ -0.06
DDX39A-204ENST00000586558 FAM106AQ4KMX7 169 aa14.68□□□□□ -0.06
DDX39A-204ENST00000586558 TMEM116Q8NCL8 245 aa14.68□□□□□ -0.06
DDX39A-204ENST00000586558 CACNG8Q8WXS5 425 aa14.68□□□□□ -0.06
DDX39A-204ENST00000586558 MED28Q9H204 178 aa14.68□□□□□ -0.06
DDX39A-204ENST00000586558 PAIP2BQ9ULR5 123 aaKnown RBP14.68□□□□□ -0.06
DDX39A-204ENST00000586558 LSM5Q9Y4Y9 91 aaKnown RBP14.68□□□□□ -0.06
DDX39A-204ENST00000586558 H3BP45 60 aa14.67□□□□□ -0.06
DDX39A-204ENST00000586558 L7N2F9 121 aa14.67□□□□□ -0.06
DDX39A-204ENST00000586558 CTSGP08311 255 aa14.67□□□□□ -0.06
DDX39A-204ENST00000586558 ADMP35318 185 aa14.67□□□□□ -0.06
DDX39A-204ENST00000586558 PAX9P55771 341 aa14.67□□□□□ -0.06
DDX39A-204ENST00000586558 S100A10P60903 97 aa14.67□□□□□ -0.06
DDX39A-204ENST00000586558 VAMP2P63027 116 aa14.67□□□□□ -0.06
DDX39A-204ENST00000586558 RAB32Q13637 225 aa14.67□□□□□ -0.06
DDX39A-204ENST00000586558 SLC16A13Q7RTY0 426 aa14.67□□□□□ -0.06
DDX39A-204ENST00000586558 CHRDL1Q9BU40 450 aa14.67□□□□□ -0.06
DDX39A-204ENST00000586558 SEC14L6B5MCN3 397 aa14.66□□□□□ -0.06
DDX39A-204ENST00000586558 LGALS9O00182 355 aa14.66□□□□□ -0.06
DDX39A-204ENST00000586558 CLN5O75503 358 aa14.66□□□□□ -0.06
DDX39A-204ENST00000586558 IGLL1P15814 213 aa14.66□□□□□ -0.06
DDX39A-204ENST00000586558 RELQ04864 619 aaPredicted RBP14.66□□□□□ -0.06
DDX39A-204ENST00000586558 PRSS54Q6PEW0 395 aa14.66□□□□□ -0.06
DDX39A-204ENST00000586558 REC114Q7Z4M0 266 aa14.66□□□□□ -0.06
DDX39A-204ENST00000586558 OR9G4Q8NGQ1 327 aa14.66□□□□□ -0.06
DDX39A-204ENST00000586558 ELOVL1Q9BW60 279 aa14.66□□□□□ -0.06
DDX39A-204ENST00000586558 PEMTQ9UBM1 199 aa14.66□□□□□ -0.06
DDX39A-204ENST00000586558 NOTCH3Q9UM47 2321 aa14.65□□□□□ -0.06
DDX39A-204ENST00000586558 TRAV30A0A087WSZ9 112 aa14.65□□□□□ -0.06
DDX39A-204ENST00000586558 SCAF4O95104 1147 aaKnown RBP14.65□□□□□ -0.06
DDX39A-204ENST00000586558 INSL3P51460 131 aa14.65□□□□□ -0.06
DDX39A-204ENST00000586558 RND2P52198 227 aa14.65□□□□□ -0.06
DDX39A-204ENST00000586558 MLANAQ16655 118 aa14.65□□□□□ -0.06
DDX39A-204ENST00000586558 C9orf66Q5T8R8 295 aa14.65□□□□□ -0.06
DDX39A-204ENST00000586558 TMEM14EPQ6UXP3 125 aa14.65□□□□□ -0.06
DDX39A-204ENST00000586558 SLC35E1Q96K37 410 aa14.65□□□□□ -0.06
DDX39A-204ENST00000586558 ZNF436Q9C0F3 470 aaPredicted RBP14.65□□□□□ -0.06
DDX39A-204ENST00000586558 C11orf1Q9H5F2 150 aa14.65□□□□□ -0.06
DDX39A-204ENST00000586558 ZC4H2Q9NQZ6 224 aa14.65□□□□□ -0.06
DDX39A-204ENST00000586558 A8MWP6 167 aa14.64□□□□□ -0.07
DDX39A-204ENST00000586558 PRSS46E5RG02 174 aa14.64□□□□□ -0.07
DDX39A-204ENST00000586558 NDUFA4O00483 81 aa14.64□□□□□ -0.07
DDX39A-204ENST00000586558 WIPF1O43516 503 aa14.64□□□□□ -0.07
DDX39A-204ENST00000586558 RLN2P04090 185 aa14.64□□□□□ -0.07
DDX39A-204ENST00000586558 SAMD5Q5TGI4 173 aa14.64□□□□□ -0.07
DDX39A-204ENST00000586558 ACY3Q96HD9 319 aa14.64□□□□□ -0.07
DDX39A-204ENST00000586558 MRPL36Q9P0J6 103 aaKnown RBP14.64□□□□□ -0.07
DDX39A-204ENST00000586558 DEDDO75618 318 aa14.63□□□□□ -0.07
DDX39A-204ENST00000586558 PET100P0DJ07 73 aa14.63□□□□□ -0.07
DDX39A-204ENST00000586558 ASB13Q8WXK3 278 aa14.63□□□□□ -0.07
DDX39A-204ENST00000586558 TMEM190Q8WZ59 177 aa14.63□□□□□ -0.07
DDX39A-204ENST00000586558 SIGLEC8Q9NYZ4 499 aa14.63□□□□□ -0.07
DDX39A-204ENST00000586558 UFC1Q9Y3C8 167 aa14.63□□□□□ -0.07
DDX39A-204ENST00000586558 ZNF320A2RRD8 509 aa14.62□□□□□ -0.07
DDX39A-204ENST00000586558 CXCL3P19876 107 aa14.62□□□□□ -0.07
DDX39A-204ENST00000586558 CAV2P51636 162 aa14.62□□□□□ -0.07
DDX39A-204ENST00000586558 ELLP55199 621 aaPredicted RBP14.62□□□□□ -0.07
DDX39A-204ENST00000586558 RRAS2P62070 204 aaPredicted RBP14.62□□□□□ -0.07
DDX39A-204ENST00000586558 GAMTQ14353 236 aa14.62□□□□□ -0.07
DDX39A-204ENST00000586558 FCN2Q15485 313 aa14.62□□□□□ -0.07
DDX39A-204ENST00000586558 OXLD1Q5BKU9 147 aa14.62□□□□□ -0.07
DDX39A-204ENST00000586558 ZNF600Q6ZNG1 722 aa14.62□□□□□ -0.07
DDX39A-204ENST00000586558 OR1S2Q8NGQ3 325 aa14.62□□□□□ -0.07
DDX39A-204ENST00000586558 PPP1R1CQ8WVI7 109 aa14.62□□□□□ -0.07
DDX39A-204ENST00000586558 NPIPB3Q92617 1050 aa14.62□□□□□ -0.07
DDX39A-204ENST00000586558 LYRM2Q9NU23 88 aaPredicted RBP14.62□□□□□ -0.07
DDX39A-204ENST00000586558 NOTCH1P46531 2555 aa14.62□□□□□ -0.07
DDX39A-204ENST00000586558 IGHV3-35A0A0C4DH35 117 aa14.61□□□□□ -0.07
DDX39A-204ENST00000586558 E5RGE8 158 aa14.61□□□□□ -0.07
DDX39A-204ENST00000586558 SAP30O75446 220 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms