RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 TMEM250H0YL14 139 aa17.7■□□□□ 0.42
CIRBP-208ENST00000586548 TSPAN4O14817 238 aa17.7■□□□□ 0.42
CIRBP-208ENST00000586548 PAGE4O60829 102 aa17.7■□□□□ 0.42
CIRBP-208ENST00000586548 C19orf35Q6ZS72 473 aa17.7■□□□□ 0.42
CIRBP-208ENST00000586548 SLC25A33Q9BSK2 321 aa17.7■□□□□ 0.42
CIRBP-208ENST00000586548 RPS10P5Q9NQ39 176 aa17.7■□□□□ 0.42
CIRBP-208ENST00000586548 MRPL36Q9P0J6 103 aaKnown RBP17.7■□□□□ 0.42
CIRBP-208ENST00000586548 FUT9Q9Y231 359 aa17.7■□□□□ 0.42
CIRBP-208ENST00000586548 IGKV1D-37A0A075B6S9 117 aa17.69■□□□□ 0.42
CIRBP-208ENST00000586548 J3QKU1 62 aa17.69■□□□□ 0.42
CIRBP-208ENST00000586548 GATA2P23769 480 aaPredicted RBP17.69■□□□□ 0.42
CIRBP-208ENST00000586548 SELENOTP62341 195 aa17.69■□□□□ 0.42
CIRBP-208ENST00000586548 AKIRIN2Q53H80 203 aa17.69■□□□□ 0.42
CIRBP-208ENST00000586548 SPATA31B1PQ5VZV4 182 aa17.69■□□□□ 0.42
CIRBP-208ENST00000586548 ZNF562Q6V9R5 426 aa17.69■□□□□ 0.42
CIRBP-208ENST00000586548 C20orf24Q9BUV8 137 aa17.69■□□□□ 0.42
CIRBP-208ENST00000586548 NCBP2LA6PVI3 153 aaKnown RBP17.69■□□□□ 0.42
CIRBP-208ENST00000586548 OR5G3P0C626 314 aa17.69■□□□□ 0.42
CIRBP-208ENST00000586548 CTRB1P17538 263 aa17.69■□□□□ 0.42
CIRBP-208ENST00000586548 FAM78BQ5VT40 261 aa17.69■□□□□ 0.42
CIRBP-208ENST00000586548 CTRB2Q6GPI1 263 aa17.69■□□□□ 0.42
CIRBP-208ENST00000586548 PIP4P2Q8N4L2 257 aa17.69■□□□□ 0.42
CIRBP-208ENST00000586548 TMEM116Q8NCL8 245 aa17.69■□□□□ 0.42
CIRBP-208ENST00000586548 TVP23CQ96ET8 276 aa17.69■□□□□ 0.42
CIRBP-208ENST00000586548 C1RLQ9NZP8 487 aa17.69■□□□□ 0.42
CIRBP-208ENST00000586548 DMRT1Q9Y5R6 373 aa17.69■□□□□ 0.42
CIRBP-208ENST00000586548 IGHV3-48P01763 117 aa17.68■□□□□ 0.42
CIRBP-208ENST00000586548 SLC25A16P16260 332 aa17.68■□□□□ 0.42
CIRBP-208ENST00000586548 OR1L6Q8NGR2 347 aa17.68■□□□□ 0.42
CIRBP-208ENST00000586548 RNF2Q99496 336 aa17.68■□□□□ 0.42
CIRBP-208ENST00000586548 WNT10AQ9GZT5 417 aa17.68■□□□□ 0.42
CIRBP-208ENST00000586548 SMCO4Q9NRQ5 59 aa17.68■□□□□ 0.42
CIRBP-208ENST00000586548 GCHFRP30047 84 aa17.67■□□□□ 0.42
CIRBP-208ENST00000586548 OR4F5Q8NH21 305 aa17.67■□□□□ 0.42
CIRBP-208ENST00000586548 ARPC1AQ92747 370 aa17.67■□□□□ 0.42
CIRBP-208ENST00000586548 OR4F4Q96R69 305 aa17.67■□□□□ 0.42
CIRBP-208ENST00000586548 TXNDC17Q9BRA2 123 aa17.67■□□□□ 0.42
CIRBP-208ENST00000586548 MRPL32Q9BYC8 188 aaKnown RBP17.67■□□□□ 0.42
CIRBP-208ENST00000586548 IGHV1-69DA0A0B4J2H0 117 aa17.67■□□□□ 0.42
CIRBP-208ENST00000586548 PSMB11A5LHX3 300 aa17.67■□□□□ 0.42
CIRBP-208ENST00000586548 C11orf94C9JXX5 98 aa17.67■□□□□ 0.42
CIRBP-208ENST00000586548 IGHV1-69P01742 117 aa17.67■□□□□ 0.42
CIRBP-208ENST00000586548 CX3CL1P78423 397 aa17.67■□□□□ 0.42
CIRBP-208ENST00000586548 FAM120AOSQ5T036 256 aa17.67■□□□□ 0.42
CIRBP-208ENST00000586548 MIR17HGQ75NE6 70 aa17.67■□□□□ 0.42
CIRBP-208ENST00000586548 TRGV9Q99603 122 aa17.67■□□□□ 0.42
CIRBP-208ENST00000586548 TECRQ9NZ01 308 aaKnown RBP17.67■□□□□ 0.42
CIRBP-208ENST00000586548 MSMBP08118 114 aa17.66■□□□□ 0.42
CIRBP-208ENST00000586548 CLEC12BQ2HXU8 276 aa17.66■□□□□ 0.42
CIRBP-208ENST00000586548 PFDN5Q99471 154 aa17.66■□□□□ 0.42
CIRBP-208ENST00000586548 TNFRSF19Q9NS68 423 aa17.66■□□□□ 0.42
CIRBP-208ENST00000586548 I3L2K1 104 aa17.65■□□□□ 0.42
CIRBP-208ENST00000586548 AKR1C3P42330 323 aa17.65■□□□□ 0.42
CIRBP-208ENST00000586548 ZNF90Q03938 601 aa17.65■□□□□ 0.42
CIRBP-208ENST00000586548 Q8N9W7 124 aa17.65■□□□□ 0.42
CIRBP-208ENST00000586548 OR1L4Q8NGR5 311 aa17.65■□□□□ 0.42
CIRBP-208ENST00000586548 FAM103A1Q9BTL3 118 aaKnown RBP17.65■□□□□ 0.42
CIRBP-208ENST00000586548 NPIPB5A8MRT5 1133 aa17.64■□□□□ 0.41
CIRBP-208ENST00000586548 PDE6DO43924 150 aa17.64■□□□□ 0.41
CIRBP-208ENST00000586548 CLN5O75503 358 aa17.64■□□□□ 0.41
CIRBP-208ENST00000586548 TAS2R45P59539 299 aa17.64■□□□□ 0.41
CIRBP-208ENST00000586548 UBE2G2P60604 165 aa17.64■□□□□ 0.41
CIRBP-208ENST00000586548 PNRC1Q12796 327 aaPredicted RBP17.64■□□□□ 0.41
CIRBP-208ENST00000586548 RUSC1-AS1Q66K80 236 aa17.64■□□□□ 0.41
CIRBP-208ENST00000586548 TMEM37Q8WXS4 190 aa17.64■□□□□ 0.41
CIRBP-208ENST00000586548 DNAJC4Q9NNZ3 241 aa17.64■□□□□ 0.41
CIRBP-208ENST00000586548 ZNF727A8MUV8 499 aa17.64■□□□□ 0.41
CIRBP-208ENST00000586548 HLA-DRB1P01911 266 aa17.64■□□□□ 0.41
CIRBP-208ENST00000586548 BPIFB3P59826 476 aa17.64■□□□□ 0.41
CIRBP-208ENST00000586548 NDPQ00604 133 aa17.64■□□□□ 0.41
CIRBP-208ENST00000586548 PQLC2Q6ZP29 291 aa17.64■□□□□ 0.41
CIRBP-208ENST00000586548 IGHV3-21A0A0B4J1V1 117 aa17.63■□□□□ 0.41
CIRBP-208ENST00000586548 TRAV40A0A0B4J280 105 aa17.63■□□□□ 0.41
CIRBP-208ENST00000586548 B4DSR2 109 aa17.63■□□□□ 0.41
CIRBP-208ENST00000586548 COX7A2P2O60397 106 aa17.63■□□□□ 0.41
CIRBP-208ENST00000586548 CST9LP1Q5W188 147 aa17.63■□□□□ 0.41
CIRBP-208ENST00000586548 SMIM7Q9BQ49 75 aa17.63■□□□□ 0.41
CIRBP-208ENST00000586548 TUBA4BQ9H853 241 aa17.63■□□□□ 0.41
CIRBP-208ENST00000586548 TMEM167BQ9NRX6 74 aa17.63■□□□□ 0.41
CIRBP-208ENST00000586548 ARL2-SNX15V9GYD0 113 aa17.63■□□□□ 0.41
CIRBP-208ENST00000586548 ASH1LQ9NR48 2969 aaKnown RBP17.62■□□□□ 0.41
CIRBP-208ENST00000586548 F6UZH7 168 aa17.62■□□□□ 0.41
CIRBP-208ENST00000586548 C8orf88P0DMB2 117 aa17.62■□□□□ 0.41
CIRBP-208ENST00000586548 ATP5G3P48201 142 aa17.62■□□□□ 0.41
CIRBP-208ENST00000586548 ASPHD1Q5U4P2 390 aa17.62■□□□□ 0.41
CIRBP-208ENST00000586548 TTC9CQ8N5M4 171 aa17.62■□□□□ 0.41
CIRBP-208ENST00000586548 OR4X1Q8NH49 305 aa17.62■□□□□ 0.41
CIRBP-208ENST00000586548 SDF2L1Q9HCN8 221 aa17.62■□□□□ 0.41
CIRBP-208ENST00000586548 SPG11Q96JI7 2443 aa17.62■□□□□ 0.41
CIRBP-208ENST00000586548 A0A087WWC5 75 aa17.61■□□□□ 0.41
CIRBP-208ENST00000586548 B4DEV8 164 aa17.61■□□□□ 0.41
CIRBP-208ENST00000586548 C10orf113Q5VZT2 155 aa17.61■□□□□ 0.41
CIRBP-208ENST00000586548 RPUSD4Q96CM3 377 aaKnown RBP17.61■□□□□ 0.41
CIRBP-208ENST00000586548 RASL11BQ9BPW5 248 aa17.61■□□□□ 0.41
CIRBP-208ENST00000586548 NAT8Q9UHE5 227 aa17.61■□□□□ 0.41
CIRBP-208ENST00000586548 IGHV7-81A0A0B4J1V7 117 aa17.61■□□□□ 0.41
CIRBP-208ENST00000586548 TRAV20A0A0B4J274 112 aa17.61■□□□□ 0.41
CIRBP-208ENST00000586548 K7EIM0 57 aa17.61■□□□□ 0.41
CIRBP-208ENST00000586548 C15orf54Q8N8G6 183 aa17.61■□□□□ 0.41
CIRBP-208ENST00000586548 PARLQ9H300 379 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms