RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 RBM7Q9Y580 266 aaKnown RBP13.27□□□□□ -0.29
TOP3A-220ENST00000585031 DEFB4AO15263 64 aa13.26□□□□□ -0.29
TOP3A-220ENST00000585031 B3GALNT1O75752 331 aa13.26□□□□□ -0.29
TOP3A-220ENST00000585031 CRYZL1O95825 349 aa13.26□□□□□ -0.29
TOP3A-220ENST00000585031 SAA1P0DJI8 122 aaPredicted RBP13.26□□□□□ -0.29
TOP3A-220ENST00000585031 ZNF124Q15973 351 aa13.26□□□□□ -0.29
TOP3A-220ENST00000585031 VMA21Q3ZAQ7 101 aa13.26□□□□□ -0.29
TOP3A-220ENST00000585031 FAM106AQ4KMX7 169 aa13.26□□□□□ -0.29
TOP3A-220ENST00000585031 FAM209BQ5JX69 171 aa13.26□□□□□ -0.29
TOP3A-220ENST00000585031 RBPMS2Q6ZRY4 209 aaKnown RBP13.26□□□□□ -0.29
TOP3A-220ENST00000585031 LGI3Q8N145 548 aa13.26□□□□□ -0.29
TOP3A-220ENST00000585031 ZBTB8BQ8NAP8 495 aaPredicted RBP13.26□□□□□ -0.29
TOP3A-220ENST00000585031 IGHV3-35A0A0C4DH35 117 aa13.25□□□□□ -0.29
TOP3A-220ENST00000585031 PRSS29PA6NIE9 313 aa13.25□□□□□ -0.29
TOP3A-220ENST00000585031 CCSO14618 274 aa13.25□□□□□ -0.29
TOP3A-220ENST00000585031 IFNA4P05014 189 aa13.25□□□□□ -0.29
TOP3A-220ENST00000585031 GNRHRP30968 328 aa13.25□□□□□ -0.29
TOP3A-220ENST00000585031 SPIN2AQ99865 258 aa13.25□□□□□ -0.29
TOP3A-220ENST00000585031 SPIN2BQ9BPZ2 258 aa13.25□□□□□ -0.29
TOP3A-220ENST00000585031 ZNF257Q9Y2Q1 563 aa13.25□□□□□ -0.29
TOP3A-220ENST00000585031 HSPB11Q9Y547 144 aa13.25□□□□□ -0.29
TOP3A-220ENST00000585031 IGKV1D-13A0A0B4J2D9 117 aa13.24□□□□□ -0.29
TOP3A-220ENST00000585031 C3orf85A0A1B0GTC6 90 aa13.24□□□□□ -0.29
TOP3A-220ENST00000585031 MFSD2BA6NFX1 497 aa13.24□□□□□ -0.29
TOP3A-220ENST00000585031 IGLL5B9A064 214 aa13.24□□□□□ -0.29
TOP3A-220ENST00000585031 OR5AC1P0C628 307 aa13.24□□□□□ -0.29
TOP3A-220ENST00000585031 IGKV1-13P0DP09 117 aa13.24□□□□□ -0.29
TOP3A-220ENST00000585031 DUTP33316 252 aaKnown RBP13.24□□□□□ -0.29
TOP3A-220ENST00000585031 TMEM187Q14656 261 aa13.24□□□□□ -0.29
TOP3A-220ENST00000585031 MSMO1Q15800 293 aa13.24□□□□□ -0.29
TOP3A-220ENST00000585031 RTL8BQ17RB0 113 aa13.24□□□□□ -0.29
TOP3A-220ENST00000585031 TBC1D26Q86UD7 250 aa13.24□□□□□ -0.29
TOP3A-220ENST00000585031 C9orf62Q8N4C0 152 aa13.24□□□□□ -0.29
TOP3A-220ENST00000585031 LRTM2Q8N967 370 aa13.24□□□□□ -0.29
TOP3A-220ENST00000585031 ZBTB34Q8NCN2 500 aa13.24□□□□□ -0.29
TOP3A-220ENST00000585031 OR5B3Q8NH48 314 aa13.24□□□□□ -0.29
TOP3A-220ENST00000585031 NMES1Q9C002 83 aa13.24□□□□□ -0.29
TOP3A-220ENST00000585031 MFFQ9GZY8 342 aa13.24□□□□□ -0.29
TOP3A-220ENST00000585031 CCL28Q9NRJ3 127 aa13.24□□□□□ -0.29
TOP3A-220ENST00000585031 APOBP04114 4563 aaKnown RBP13.23□□□□□ -0.29
TOP3A-220ENST00000585031 HMSDA8MTL9 139 aa13.23□□□□□ -0.29
TOP3A-220ENST00000585031 AREGP15514 252 aa13.23□□□□□ -0.29
TOP3A-220ENST00000585031 ZNF818PQ6ZRF7 136 aa13.23□□□□□ -0.29
TOP3A-220ENST00000585031 APRG1Q8IVJ8 170 aa13.23□□□□□ -0.29
TOP3A-220ENST00000585031 C2orf50Q96LR7 162 aa13.23□□□□□ -0.29
TOP3A-220ENST00000585031 SPAG8Q99932 426 aaPredicted RBP13.23□□□□□ -0.29
TOP3A-220ENST00000585031 RARRES2Q99969 163 aa13.23□□□□□ -0.29
TOP3A-220ENST00000585031 MRPL27Q9P0M9 148 aaKnown RBP13.23□□□□□ -0.29
TOP3A-220ENST00000585031 FXYD6-FXYD2A0A087WZ82 144 aa13.22□□□□□ -0.29
TOP3A-220ENST00000585031 DUXBA0A1W2PPF3 345 aa13.22□□□□□ -0.29
TOP3A-220ENST00000585031 NPIPB5A8MRT5 1133 aa13.22□□□□□ -0.29
TOP3A-220ENST00000585031 G3V3Q6 166 aa13.22□□□□□ -0.29
TOP3A-220ENST00000585031 TSPAN4O14817 238 aa13.22□□□□□ -0.29
TOP3A-220ENST00000585031 CLEC3BP05452 202 aa13.22□□□□□ -0.29
TOP3A-220ENST00000585031 HOXB5P09067 269 aa13.22□□□□□ -0.29
TOP3A-220ENST00000585031 PET100P0DJ07 73 aa13.22□□□□□ -0.29
TOP3A-220ENST00000585031 RRASP10301 218 aa13.22□□□□□ -0.29
TOP3A-220ENST00000585031 MFAP2P55001 183 aa13.22□□□□□ -0.29
TOP3A-220ENST00000585031 KLK9Q2XQG4 91 aa13.22□□□□□ -0.29
TOP3A-220ENST00000585031 OR4A47Q6IF82 309 aa13.22□□□□□ -0.29
TOP3A-220ENST00000585031 VKORC1L1Q8N0U8 176 aa13.22□□□□□ -0.29
TOP3A-220ENST00000585031 OR11H4Q8NGC9 324 aa13.22□□□□□ -0.29
TOP3A-220ENST00000585031 THAP6Q8TBB0 222 aa13.22□□□□□ -0.29
TOP3A-220ENST00000585031 TMEM222Q9H0R3 208 aa13.22□□□□□ -0.29
TOP3A-220ENST00000585031 C11orf68Q9H3H3 251 aaKnown RBP13.22□□□□□ -0.29
TOP3A-220ENST00000585031 KLK9Q9UKQ9 250 aa13.22□□□□□ -0.29
TOP3A-220ENST00000585031 ADAP1O75689 374 aa13.21□□□□□ -0.29
TOP3A-220ENST00000585031 SLC25A4P12235 298 aa13.21□□□□□ -0.29
TOP3A-220ENST00000585031 MYOD1P15172 320 aa13.21□□□□□ -0.29
TOP3A-220ENST00000585031 ZNF575Q86XF7 245 aa13.21□□□□□ -0.29
TOP3A-220ENST00000585031 MMD2Q8IY49 270 aa13.21□□□□□ -0.29
TOP3A-220ENST00000585031 IL22RA2Q969J5 263 aa13.21□□□□□ -0.29
TOP3A-220ENST00000585031 MARC2Q969Z3 335 aa13.21□□□□□ -0.29
TOP3A-220ENST00000585031 SEC22AQ96IW7 307 aa13.21□□□□□ -0.29
TOP3A-220ENST00000585031 PRR13Q9NZ81 148 aa13.21□□□□□ -0.29
TOP3A-220ENST00000585031 L7N2F9 121 aa13.2□□□□□ -0.3
TOP3A-220ENST00000585031 PGLYRP1O75594 196 aaPredicted RBP13.2□□□□□ -0.3
TOP3A-220ENST00000585031 REG1AP05451 166 aa13.2□□□□□ -0.3
TOP3A-220ENST00000585031 CRYGCP07315 174 aa13.2□□□□□ -0.3
TOP3A-220ENST00000585031 PSMB6P28072 239 aa13.2□□□□□ -0.3
TOP3A-220ENST00000585031 SP6Q3SY56 376 aa13.2□□□□□ -0.3
TOP3A-220ENST00000585031 Q5BKY6 102 aa13.2□□□□□ -0.3
TOP3A-220ENST00000585031 GGNBP1Q5YKI7 109 aa13.2□□□□□ -0.3
TOP3A-220ENST00000585031 LAMTOR1Q6IAA8 161 aa13.2□□□□□ -0.3
TOP3A-220ENST00000585031 ZNF645Q8N7E2 425 aa13.2□□□□□ -0.3
TOP3A-220ENST00000585031 OR11H2Q8NH07 326 aa13.2□□□□□ -0.3
TOP3A-220ENST00000585031 OSR1Q8TAX0 266 aaPredicted RBP13.2□□□□□ -0.3
TOP3A-220ENST00000585031 PPP1R1CQ8WVI7 109 aa13.2□□□□□ -0.3
TOP3A-220ENST00000585031 EEF1AKMT3Q96AZ1 226 aa13.2□□□□□ -0.3
TOP3A-220ENST00000585031 TP53RKQ96S44 253 aa13.2□□□□□ -0.3
TOP3A-220ENST00000585031 CSTL1Q9H114 145 aa13.2□□□□□ -0.3
TOP3A-220ENST00000585031 PAIP2BQ9ULR5 123 aaKnown RBP13.2□□□□□ -0.3
TOP3A-220ENST00000585031 TMED3Q9Y3Q3 217 aa13.2□□□□□ -0.3
TOP3A-220ENST00000585031 CGB1A6NKQ9 187 aa13.19□□□□□ -0.3
TOP3A-220ENST00000585031 ACTL6BO94805 426 aa13.19□□□□□ -0.3
TOP3A-220ENST00000585031 RPA2P15927 270 aa13.19□□□□□ -0.3
TOP3A-220ENST00000585031 F2RP25116 425 aa13.19□□□□□ -0.3
TOP3A-220ENST00000585031 UCP1P25874 307 aa13.19□□□□□ -0.3
TOP3A-220ENST00000585031 CATR1Q13166 79 aa13.19□□□□□ -0.3
TOP3A-220ENST00000585031 IAH1Q2TAA2 248 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms