RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 SULT1A4P0DMN0 295 aa9.96□□□□□ -0.82
SREBF1-223ENST00000584760 SUB1P53999 127 aaKnown RBP eCLIP9.96□□□□□ -0.82
SREBF1-223ENST00000584760 HAGHQ16775 308 aa9.96□□□□□ -0.82
SREBF1-223ENST00000584760 TMED4Q7Z7H5 227 aa9.96□□□□□ -0.82
SREBF1-223ENST00000584760 DEFB125Q8N687 156 aa9.96□□□□□ -0.82
SREBF1-223ENST00000584760 FNDC4Q9H6D8 234 aaPredicted RBP9.96□□□□□ -0.82
SREBF1-223ENST00000584760 TUBA4BQ9H853 241 aa9.96□□□□□ -0.82
SREBF1-223ENST00000584760 MRPL36Q9P0J6 103 aaKnown RBP9.96□□□□□ -0.82
SREBF1-223ENST00000584760 SHPKQ9UHJ6 478 aa9.96□□□□□ -0.82
SREBF1-223ENST00000584760 RBMY1BA6NDE4 496 aaKnown RBP9.95□□□□□ -0.82
SREBF1-223ENST00000584760 RBMY1EA6NEQ0 496 aaKnown RBP9.95□□□□□ -0.82
SREBF1-223ENST00000584760 RBMY1DP0C7P1 496 aaKnown RBP9.95□□□□□ -0.82
SREBF1-223ENST00000584760 NPBWR1P48145 328 aa9.95□□□□□ -0.82
SREBF1-223ENST00000584760 SRPXP78539 464 aa9.95□□□□□ -0.82
SREBF1-223ENST00000584760 TMEM128Q5BJH2 165 aa9.95□□□□□ -0.82
SREBF1-223ENST00000584760 SLC16A13Q7RTY0 426 aa9.95□□□□□ -0.82
SREBF1-223ENST00000584760 LYZL2Q7Z4W2 148 aa9.95□□□□□ -0.82
SREBF1-223ENST00000584760 LGI3Q8N145 548 aa9.95□□□□□ -0.82
SREBF1-223ENST00000584760 DUSP18Q8NEJ0 188 aa9.95□□□□□ -0.82
SREBF1-223ENST00000584760 OR52B4Q8NGK2 314 aa9.95□□□□□ -0.82
SREBF1-223ENST00000584760 SPAG8Q99932 426 aaPredicted RBP9.95□□□□□ -0.82
SREBF1-223ENST00000584760 SLC25A21Q9BQT8 299 aaPredicted RBP9.95□□□□□ -0.82
SREBF1-223ENST00000584760 ZFAND3Q9H8U3 227 aa9.95□□□□□ -0.82
SREBF1-223ENST00000584760 TSPAN4O14817 238 aa9.94□□□□□ -0.82
SREBF1-223ENST00000584760 NXPH3O95157 252 aa9.94□□□□□ -0.82
SREBF1-223ENST00000584760 ANXA3P12429 323 aa9.94□□□□□ -0.82
SREBF1-223ENST00000584760 OPRK1P41145 380 aa9.94□□□□□ -0.82
SREBF1-223ENST00000584760 HTR2BP41595 481 aa9.94□□□□□ -0.82
SREBF1-223ENST00000584760 SMCO1Q147U7 214 aa9.94□□□□□ -0.82
SREBF1-223ENST00000584760 BAK1Q16611 211 aa9.94□□□□□ -0.82
SREBF1-223ENST00000584760 ANKRD55Q3KP44 614 aa9.94□□□□□ -0.82
SREBF1-223ENST00000584760 RBPMS2Q6ZRY4 209 aaKnown RBP9.94□□□□□ -0.82
SREBF1-223ENST00000584760 SLC24A4Q8NFF2 622 aa9.94□□□□□ -0.82
SREBF1-223ENST00000584760 TMEM170AQ8WVE7 144 aa9.94□□□□□ -0.82
SREBF1-223ENST00000584760 SDHCQ99643 169 aaPredicted RBP9.94□□□□□ -0.82
SREBF1-223ENST00000584760 SPATA25Q9BR10 227 aa9.94□□□□□ -0.82
SREBF1-223ENST00000584760 SRD5A3Q9H8P0 318 aa9.94□□□□□ -0.82
SREBF1-223ENST00000584760 EDA2RQ9HAV5 297 aa9.94□□□□□ -0.82
SREBF1-223ENST00000584760 HEYLQ9NQ87 328 aaPredicted RBP9.94□□□□□ -0.82
SREBF1-223ENST00000584760 HSPB7Q9UBY9 170 aa9.94□□□□□ -0.82
SREBF1-223ENST00000584760 CACFD1Q9UGQ2 172 aa9.94□□□□□ -0.82
SREBF1-223ENST00000584760 SMPXQ9UHP9 88 aa9.94□□□□□ -0.82
SREBF1-223ENST00000584760 IGHV7-4-1A0A0J9YVY3 117 aa9.93□□□□□ -0.82
SREBF1-223ENST00000584760 DUXBA0A1W2PPF3 345 aa9.93□□□□□ -0.82
SREBF1-223ENST00000584760 CEBPZOSA8MTT3 80 aa9.93□□□□□ -0.82
SREBF1-223ENST00000584760 YIF1AO95070 293 aa9.93□□□□□ -0.82
SREBF1-223ENST00000584760 CCR6P51684 374 aa9.93□□□□□ -0.82
SREBF1-223ENST00000584760 TNFRSF9Q07011 255 aa9.93□□□□□ -0.82
SREBF1-223ENST00000584760 RBMS2Q15434 407 aaKnown RBP9.93□□□□□ -0.82
SREBF1-223ENST00000584760 C2orf83Q53S99 150 aa9.93□□□□□ -0.82
SREBF1-223ENST00000584760 TOMM20LQ6UXN7 152 aa9.93□□□□□ -0.82
SREBF1-223ENST00000584760 ZNF600Q6ZNG1 722 aa9.93□□□□□ -0.82
SREBF1-223ENST00000584760 LRTM2Q8N967 370 aa9.93□□□□□ -0.82
SREBF1-223ENST00000584760 OR4X1Q8NH49 305 aa9.93□□□□□ -0.82
SREBF1-223ENST00000584760 IGHV3-49A0A0A0MS15 119 aa9.92□□□□□ -0.82
SREBF1-223ENST00000584760 PIGBOS1A0A0B4J2F0 54 aa9.92□□□□□ -0.82
SREBF1-223ENST00000584760 A0A1B0GU03 582 aa9.92□□□□□ -0.82
SREBF1-223ENST00000584760 CHEK1O14757 476 aa9.92□□□□□ -0.82
SREBF1-223ENST00000584760 CLN5O75503 358 aa9.92□□□□□ -0.82
SREBF1-223ENST00000584760 TMEM50AO95807 157 aa9.92□□□□□ -0.82
SREBF1-223ENST00000584760 VAMP1P23763 118 aa9.92□□□□□ -0.82
SREBF1-223ENST00000584760 NPY1RP25929 384 aa9.92□□□□□ -0.82
SREBF1-223ENST00000584760 PPP1R1AQ13522 171 aa9.92□□□□□ -0.82
SREBF1-223ENST00000584760 MLANAQ16655 118 aa9.92□□□□□ -0.82
SREBF1-223ENST00000584760 TRIQKQ629K1 86 aa9.92□□□□□ -0.82
SREBF1-223ENST00000584760 LAMTOR1Q6IAA8 161 aa9.92□□□□□ -0.82
SREBF1-223ENST00000584760 TMEM116Q8NCL8 245 aa9.92□□□□□ -0.82
SREBF1-223ENST00000584760 RNASEH2CQ8TDP1 164 aaKnown RBP9.92□□□□□ -0.82
SREBF1-223ENST00000584760 RNF2Q99496 336 aa9.92□□□□□ -0.82
SREBF1-223ENST00000584760 RHPN1-AS1Q9BWJ2 59 aa9.92□□□□□ -0.82
SREBF1-223ENST00000584760 HIPK2Q9H2X6 1198 aa9.92□□□□□ -0.82
SREBF1-223ENST00000584760 NDUFA13Q9P0J0 144 aa9.92□□□□□ -0.82
SREBF1-223ENST00000584760 PUS1Q9Y606 427 aaKnown RBP eCLIP9.92□□□□□ -0.82
SREBF1-223ENST00000584760 DNAH1Q9P2D7 4330 aa9.91□□□□□ -0.82
SREBF1-223ENST00000584760 TRAV14DV4A0A0A6YYC5 116 aa9.91□□□□□ -0.82
SREBF1-223ENST00000584760 RPS10-NUDT3A0A1W2PQS6 291 aa9.91□□□□□ -0.82
SREBF1-223ENST00000584760 PITX3O75364 302 aa9.91□□□□□ -0.82
SREBF1-223ENST00000584760 SFT2D2O95562 160 aa9.91□□□□□ -0.82
SREBF1-223ENST00000584760 IGKV1-17P01599 117 aa9.91□□□□□ -0.82
SREBF1-223ENST00000584760 BTCP35070 178 aa9.91□□□□□ -0.82
SREBF1-223ENST00000584760 ODF3L2Q3SX64 289 aa9.91□□□□□ -0.82
SREBF1-223ENST00000584760 PRSS54Q6PEW0 395 aa9.91□□□□□ -0.82
SREBF1-223ENST00000584760 CENPSQ8N2Z9 138 aa9.91□□□□□ -0.82
SREBF1-223ENST00000584760 GINS3Q9BRX5 216 aa9.91□□□□□ -0.82
SREBF1-223ENST00000584760 RETNQ9HD89 108 aa9.91□□□□□ -0.82
SREBF1-223ENST00000584760 NAP1L6A6NFF2 107 aa9.9□□□□□ -0.82
SREBF1-223ENST00000584760 JTBO76095 146 aa9.9□□□□□ -0.82
SREBF1-223ENST00000584760 NDUFB6O95139 128 aa9.9□□□□□ -0.82
SREBF1-223ENST00000584760 SLC25A4P12235 298 aa9.9□□□□□ -0.82
SREBF1-223ENST00000584760 IL7P13232 177 aa9.9□□□□□ -0.82
SREBF1-223ENST00000584760 INPP1P49441 399 aa9.9□□□□□ -0.82
SREBF1-223ENST00000584760 UBE2MP61081 183 aaKnown RBP9.9□□□□□ -0.82
SREBF1-223ENST00000584760 FAM90A2PQ658T7 463 aa9.9□□□□□ -0.82
SREBF1-223ENST00000584760 DTD1Q8TEA8 209 aa9.9□□□□□ -0.82
SREBF1-223ENST00000584760 RBKSQ9H477 322 aa9.9□□□□□ -0.82
SREBF1-223ENST00000584760 VSIRQ9H7M9 311 aa9.9□□□□□ -0.82
SREBF1-223ENST00000584760 IGHV3OR16-13A0A075B7E8 117 aa9.89□□□□□ -0.83
SREBF1-223ENST00000584760 IGHV3-74A0A0B4J1X5 117 aa9.89□□□□□ -0.83
SREBF1-223ENST00000584760 OR4C46A6NHA9 309 aa9.89□□□□□ -0.83
SREBF1-223ENST00000584760 APOHP02749 345 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms