RNA–Protein interactions for RNA: ENST00000584527.1

SPECC1-223, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, human

TSL 3 BASIC

Gene SPECC1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPECC1-223	ENST00000584527		Q8N1Y9	231 aa		11.52	□□□□□ -0.57
SPECC1-223	ENST00000584527	C12orf45	Q8N5I9	185 aa	Predicted RBP	11.52	□□□□□ -0.57
SPECC1-223	ENST00000584527	SCARB1	Q8WTV0	552 aa		11.52	□□□□□ -0.57
SPECC1-223	ENST00000584527	TXN2	Q99757	166 aa		11.52	□□□□□ -0.57
SPECC1-223	ENST00000584527	MARVELD1	Q9BSK0	173 aa		11.52	□□□□□ -0.57
SPECC1-223	ENST00000584527	GPN1	Q9HCN4	374 aa	Predicted RBP	11.52	□□□□□ -0.57
SPECC1-223	ENST00000584527	PALMD	Q9NP74	551 aa		11.52	□□□□□ -0.57
SPECC1-223	ENST00000584527	C21orf62	Q9NYP8	219 aa		11.52	□□□□□ -0.57
SPECC1-223	ENST00000584527		S4R3C0	116 aa		11.52	□□□□□ -0.57
SPECC1-223	ENST00000584527		U3KQ87	197 aa		11.52	□□□□□ -0.57
SPECC1-223	ENST00000584527	PPP5D1	E7EU14	171 aa		11.51	□□□□□ -0.57
SPECC1-223	ENST00000584527	INMT-MINDY4	F8WBC2	141 aa		11.51	□□□□□ -0.57
SPECC1-223	ENST00000584527	NXPH3	O95157	252 aa		11.51	□□□□□ -0.57
SPECC1-223	ENST00000584527	MT-CO2	P00403	227 aa		11.51	□□□□□ -0.57
SPECC1-223	ENST00000584527	IGHV4-30-4	P0DP06	118 aa		11.51	□□□□□ -0.57
SPECC1-223	ENST00000584527	MFAP4	P55083	255 aa		11.51	□□□□□ -0.57
SPECC1-223	ENST00000584527	SPSB3	Q6PJ21	355 aa		11.51	□□□□□ -0.57
SPECC1-223	ENST00000584527	SLC24A4	Q8NFF2	622 aa		11.51	□□□□□ -0.57
SPECC1-223	ENST00000584527	BSCL2	Q96G97	398 aa	Predicted RBP	11.51	□□□□□ -0.57
SPECC1-223	ENST00000584527	CIB3	Q96Q77	187 aa	Predicted RBP	11.51	□□□□□ -0.57
SPECC1-223	ENST00000584527	LYST	Q99698	3801 aa		11.51	□□□□□ -0.57
SPECC1-223	ENST00000584527	EDA2R	Q9HAV5	297 aa		11.51	□□□□□ -0.57
SPECC1-223	ENST00000584527	CSMD3	Q7Z407	3707 aa		11.51	□□□□□ -0.57
SPECC1-223	ENST00000584527	SNRPGP15	A8MWD9	76 aa		11.5	□□□□□ -0.57
SPECC1-223	ENST00000584527	NPY1R	P25929	384 aa		11.5	□□□□□ -0.57
SPECC1-223	ENST00000584527	FCGR2B	P31994	310 aa	Predicted RBP	11.5	□□□□□ -0.57
SPECC1-223	ENST00000584527	SYNJ2BP	P57105	145 aa		11.5	□□□□□ -0.57
SPECC1-223	ENST00000584527	GPHB5	Q86YW7	130 aa		11.5	□□□□□ -0.57
SPECC1-223	ENST00000584527	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.5	□□□□□ -0.57
SPECC1-223	ENST00000584527	PINX1	Q96BK5	328 aa	Known RBP	11.5	□□□□□ -0.57
SPECC1-223	ENST00000584527	SACS	Q9NZJ4	4579 aa		11.5	□□□□□ -0.57
SPECC1-223	ENST00000584527	IGHV3-21	A0A0B4J1V1	117 aa		11.49	□□□□□ -0.57
SPECC1-223	ENST00000584527	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.49	□□□□□ -0.57
SPECC1-223	ENST00000584527	LGALS9	O00182	355 aa		11.49	□□□□□ -0.57
SPECC1-223	ENST00000584527	TGOLN2	O43493	480 aa		11.49	□□□□□ -0.57
SPECC1-223	ENST00000584527	SYNGR2	O43760	224 aa		11.49	□□□□□ -0.57
SPECC1-223	ENST00000584527	PTTG1	O95997	202 aa		11.49	□□□□□ -0.57
SPECC1-223	ENST00000584527	IFNA10	P01566	189 aa		11.49	□□□□□ -0.57
SPECC1-223	ENST00000584527	GPR183	P32249	361 aa		11.49	□□□□□ -0.57
SPECC1-223	ENST00000584527	ID3	Q02535	119 aa		11.49	□□□□□ -0.57
SPECC1-223	ENST00000584527	IAH1	Q2TAA2	248 aa	Predicted RBP	11.49	□□□□□ -0.57
SPECC1-223	ENST00000584527	FAM106A	Q4KMX7	169 aa		11.49	□□□□□ -0.57
SPECC1-223	ENST00000584527		Q56UQ5	140 aa		11.49	□□□□□ -0.57
SPECC1-223	ENST00000584527	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	11.49	□□□□□ -0.57
SPECC1-223	ENST00000584527	UXS1	Q8NBZ7	420 aa		11.49	□□□□□ -0.57
SPECC1-223	ENST00000584527	OR4D5	Q8NGN0	318 aa		11.49	□□□□□ -0.57
SPECC1-223	ENST00000584527	OR9G4	Q8NGQ1	327 aa		11.49	□□□□□ -0.57
SPECC1-223	ENST00000584527	SIGLEC8	Q9NYZ4	499 aa		11.49	□□□□□ -0.57
SPECC1-223	ENST00000584527	PEMT	Q9UBM1	199 aa		11.49	□□□□□ -0.57
SPECC1-223	ENST00000584527	OR2T8	A6NH00	312 aa		11.48	□□□□□ -0.57
SPECC1-223	ENST00000584527	MPTX1	A8MV57	137 aa		11.48	□□□□□ -0.57
SPECC1-223	ENST00000584527	OR2C1	O95371	312 aa		11.48	□□□□□ -0.57
SPECC1-223	ENST00000584527	NKX2-1	P43699	371 aa	Predicted RBP	11.48	□□□□□ -0.57
SPECC1-223	ENST00000584527	NPBWR1	P48145	328 aa		11.48	□□□□□ -0.57
SPECC1-223	ENST00000584527	RPP30	P78346	268 aa	Known RBP	11.48	□□□□□ -0.57
SPECC1-223	ENST00000584527	OR10C1	Q96KK4	312 aa		11.48	□□□□□ -0.57
SPECC1-223	ENST00000584527	STARD9	Q9P2P6	4700 aa		11.48	□□□□□ -0.57
SPECC1-223	ENST00000584527		F8W735	103 aa	Predicted RBP	11.47	□□□□□ -0.57
SPECC1-223	ENST00000584527	NUPL2	O15504	423 aa	Known RBP	11.47	□□□□□ -0.57
SPECC1-223	ENST00000584527	SLC25A4	P12235	298 aa		11.47	□□□□□ -0.57
SPECC1-223	ENST00000584527	OPRK1	P41145	380 aa		11.47	□□□□□ -0.57
SPECC1-223	ENST00000584527	ETFRF1	Q6IPR1	90 aa		11.47	□□□□□ -0.57
SPECC1-223	ENST00000584527	HAPLN4	Q86UW8	402 aa		11.47	□□□□□ -0.57
SPECC1-223	ENST00000584527	UBAC2	Q8NBM4	344 aa		11.47	□□□□□ -0.57
SPECC1-223	ENST00000584527	TMEM170A	Q8WVE7	144 aa		11.47	□□□□□ -0.57
SPECC1-223	ENST00000584527	SPATA25	Q9BR10	227 aa		11.47	□□□□□ -0.57
SPECC1-223	ENST00000584527	ZNF436	Q9C0F3	470 aa	Predicted RBP	11.47	□□□□□ -0.57
SPECC1-223	ENST00000584527	MAGT1	Q9H0U3	335 aa		11.47	□□□□□ -0.57
SPECC1-223	ENST00000584527	C5orf51	A6NDU8	294 aa		11.46	□□□□□ -0.57
SPECC1-223	ENST00000584527	WRB	O00258	174 aa		11.46	□□□□□ -0.57
SPECC1-223	ENST00000584527	GNG7	O60262	68 aa		11.46	□□□□□ -0.57
SPECC1-223	ENST00000584527	SCGB2A1	O75556	95 aa		11.46	□□□□□ -0.57
SPECC1-223	ENST00000584527	CTSG	P08311	255 aa		11.46	□□□□□ -0.57
SPECC1-223	ENST00000584527	IAPP	P10997	89 aa		11.46	□□□□□ -0.57
SPECC1-223	ENST00000584527	RAB11A	P62491	216 aa		11.46	□□□□□ -0.57
SPECC1-223	ENST00000584527	REL	Q04864	619 aa	Predicted RBP	11.46	□□□□□ -0.57
SPECC1-223	ENST00000584527	IL34	Q6ZMJ4	242 aa		11.46	□□□□□ -0.57
SPECC1-223	ENST00000584527	OR4X1	Q8NH49	305 aa		11.46	□□□□□ -0.57
SPECC1-223	ENST00000584527	C2orf50	Q96LR7	162 aa		11.46	□□□□□ -0.57
SPECC1-223	ENST00000584527	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.46	□□□□□ -0.57
SPECC1-223	ENST00000584527	GSKIP	Q9P0R6	139 aa		11.46	□□□□□ -0.57
SPECC1-223	ENST00000584527	FAM25E	A8MYX2	175 aa		11.45	□□□□□ -0.58
SPECC1-223	ENST00000584527	NDUFA4	O00483	81 aa		11.45	□□□□□ -0.58
SPECC1-223	ENST00000584527	CCS	O14618	274 aa		11.45	□□□□□ -0.58
SPECC1-223	ENST00000584527	IGHV3-48	P01763	117 aa		11.45	□□□□□ -0.58
SPECC1-223	ENST00000584527	IFNA4	P05014	189 aa		11.45	□□□□□ -0.58
SPECC1-223	ENST00000584527	GPX4	P36969	197 aa	Predicted RBP	11.45	□□□□□ -0.58
SPECC1-223	ENST00000584527	POLR2G	P62487	172 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
SPECC1-223	ENST00000584527	GSG1L	Q6UXU4	331 aa		11.45	□□□□□ -0.58
SPECC1-223	ENST00000584527	CHRDL1	Q9BU40	450 aa		11.45	□□□□□ -0.58
SPECC1-223	ENST00000584527	ZC4H2	Q9NQZ6	224 aa		11.45	□□□□□ -0.58
SPECC1-223	ENST00000584527	TRAV30	A0A087WSZ9	112 aa		11.44	□□□□□ -0.58
SPECC1-223	ENST00000584527	ZNF320	A2RRD8	509 aa		11.44	□□□□□ -0.58
SPECC1-223	ENST00000584527	C15orf62	A8K5M9	175 aa		11.44	□□□□□ -0.58
SPECC1-223	ENST00000584527		A8MWP6	167 aa		11.44	□□□□□ -0.58
SPECC1-223	ENST00000584527	CLN5	O75503	358 aa		11.44	□□□□□ -0.58
SPECC1-223	ENST00000584527	TMEM50A	O95807	157 aa		11.44	□□□□□ -0.58
SPECC1-223	ENST00000584527	CSN3	P07498	182 aa		11.44	□□□□□ -0.58
SPECC1-223	ENST00000584527	ADM	P35318	185 aa		11.44	□□□□□ -0.58
SPECC1-223	ENST00000584527	ELL	P55199	621 aa	Predicted RBP	11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms