RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 TRAPPC2BP0DI82 140 aa5.7□□□□□ -1.5
SMCHD1-210ENST00000583800 MSMO1Q15800 293 aa5.7□□□□□ -1.5
SMCHD1-210ENST00000583800 Q56UQ5 140 aa5.7□□□□□ -1.5
SMCHD1-210ENST00000583800 AADACL3Q5VUY0 350 aa5.7□□□□□ -1.5
SMCHD1-210ENST00000583800 SPSB3Q6PJ21 355 aa5.7□□□□□ -1.5
SMCHD1-210ENST00000583800 ZNF818PQ6ZRF7 136 aa5.7□□□□□ -1.5
SMCHD1-210ENST00000583800 TMEM17Q86X19 198 aa5.7□□□□□ -1.5
SMCHD1-210ENST00000583800 OR11H2Q8NH07 326 aa5.7□□□□□ -1.5
SMCHD1-210ENST00000583800 GATAD1Q8WUU5 269 aa5.7□□□□□ -1.5
SMCHD1-210ENST00000583800 AIFM2Q9BRQ8 373 aa5.7□□□□□ -1.5
SMCHD1-210ENST00000583800 HINT2Q9BX68 163 aa5.7□□□□□ -1.5
SMCHD1-210ENST00000583800 C6orf62Q9GZU0 229 aaPredicted RBP5.7□□□□□ -1.5
SMCHD1-210ENST00000583800 CSTL1Q9H114 145 aa5.7□□□□□ -1.5
SMCHD1-210ENST00000583800 C11orf68Q9H3H3 251 aaKnown RBP5.7□□□□□ -1.5
SMCHD1-210ENST00000583800 RHBDL2Q9NX52 303 aa5.7□□□□□ -1.5
SMCHD1-210ENST00000583800 NSG2Q9Y328 171 aa5.7□□□□□ -1.5
SMCHD1-210ENST00000583800 F11RQ9Y624 299 aaKnown RBP5.7□□□□□ -1.5
SMCHD1-210ENST00000583800 DNAH17Q9UFH2 4485 aa5.7□□□□□ -1.5
SMCHD1-210ENST00000583800 IGHV3OR16-13A0A075B7E8 117 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 IGHV3-74A0A0B4J1X5 117 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 IGHV7-4-1A0A0J9YVY3 117 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 C15orf62A8K5M9 175 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 K7EMT4 169 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 CHEK1O14757 476 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 CYB5BO43169 146 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 ST8SIA3O43173 380 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 SCGNO76038 276 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 CA1P00915 261 aaPredicted RBP5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 RLN1P04808 185 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 IFNA4P05014 189 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 GAMTQ14353 236 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 THOC7Q6I9Y2 204 aaKnown RBP5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 SFXN4Q6P4A7 337 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 TMEM182Q6ZP80 229 aaPredicted RBP5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 Q6ZSN1 163 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 HSD17B13Q7Z5P4 300 aaPredicted RBP5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 HOGA1Q86XE5 327 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 GBGT1Q8N5D6 347 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 SYT8Q8NBV8 401 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 OR1L8Q8NGR8 309 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 OR5H6Q8NGV6 325 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 LSM10Q969L4 123 aaKnown RBP5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 CNBD2Q96M20 576 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 RHPN1-AS1Q9BWJ2 59 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 MFFQ9GZY8 342 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 NDUFA4L2Q9NRX3 87 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 TXNL4BQ9NX01 149 aaKnown RBP5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 COMMD9Q9P000 198 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 SMPXQ9UHP9 88 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 ETV7Q9Y603 341 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 DNAH11Q96DT5 4516 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 MUC4Q99102 2169 aa5.69□□□□□ -1.5
SMCHD1-210ENST00000583800 TRAV18A0A075B6X5 111 aa5.68□□□□□ -1.5
SMCHD1-210ENST00000583800 MEIS3P1A6NDR6 274 aa5.68□□□□□ -1.5
SMCHD1-210ENST00000583800 H0YIZ8 118 aa5.68□□□□□ -1.5
SMCHD1-210ENST00000583800 YIF1AO95070 293 aa5.68□□□□□ -1.5
SMCHD1-210ENST00000583800 CTSGP08311 255 aa5.68□□□□□ -1.5
SMCHD1-210ENST00000583800 FGF2P09038 288 aa5.68□□□□□ -1.5
SMCHD1-210ENST00000583800 VPREB1P12018 145 aa5.68□□□□□ -1.5
SMCHD1-210ENST00000583800 ERVK-16P61578 105 aa5.68□□□□□ -1.5
SMCHD1-210ENST00000583800 SLC25A38Q96DW6 304 aa5.68□□□□□ -1.5
SMCHD1-210ENST00000583800 APLNQ9ULZ1 77 aa5.68□□□□□ -1.5
SMCHD1-210ENST00000583800 OR51B2Q9Y5P1 312 aa5.68□□□□□ -1.5
SMCHD1-210ENST00000583800 PKHD1P08F94 4074 aa5.68□□□□□ -1.5
SMCHD1-210ENST00000583800 IGLL5B9A064 214 aa5.67□□□□□ -1.5
SMCHD1-210ENST00000583800 NUPL2O15504 423 aaKnown RBP5.67□□□□□ -1.5
SMCHD1-210ENST00000583800 IGHV3-48P01763 117 aa5.67□□□□□ -1.5
SMCHD1-210ENST00000583800 PSMB9P28065 219 aa5.67□□□□□ -1.5
SMCHD1-210ENST00000583800 GNRHRP30968 328 aa5.67□□□□□ -1.5
SMCHD1-210ENST00000583800 FGF9P31371 208 aaPredicted RBP5.67□□□□□ -1.5
SMCHD1-210ENST00000583800 G6PCP35575 357 aa5.67□□□□□ -1.5
SMCHD1-210ENST00000583800 HERV-K104P61576 105 aa5.67□□□□□ -1.5
SMCHD1-210ENST00000583800 RELQ04864 619 aaPredicted RBP5.67□□□□□ -1.5
SMCHD1-210ENST00000583800 MXD1Q05195 221 aa5.67□□□□□ -1.5
SMCHD1-210ENST00000583800 TMEM187Q14656 261 aa5.67□□□□□ -1.5
SMCHD1-210ENST00000583800 LEMD1Q68G75 181 aa5.67□□□□□ -1.5
SMCHD1-210ENST00000583800 TPRA1Q86W33 373 aa5.67□□□□□ -1.5
SMCHD1-210ENST00000583800 FAM219AQ8IW50 185 aa5.67□□□□□ -1.5
SMCHD1-210ENST00000583800 FAM24BQ8N5W8 94 aa5.67□□□□□ -1.5
SMCHD1-210ENST00000583800 OR5AP2Q8NGF4 316 aa5.67□□□□□ -1.5
SMCHD1-210ENST00000583800 GIMAP1Q8WWP7 306 aa5.67□□□□□ -1.5
SMCHD1-210ENST00000583800 FCAMRQ8WWV6 532 aa5.67□□□□□ -1.5
SMCHD1-210ENST00000583800 SLC25A46Q96AG3 418 aa5.67□□□□□ -1.5
SMCHD1-210ENST00000583800 OR10C1Q96KK4 312 aa5.67□□□□□ -1.5
SMCHD1-210ENST00000583800 RNF167Q9H6Y7 350 aa5.67□□□□□ -1.5
SMCHD1-210ENST00000583800 STRAPQ9Y3F4 350 aaKnown RBP5.67□□□□□ -1.5
SMCHD1-210ENST00000583800 TRAV14DV4A0A0A6YYC5 116 aa5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 IGHV3-66A0A0C4DH42 116 aa5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 KRTAP23-1A1A580 65 aa5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 I3L2K1 104 aa5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 XRCC3O43542 346 aa5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 MRPS14O60783 128 aaKnown RBP5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 PGLYRP1O75594 196 aaPredicted RBP5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 SNAPC5O75971 98 aa5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 KRASP01116 189 aa5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 APOHP02749 345 aaPredicted RBP5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 F2RP25116 425 aa5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 SDC2P34741 201 aa5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 LPAR6P43657 344 aa5.66□□□□□ -1.5
SMCHD1-210ENST00000583800 CMC4P56277 68 aaPredicted RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms