RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 PRR20CP86479 221 aa7.73□□□□□ -1.17
SKA2-207ENST00000583380 PRR20DP86480 221 aa7.73□□□□□ -1.17
SKA2-207ENST00000583380 PRR20BP86481 221 aa7.73□□□□□ -1.17
SKA2-207ENST00000583380 PRR20AP86496 221 aa7.73□□□□□ -1.17
SKA2-207ENST00000583380 PLP2Q04941 152 aa7.73□□□□□ -1.17
SKA2-207ENST00000583380 FAM106AQ4KMX7 169 aa7.73□□□□□ -1.17
SKA2-207ENST00000583380 CFAP126Q5VTH2 177 aa7.73□□□□□ -1.17
SKA2-207ENST00000583380 CXCL17Q6UXB2 119 aa7.73□□□□□ -1.17
SKA2-207ENST00000583380 PDPNQ86YL7 162 aa7.73□□□□□ -1.17
SKA2-207ENST00000583380 ZDHHC23Q8IYP9 409 aa7.73□□□□□ -1.17
SKA2-207ENST00000583380 OR1L4Q8NGR5 311 aa7.73□□□□□ -1.17
SKA2-207ENST00000583380 SNRNP40Q96DI7 357 aaKnown RBP7.73□□□□□ -1.17
SKA2-207ENST00000583380 LINC01600Q96MT4 127 aa7.73□□□□□ -1.17
SKA2-207ENST00000583380 CHAC1Q9BUX1 264 aa7.73□□□□□ -1.17
SKA2-207ENST00000583380 C1QTNF5Q9BXJ0 243 aa7.73□□□□□ -1.17
SKA2-207ENST00000583380 NGBQ9NPG2 151 aa7.73□□□□□ -1.17
SKA2-207ENST00000583380 KLF12Q9Y4X4 402 aa7.73□□□□□ -1.17
SKA2-207ENST00000583380 SHANK1Q9Y566 2161 aa7.73□□□□□ -1.17
SKA2-207ENST00000583380 TRAV5A0A0B4J249 113 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 IGKV1-12A0A0C4DH73 117 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 TRBV6-1A0A0K0K1D8 114 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 C15orf65H3BRN8 121 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 SPINK4O60575 86 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 IGKV1D-12P01611 117 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 P01737 135 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 MT-ATP8P03928 68 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 CST6Q15828 149 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 KLF17Q5JT82 389 aaPredicted RBP7.72□□□□□ -1.17
SKA2-207ENST00000583380 SBSPONQ8IVN8 264 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 STPG3Q8N7X2 389 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 IL1F10Q8WWZ1 152 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 TMEM158Q8WZ71 300 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 PIGCQ92535 297 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 FMC1Q96HJ9 113 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 URB1-AS1Q96HZ7 61 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 CYYR1Q96J86 154 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 LINC00479Q96M42 142 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 MGST2Q99735 147 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 PRSS22Q9GZN4 317 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 PRDM14Q9GZV8 571 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 ENY2Q9NPA8 101 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 HCFC1R1Q9NWW0 138 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 OCIAD1Q9NX40 245 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 MDFICQ9P1T7 246 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 AMMECR1Q9Y4X0 333 aaPredicted RBP7.72□□□□□ -1.17
SKA2-207ENST00000583380 HILPDAQ9Y5L2 63 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 LRRK1Q38SD2 2015 aa7.72□□□□□ -1.17
SKA2-207ENST00000583380 TNRC6AQ8NDV7 1962 aaKnown RBP7.71□□□□□ -1.17
SKA2-207ENST00000583380 IGKV1-6A0A0C4DH72 117 aa7.71□□□□□ -1.18
SKA2-207ENST00000583380 MANSC4A6NHS7 340 aaPredicted RBP7.71□□□□□ -1.18
SKA2-207ENST00000583380 NPIPB6E9PJ23 425 aa7.71□□□□□ -1.18
SKA2-207ENST00000583380 MGST3O14880 152 aa7.71□□□□□ -1.18
SKA2-207ENST00000583380 CAMPP49913 170 aa7.71□□□□□ -1.18
SKA2-207ENST00000583380 FOXG1P55316 489 aaPredicted RBP7.71□□□□□ -1.18
SKA2-207ENST00000583380 XGP55808 180 aa7.71□□□□□ -1.18
SKA2-207ENST00000583380 FXYD3Q14802 87 aa7.71□□□□□ -1.18
SKA2-207ENST00000583380 OR1C1Q15619 314 aa7.71□□□□□ -1.18
SKA2-207ENST00000583380 TWIST1Q15672 202 aa7.71□□□□□ -1.18
SKA2-207ENST00000583380 ZNF77Q15935 545 aa7.71□□□□□ -1.18
SKA2-207ENST00000583380 NNATQ16517 81 aa7.71□□□□□ -1.18
SKA2-207ENST00000583380 C12orf74Q32Q52 190 aa7.71□□□□□ -1.18
SKA2-207ENST00000583380 DTX1Q86Y01 620 aa7.71□□□□□ -1.18
SKA2-207ENST00000583380 DRAM1Q8N682 238 aa7.71□□□□□ -1.18
SKA2-207ENST00000583380 KIR3DL3Q8N743 410 aa7.71□□□□□ -1.18
SKA2-207ENST00000583380 RBMXL3Q8N7X1 1067 aaKnown RBP7.71□□□□□ -1.18
SKA2-207ENST00000583380 TMEM178AQ8NBL3 297 aa7.71□□□□□ -1.18
SKA2-207ENST00000583380 IFI27L1Q96BM0 104 aa7.71□□□□□ -1.18
SKA2-207ENST00000583380 RTL8AQ9BWD3 113 aa7.71□□□□□ -1.18
SKA2-207ENST00000583380 CFHR5Q9BXR6 569 aa7.71□□□□□ -1.18
SKA2-207ENST00000583380 KRTAP3-3Q9BYR6 98 aa7.71□□□□□ -1.18
SKA2-207ENST00000583380 KRTAP3-2Q9BYR7 98 aa7.71□□□□□ -1.18
SKA2-207ENST00000583380 ZNF355PQ9NSJ1 428 aa7.71□□□□□ -1.18
SKA2-207ENST00000583380 DEC1Q9P2X7 70 aa7.71□□□□□ -1.18
SKA2-207ENST00000583380 B4GALT7Q9UBV7 327 aa7.71□□□□□ -1.18
SKA2-207ENST00000583380 CSDC2Q9Y534 153 aaKnown RBP7.71□□□□□ -1.18
SKA2-207ENST00000583380 INSIG2Q9Y5U4 225 aa7.71□□□□□ -1.18
SKA2-207ENST00000583380 MPC1Q9Y5U8 109 aa7.71□□□□□ -1.18
SKA2-207ENST00000583380 POLR2AP24928 1970 aaKnown RBP7.71□□□□□ -1.18
SKA2-207ENST00000583380 IGKV1-27A0A075B6S5 117 aa7.7□□□□□ -1.18
SKA2-207ENST00000583380 PRSS38A1L453 326 aa7.7□□□□□ -1.18
SKA2-207ENST00000583380 PRSS29PA6NIE9 313 aa7.7□□□□□ -1.18
SKA2-207ENST00000583380 PEX7O00628 323 aa7.7□□□□□ -1.18
SKA2-207ENST00000583380 HOXA3O43365 443 aaPredicted RBP7.7□□□□□ -1.18
SKA2-207ENST00000583380 ZG16O60844 167 aa7.7□□□□□ -1.18
SKA2-207ENST00000583380 BRI3O95415 125 aa7.7□□□□□ -1.18
SKA2-207ENST00000583380 POM121L1PQ3SYA9 428 aa7.7□□□□□ -1.18
SKA2-207ENST00000583380 RPS19BP1Q86WX3 136 aaKnown RBP7.7□□□□□ -1.18
SKA2-207ENST00000583380 C1orf210Q8IVY1 113 aa7.7□□□□□ -1.18
SKA2-207ENST00000583380 NFAM1Q8NET5 270 aaPredicted RBP7.7□□□□□ -1.18
SKA2-207ENST00000583380 OR11H6Q8NGC7 330 aa7.7□□□□□ -1.18
SKA2-207ENST00000583380 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.7□□□□□ -1.18
SKA2-207ENST00000583380 RITA1Q96K30 269 aa7.7□□□□□ -1.18
SKA2-207ENST00000583380 C20orf78Q9BR46 151 aa7.7□□□□□ -1.18
SKA2-207ENST00000583380 ZMAT4Q9H898 229 aa7.7□□□□□ -1.18
SKA2-207ENST00000583380 MBNL3Q9NUK0 354 aaKnown RBP7.7□□□□□ -1.18
SKA2-207ENST00000583380 NHP2Q9NX24 153 aaKnown RBP7.7□□□□□ -1.18
SKA2-207ENST00000583380 ONECUT1Q9UBC0 465 aa7.7□□□□□ -1.18
SKA2-207ENST00000583380 A0A1B0GUT8 65 aa7.69□□□□□ -1.18
SKA2-207ENST00000583380 OOEPA6NGQ2 149 aa7.69□□□□□ -1.18
SKA2-207ENST00000583380 NPIPB5A8MRT5 1133 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms