RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 IGKV1-39P01597 117 aa9.03□□□□□ -0.96
TOP3A-215ENST00000583328 IGKV1D-39P04432 117 aa9.03□□□□□ -0.96
TOP3A-215ENST00000583328 FGF2P09038 288 aa9.03□□□□□ -0.96
TOP3A-215ENST00000583328 ANXA3P12429 323 aa9.03□□□□□ -0.96
TOP3A-215ENST00000583328 MFAP2P55001 183 aa9.03□□□□□ -0.96
TOP3A-215ENST00000583328 DEFA1P59665 94 aa9.03□□□□□ -0.96
TOP3A-215ENST00000583328 DEFA3P59666 94 aa9.03□□□□□ -0.96
TOP3A-215ENST00000583328 UBE2MP61081 183 aaKnown RBP9.03□□□□□ -0.96
TOP3A-215ENST00000583328 KLK9Q2XQG4 91 aa9.03□□□□□ -0.96
TOP3A-215ENST00000583328 TRIM16LQ309B1 348 aa9.03□□□□□ -0.96
TOP3A-215ENST00000583328 SP6Q3SY56 376 aa9.03□□□□□ -0.96
TOP3A-215ENST00000583328 APRG1Q8IVJ8 170 aa9.03□□□□□ -0.96
TOP3A-215ENST00000583328 GLYATL2Q8WU03 294 aa9.03□□□□□ -0.96
TOP3A-215ENST00000583328 SEC22AQ96IW7 307 aa9.03□□□□□ -0.96
TOP3A-215ENST00000583328 ZNF436Q9C0F3 470 aaPredicted RBP9.03□□□□□ -0.96
TOP3A-215ENST00000583328 C11orf68Q9H3H3 251 aaKnown RBP9.03□□□□□ -0.96
TOP3A-215ENST00000583328 KLK9Q9UKQ9 250 aa9.03□□□□□ -0.96
TOP3A-215ENST00000583328 FAM240BA0A1B0GVZ2 78 aa9.02□□□□□ -0.97
TOP3A-215ENST00000583328 DEFB4AO15263 64 aa9.02□□□□□ -0.97
TOP3A-215ENST00000583328 CDS2O95674 445 aa9.02□□□□□ -0.97
TOP3A-215ENST00000583328 TCRBP04435 133 aa9.02□□□□□ -0.97
TOP3A-215ENST00000583328 G6PCP35575 357 aa9.02□□□□□ -0.97
TOP3A-215ENST00000583328 RPL8P62917 257 aaKnown RBP9.02□□□□□ -0.97
TOP3A-215ENST00000583328 SUPT4H1P63272 117 aaKnown RBP9.02□□□□□ -0.97
TOP3A-215ENST00000583328 ZNF502Q8TBZ5 544 aa9.02□□□□□ -0.97
TOP3A-215ENST00000583328 TMEM190Q8WZ59 177 aa9.02□□□□□ -0.97
TOP3A-215ENST00000583328 C20orf85Q9H1P6 137 aa9.02□□□□□ -0.97
TOP3A-215ENST00000583328 DAZ1Q9NQZ3 744 aaKnown RBP9.02□□□□□ -0.97
TOP3A-215ENST00000583328 THYN1Q9P016 225 aa9.02□□□□□ -0.97
TOP3A-215ENST00000583328 PIGBOS1A0A0B4J2F0 54 aa9.01□□□□□ -0.97
TOP3A-215ENST00000583328 PRSS29PA6NIE9 313 aa9.01□□□□□ -0.97
TOP3A-215ENST00000583328 C11orf94C9JXX5 98 aa9.01□□□□□ -0.97
TOP3A-215ENST00000583328 UPK2O00526 184 aa9.01□□□□□ -0.97
TOP3A-215ENST00000583328 HLA-GP17693 338 aa9.01□□□□□ -0.97
TOP3A-215ENST00000583328 VAMP1P23763 118 aa9.01□□□□□ -0.97
TOP3A-215ENST00000583328 AKR1C2P52895 323 aa9.01□□□□□ -0.97
TOP3A-215ENST00000583328 CMC4P56277 68 aaPredicted RBP9.01□□□□□ -0.97
TOP3A-215ENST00000583328 SRPXP78539 464 aa9.01□□□□□ -0.97
TOP3A-215ENST00000583328 PPP1R1AQ13522 171 aa9.01□□□□□ -0.97
TOP3A-215ENST00000583328 TMEM187Q14656 261 aa9.01□□□□□ -0.97
TOP3A-215ENST00000583328 H2BFWTQ7Z2G1 175 aa9.01□□□□□ -0.97
TOP3A-215ENST00000583328 ENKURQ8TC29 256 aa9.01□□□□□ -0.97
TOP3A-215ENST00000583328 RBPMSQ93062 196 aaKnown RBP9.01□□□□□ -0.97
TOP3A-215ENST00000583328 IL22RA2Q969J5 263 aa9.01□□□□□ -0.97
TOP3A-215ENST00000583328 TMEM56Q96MV1 263 aa9.01□□□□□ -0.97
TOP3A-215ENST00000583328 C20orf24Q9BUV8 137 aa9.01□□□□□ -0.97
TOP3A-215ENST00000583328 FLVCR2Q9UPI3 526 aa9.01□□□□□ -0.97
TOP3A-215ENST00000583328 TMEM56-RWDD3S4R434 201 aa9.01□□□□□ -0.97
TOP3A-215ENST00000583328 MUC4Q99102 2169 aa9□□□□□ -0.97
TOP3A-215ENST00000583328 TRAV3A0A0B4J244 114 aa9□□□□□ -0.97
TOP3A-215ENST00000583328 TGOLN2O43493 480 aa9□□□□□ -0.97
TOP3A-215ENST00000583328 SNAPC5O75971 98 aa9□□□□□ -0.97
TOP3A-215ENST00000583328 SFT2D2O95562 160 aa9□□□□□ -0.97
TOP3A-215ENST00000583328 IGKV1-5P01602 117 aa9□□□□□ -0.97
TOP3A-215ENST00000583328 ADMP35318 185 aa9□□□□□ -0.97
TOP3A-215ENST00000583328 ZNF124Q15973 351 aa9□□□□□ -0.97
TOP3A-215ENST00000583328 TMEM268Q5VZI3 342 aa9□□□□□ -0.97
TOP3A-215ENST00000583328 FAM219AQ8IW50 185 aa9□□□□□ -0.97
TOP3A-215ENST00000583328 SELENOHQ8IZQ5 122 aaKnown RBP9□□□□□ -0.97
TOP3A-215ENST00000583328 LGI3Q8N145 548 aa9□□□□□ -0.97
TOP3A-215ENST00000583328 RNASE11Q8TAA1 199 aaKnown RBP9□□□□□ -0.97
TOP3A-215ENST00000583328 LHFPL5Q8TAF8 219 aa9□□□□□ -0.97
TOP3A-215ENST00000583328 RRNAD1Q96FB5 475 aaKnown RBP9□□□□□ -0.97
TOP3A-215ENST00000583328 COMMD5Q9GZQ3 224 aa9□□□□□ -0.97
TOP3A-215ENST00000583328 NUDT15Q9NV35 164 aa9□□□□□ -0.97
TOP3A-215ENST00000583328 PRNDQ9UKY0 176 aa9□□□□□ -0.97
TOP3A-215ENST00000583328 TRAV6A0A075B6T7 132 aa8.99□□□□□ -0.97
TOP3A-215ENST00000583328 IGHV3OR16-8A0A075B7F1 116 aa8.99□□□□□ -0.97
TOP3A-215ENST00000583328 OR2T8A6NH00 312 aa8.99□□□□□ -0.97
TOP3A-215ENST00000583328 C15orf61A6NNL5 157 aa8.99□□□□□ -0.97
TOP3A-215ENST00000583328 ZNF207O43670 478 aaKnown RBP8.99□□□□□ -0.97
TOP3A-215ENST00000583328 CA1P00915 261 aaPredicted RBP8.99□□□□□ -0.97
TOP3A-215ENST00000583328 OR4E1P0C645 316 aa8.99□□□□□ -0.97
TOP3A-215ENST00000583328 P0C879 139 aa8.99□□□□□ -0.97
TOP3A-215ENST00000583328 ANXA7P20073 488 aaKnown RBP8.99□□□□□ -0.97
TOP3A-215ENST00000583328 TFPI2P48307 235 aa8.99□□□□□ -0.97
TOP3A-215ENST00000583328 THOC7Q6I9Y2 204 aaKnown RBP8.99□□□□□ -0.97
TOP3A-215ENST00000583328 LRTM2Q8N967 370 aa8.99□□□□□ -0.97
TOP3A-215ENST00000583328 DUSP18Q8NEJ0 188 aa8.99□□□□□ -0.97
TOP3A-215ENST00000583328 OR4A16Q8NH70 328 aa8.99□□□□□ -0.97
TOP3A-215ENST00000583328 FKBP11Q9NYL4 201 aa8.99□□□□□ -0.97
TOP3A-215ENST00000583328 FAT2Q9NYQ8 4349 aa8.98□□□□□ -0.97
TOP3A-215ENST00000583328 IGKV3-7A0A075B6H7 116 aa8.98□□□□□ -0.97
TOP3A-215ENST00000583328 A0A0B4J2A0 478 aa8.98□□□□□ -0.97
TOP3A-215ENST00000583328 DUXBA0A1W2PPF3 345 aa8.98□□□□□ -0.97
TOP3A-215ENST00000583328 C9orf170A2RU37 121 aa8.98□□□□□ -0.97
TOP3A-215ENST00000583328 CGB1A6NKQ9 187 aa8.98□□□□□ -0.97
TOP3A-215ENST00000583328 NDUFA4O00483 81 aa8.98□□□□□ -0.97
TOP3A-215ENST00000583328 CYB5BO43169 146 aa8.98□□□□□ -0.97
TOP3A-215ENST00000583328 H2AFB2P0C5Z0 115 aa8.98□□□□□ -0.97
TOP3A-215ENST00000583328 OR2B8PP59922 312 aa8.98□□□□□ -0.97
TOP3A-215ENST00000583328 DHRS2Q13268 280 aa8.98□□□□□ -0.97
TOP3A-215ENST00000583328 C4orf46Q504U0 113 aa8.98□□□□□ -0.97
TOP3A-215ENST00000583328 NRARPQ7Z6K4 114 aa8.98□□□□□ -0.97
TOP3A-215ENST00000583328 SLC35G3Q8N808 338 aa8.98□□□□□ -0.97
TOP3A-215ENST00000583328 VN1R17PQ8TDU5 208 aa8.98□□□□□ -0.97
TOP3A-215ENST00000583328 LSM10Q969L4 123 aaKnown RBP8.98□□□□□ -0.97
TOP3A-215ENST00000583328 BSCL2Q96G97 398 aaPredicted RBP8.98□□□□□ -0.97
TOP3A-215ENST00000583328 TMEM14BQ9NUH8 114 aa8.98□□□□□ -0.97
TOP3A-215ENST00000583328 PRR13Q9NZ81 148 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms