RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 OR4A16Q8NH70 328 aa10.07□□□□□ -0.8
SS18-222ENST00000582792 LHFPL5Q8TAF8 219 aa10.07□□□□□ -0.8
SS18-222ENST00000582792 C20orf85Q9H1P6 137 aa10.07□□□□□ -0.8
SS18-222ENST00000582792 FLVCR2Q9UPI3 526 aa10.07□□□□□ -0.8
SS18-222ENST00000582792 IGLV11-55A0A075B6I3 123 aa10.06□□□□□ -0.8
SS18-222ENST00000582792 TRBV7-1A0A0A6YYK4 115 aa10.06□□□□□ -0.8
SS18-222ENST00000582792 TEX50A0A1B0GTY4 177 aa10.06□□□□□ -0.8
SS18-222ENST00000582792 C9orf170A2RU37 121 aa10.06□□□□□ -0.8
SS18-222ENST00000582792 MFSD2BA6NFX1 497 aa10.06□□□□□ -0.8
SS18-222ENST00000582792 DEDDO75618 318 aa10.06□□□□□ -0.8
SS18-222ENST00000582792 CLEC3BP05452 202 aa10.06□□□□□ -0.8
SS18-222ENST00000582792 OR4E1P0C645 316 aa10.06□□□□□ -0.8
SS18-222ENST00000582792 TRAPPC2P0DI81 140 aa10.06□□□□□ -0.8
SS18-222ENST00000582792 TRAPPC2BP0DI82 140 aa10.06□□□□□ -0.8
SS18-222ENST00000582792 ENKURQ8TC29 256 aa10.06□□□□□ -0.8
SS18-222ENST00000582792 CXorf58Q96LI9 332 aa10.06□□□□□ -0.8
SS18-222ENST00000582792 QTRT1Q9BXR0 403 aaKnown RBP10.06□□□□□ -0.8
SS18-222ENST00000582792 NDUFA4L2Q9NRX3 87 aa10.06□□□□□ -0.8
SS18-222ENST00000582792 MRPL27Q9P0M9 148 aaKnown RBP10.06□□□□□ -0.8
SS18-222ENST00000582792 OR51B2Q9Y5P1 312 aa10.06□□□□□ -0.8
SS18-222ENST00000582792 VPS13DQ5THJ4 4388 aa10.05□□□□□ -0.8
SS18-222ENST00000582792 KIAA1109Q2LD37 5005 aa10.05□□□□□ -0.8
SS18-222ENST00000582792 A0A0B4J293 547 aa10.05□□□□□ -0.8
SS18-222ENST00000582792 H2AFB2P0C5Z0 115 aa10.05□□□□□ -0.8
SS18-222ENST00000582792 SLC25A6P12236 298 aa10.05□□□□□ -0.8
SS18-222ENST00000582792 DEFA4P12838 97 aa10.05□□□□□ -0.8
SS18-222ENST00000582792 VAMP1P23763 118 aa10.05□□□□□ -0.8
SS18-222ENST00000582792 ELLP55199 621 aaPredicted RBP10.05□□□□□ -0.8
SS18-222ENST00000582792 HSPE1P61604 102 aaKnown RBP10.05□□□□□ -0.8
SS18-222ENST00000582792 DHRS2Q13268 280 aa10.05□□□□□ -0.8
SS18-222ENST00000582792 NMSQ5H8A3 153 aa10.05□□□□□ -0.8
SS18-222ENST00000582792 LGALS9CQ6DKI2 356 aa10.05□□□□□ -0.8
SS18-222ENST00000582792 TMEM217Q8N7C4 229 aa10.05□□□□□ -0.8
SS18-222ENST00000582792 OR52E5Q8NH55 327 aa10.05□□□□□ -0.8
SS18-222ENST00000582792 RNASE11Q8TAA1 199 aaKnown RBP10.05□□□□□ -0.8
SS18-222ENST00000582792 RNF183Q96D59 192 aa10.05□□□□□ -0.8
SS18-222ENST00000582792 SPAG8Q99932 426 aaPredicted RBP10.05□□□□□ -0.8
SS18-222ENST00000582792 UFC1Q9Y3C8 167 aa10.05□□□□□ -0.8
SS18-222ENST00000582792 KIR2DL5BA0A0G2JN68 375 aa10.04□□□□□ -0.8
SS18-222ENST00000582792 KIR2DL5BA0A0G2JPC4 375 aa10.04□□□□□ -0.8
SS18-222ENST00000582792 CGB1A6NKQ9 187 aa10.04□□□□□ -0.8
SS18-222ENST00000582792 INS-IGF2F8WCM5 200 aa10.04□□□□□ -0.8
SS18-222ENST00000582792 IL5P05113 134 aa10.04□□□□□ -0.8
SS18-222ENST00000582792 REG1AP05451 166 aa10.04□□□□□ -0.8
SS18-222ENST00000582792 ANXA7P20073 488 aaKnown RBP10.04□□□□□ -0.8
SS18-222ENST00000582792 GPR183P32249 361 aa10.04□□□□□ -0.8
SS18-222ENST00000582792 KIR2DL5AQ8N109 375 aa10.04□□□□□ -0.8
SS18-222ENST00000582792 STPG3Q8N7X2 389 aa10.04□□□□□ -0.8
SS18-222ENST00000582792 SLC35G3Q8N808 338 aa10.04□□□□□ -0.8
SS18-222ENST00000582792 KIR2DL5BQ8NHK3 375 aa10.04□□□□□ -0.8
SS18-222ENST00000582792 COQ8AQ8NI60 647 aa10.04□□□□□ -0.8
SS18-222ENST00000582792 ZNF502Q8TBZ5 544 aa10.04□□□□□ -0.8
SS18-222ENST00000582792 PHLDA1Q8WV24 401 aaPredicted RBP10.04□□□□□ -0.8
SS18-222ENST00000582792 GPR146Q96CH1 333 aa10.04□□□□□ -0.8
SS18-222ENST00000582792 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.04□□□□□ -0.8
SS18-222ENST00000582792 NUDT15Q9NV35 164 aa10.04□□□□□ -0.8
SS18-222ENST00000582792 UBQLN2Q9UHD9 624 aa10.04□□□□□ -0.8
SS18-222ENST00000582792 NSG2Q9Y328 171 aa10.04□□□□□ -0.8
SS18-222ENST00000582792 TMED3Q9Y3Q3 217 aa10.04□□□□□ -0.8
SS18-222ENST00000582792 A0A0G2JRQ6 117 aa10.03□□□□□ -0.8
SS18-222ENST00000582792 A0A1B0GU03 582 aa10.03□□□□□ -0.8
SS18-222ENST00000582792 IGLC7A0M8Q6 106 aa10.03□□□□□ -0.8
SS18-222ENST00000582792 TSPAN4O14817 238 aa10.03□□□□□ -0.8
SS18-222ENST00000582792 SULT1A3P0DMM9 295 aa10.03□□□□□ -0.8
SS18-222ENST00000582792 SULT1A4P0DMN0 295 aa10.03□□□□□ -0.8
SS18-222ENST00000582792 MYOD1P15172 320 aa10.03□□□□□ -0.8
SS18-222ENST00000582792 PRCDQ00LT1 54 aa10.03□□□□□ -0.8
SS18-222ENST00000582792 C4orf46Q504U0 113 aa10.03□□□□□ -0.8
SS18-222ENST00000582792 Q6ZRM9 215 aa10.03□□□□□ -0.8
SS18-222ENST00000582792 LYZL2Q7Z4W2 148 aa10.03□□□□□ -0.8
SS18-222ENST00000582792 NRARPQ7Z6K4 114 aa10.03□□□□□ -0.8
SS18-222ENST00000582792 MITD1Q8WV92 249 aa10.03□□□□□ -0.8
SS18-222ENST00000582792 ZNF436Q9C0F3 470 aaPredicted RBP10.03□□□□□ -0.8
SS18-222ENST00000582792 TRAV6A0A075B6T7 132 aa10.02□□□□□ -0.81
SS18-222ENST00000582792 IGHV3-35A0A0C4DH35 117 aa10.02□□□□□ -0.81
SS18-222ENST00000582792 DBX1A6NMT0 343 aa10.02□□□□□ -0.81
SS18-222ENST00000582792 CYB5BO43169 146 aa10.02□□□□□ -0.81
SS18-222ENST00000582792 PRAF2O60831 178 aa10.02□□□□□ -0.81
SS18-222ENST00000582792 PTTG1O95997 202 aa10.02□□□□□ -0.81
SS18-222ENST00000582792 SPCS3P61009 180 aa10.02□□□□□ -0.81
SS18-222ENST00000582792 SMCO1Q147U7 214 aa10.02□□□□□ -0.81
SS18-222ENST00000582792 ODF3L2Q3SX64 289 aa10.02□□□□□ -0.81
SS18-222ENST00000582792 PLET1Q6UQ28 207 aa10.02□□□□□ -0.81
SS18-222ENST00000582792 ZNF431Q8TF32 576 aaPredicted RBP10.02□□□□□ -0.81
SS18-222ENST00000582792 MARVELD1Q9BSK0 173 aa10.02□□□□□ -0.81
SS18-222ENST00000582792 PDCD10Q9BUL8 212 aa10.02□□□□□ -0.81
SS18-222ENST00000582792 PRR13Q9NZ81 148 aa10.02□□□□□ -0.81
SS18-222ENST00000582792 CACNG5Q9UF02 275 aa10.02□□□□□ -0.81
SS18-222ENST00000582792 ST8SIA3O43173 380 aa10.01□□□□□ -0.81
SS18-222ENST00000582792 TGOLN2O43493 480 aa10.01□□□□□ -0.81
SS18-222ENST00000582792 IZUMO4Q1ZYL8 232 aa10.01□□□□□ -0.81
SS18-222ENST00000582792 ZNF114Q8NC26 417 aa10.01□□□□□ -0.81
SS18-222ENST00000582792 TMEM190Q8WZ59 177 aa10.01□□□□□ -0.81
SS18-222ENST00000582792 THYN1Q9P016 225 aa10.01□□□□□ -0.81
SS18-222ENST00000582792 RYR1P21817 5038 aa10□□□□□ -0.81
SS18-222ENST00000582792 FAM90A26D6RGX4 464 aa10□□□□□ -0.81
SS18-222ENST00000582792 INMT-MINDY4F8WBC2 141 aa10□□□□□ -0.81
SS18-222ENST00000582792 PITX3O75364 302 aa10□□□□□ -0.81
SS18-222ENST00000582792 IFNA21P01568 189 aa10□□□□□ -0.81
SS18-222ENST00000582792 IFNA17P01571 189 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms