RNA–Protein interactions for RNA: ENST00000582242.1

CDH8-207, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-207ENST00000582242 C1orf185Q5T7R7 199 aa6.53□□□□□ -1.36
CDH8-207ENST00000582242 WDR25Q64LD2 544 aaPredicted RBP6.53□□□□□ -1.36
CDH8-207ENST00000582242 KCNIP4Q6PIL6 250 aa6.53□□□□□ -1.36
CDH8-207ENST00000582242 BTNL3Q6UXE8 466 aa6.53□□□□□ -1.36
CDH8-207ENST00000582242 SSX8Q7RTT4 187 aa6.53□□□□□ -1.36
CDH8-207ENST00000582242 SLC16A13Q7RTY0 426 aa6.53□□□□□ -1.36
CDH8-207ENST00000582242 RPP25LQ8N5L8 163 aaKnown RBP6.53□□□□□ -1.36
CDH8-207ENST00000582242 CD177Q8N6Q3 437 aa6.53□□□□□ -1.36
CDH8-207ENST00000582242 DEFB124Q8NES8 71 aa6.53□□□□□ -1.36
CDH8-207ENST00000582242 STARD4Q96DR4 205 aa6.53□□□□□ -1.36
CDH8-207ENST00000582242 SPAG8Q99932 426 aaPredicted RBP6.53□□□□□ -1.36
CDH8-207ENST00000582242 SLC25A22Q9H936 323 aa6.53□□□□□ -1.36
CDH8-207ENST00000582242 ENY2Q9NPA8 101 aa6.53□□□□□ -1.36
CDH8-207ENST00000582242 ARID1AO14497 2285 aa6.53□□□□□ -1.36
CDH8-207ENST00000582242 TRGV10A0A0A0MS01 117 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 TGIF2-C20orf24A0A0A6YYL0 155 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 IGHV3-43A0A0B4J1X8 118 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 IGHV3-64DA0A0J9YX35 117 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 A0A1W2PPV4 95 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 FNDC10F2Z333 226 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 MT-CO2P00403 227 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 HRASP01112 189 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 IGHV3-43DP0DP04 118 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 CD99P14209 185 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 CD1BP29016 333 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 ATP5IP56385 69 aaPredicted RBP6.52□□□□□ -1.37
CDH8-207ENST00000582242 HERV-K104P63124 156 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 TFF3Q07654 80 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 RAB31Q13636 194 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 DEFB109BQ30KR1 87 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 ZNF343Q6P1L6 599 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 IGFL3Q6UXB1 125 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 Q6ZRP5 223 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 SSX7Q7RTT5 188 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 OR10A7Q8NGE5 316 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 OR4F5Q8NH21 305 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 OR4F4Q96R69 305 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 LITAFQ99732 161 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 OVOL2Q9BRP0 275 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 SFXN3Q9BWM7 321 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 OPN3Q9H1Y3 402 aaPredicted RBP6.52□□□□□ -1.37
CDH8-207ENST00000582242 PARLQ9H300 379 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 CALYQ9NYX4 217 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 DOK5Q9P104 306 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 PITPNC1Q9UKF7 332 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 URGCP-MRPS24S4R325 110 aa6.52□□□□□ -1.37
CDH8-207ENST00000582242 PTPRBP23467 1997 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 CACNA1GO43497 2377 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 IGLV3-9A0A075B6K5 115 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 IGKV1D-17A0A075B6S4 117 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 A0A087X002 238 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 ZNF729A6NN14 1252 aaPredicted RBP6.51□□□□□ -1.37
CDH8-207ENST00000582242 C11orf94C9JXX5 98 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 PPP5D1E7EU14 171 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 M0R1B8 84 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 HIST1H2BKO60814 126 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 CXorf1O96002 111 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 IFNA10P01566 189 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 IGKV1D-33P01593 117 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 IGKV1-33P01594 117 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 GYPAP02724 150 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 HIST1H2BJP06899 126 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 HIST1H2BOP23527 126 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 GPR183P32249 361 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 HIST1H2BBP33778 126 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 GALR1P47211 349 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 ZNF83P51522 516 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 HIST1H2BDP58876 126 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 SSTP61278 116 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 HIST1H2BCP62807 126 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 RPL23P62829 140 aaKnown RBP6.51□□□□□ -1.37
CDH8-207ENST00000582242 SSX2Q16385 188 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 HIST2H2BEQ16778 126 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 KRTAP24-1Q3LI83 254 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.51□□□□□ -1.37
CDH8-207ENST00000582242 NCMAPQ5T1S8 102 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 FAM222BQ8WU58 562 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 HIST1H2BHQ93079 126 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 RPUSD4Q96CM3 377 aaKnown RBP6.51□□□□□ -1.37
CDH8-207ENST00000582242 ACY3Q96HD9 319 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 DUX3Q96PT4 197 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 OR2V2Q96R30 315 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 IMMP2LQ96T52 175 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 PFDN5Q99471 154 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 HIST1H2BNQ99877 126 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 HIST1H2BMQ99879 126 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 PYGO2Q9BRQ0 406 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 FZR1Q9UM11 496 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 ARL2-SNX15V9GYD0 113 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 TRIOO75962 3097 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 LAMA1P25391 3075 aa6.51□□□□□ -1.37
CDH8-207ENST00000582242 KBTBD11-OT1A0A1B0GTJ5 212 aa6.5□□□□□ -1.37
CDH8-207ENST00000582242 SPAARA0A1B0GVQ0 90 aa6.5□□□□□ -1.37
CDH8-207ENST00000582242 LHBP01229 141 aa6.5□□□□□ -1.37
CDH8-207ENST00000582242 TRGC2P03986 189 aa6.5□□□□□ -1.37
CDH8-207ENST00000582242 OR9G9P0C7N8 305 aa6.5□□□□□ -1.37
CDH8-207ENST00000582242 VDAC2P45880 294 aaPredicted RBP6.5□□□□□ -1.37
CDH8-207ENST00000582242 EDDM3BP56851 147 aa6.5□□□□□ -1.37
CDH8-207ENST00000582242 LCN2P80188 198 aa6.5□□□□□ -1.37
CDH8-207ENST00000582242 POU2AF1Q16633 256 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms