RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 SEC14L6B5MCN3 397 aa11.74□□□□□ -0.53
CDK5RAP3-218ENST00000580391 LINC00869P0C866 280 aa11.74□□□□□ -0.53
CDK5RAP3-218ENST00000580391 GATA3P23771 443 aa11.74□□□□□ -0.53
CDK5RAP3-218ENST00000580391 RND2P52198 227 aa11.74□□□□□ -0.53
CDK5RAP3-218ENST00000580391 ASPHD1Q5U4P2 390 aa11.74□□□□□ -0.53
CDK5RAP3-218ENST00000580391 ZNF562Q6V9R5 426 aa11.74□□□□□ -0.53
CDK5RAP3-218ENST00000580391 NPIPB3Q92617 1050 aa11.74□□□□□ -0.53
CDK5RAP3-218ENST00000580391 Q96MF0 132 aa11.74□□□□□ -0.53
CDK5RAP3-218ENST00000580391 C1RLQ9NZP8 487 aa11.74□□□□□ -0.53
CDK5RAP3-218ENST00000580391 ZFP92A6NM28 416 aa11.74□□□□□ -0.53
CDK5RAP3-218ENST00000580391 CYB5BO43169 146 aa11.74□□□□□ -0.53
CDK5RAP3-218ENST00000580391 CRYGCP07315 174 aa11.74□□□□□ -0.53
CDK5RAP3-218ENST00000580391 ICAM4Q14773 271 aa11.74□□□□□ -0.53
CDK5RAP3-218ENST00000580391 GUCA2BQ16661 112 aa11.74□□□□□ -0.53
CDK5RAP3-218ENST00000580391 C10orf91Q5T1B1 145 aa11.74□□□□□ -0.53
CDK5RAP3-218ENST00000580391 TMEM219Q86XT9 240 aa11.74□□□□□ -0.53
CDK5RAP3-218ENST00000580391 HSPB9Q9BQS6 159 aa11.74□□□□□ -0.53
CDK5RAP3-218ENST00000580391 SLC25A33Q9BSK2 321 aa11.74□□□□□ -0.53
CDK5RAP3-218ENST00000580391 WNT10AQ9GZT5 417 aa11.74□□□□□ -0.53
CDK5RAP3-218ENST00000580391 TMPRSS5Q9H3S3 457 aa11.74□□□□□ -0.53
CDK5RAP3-218ENST00000580391 PRRC2AP48634 2157 aaKnown RBP11.74□□□□□ -0.53
CDK5RAP3-218ENST00000580391 IGKV1D-37A0A075B6S9 117 aa11.73□□□□□ -0.53
CDK5RAP3-218ENST00000580391 LOC102723971A0A1B0GUV8 181 aa11.73□□□□□ -0.53
CDK5RAP3-218ENST00000580391 MT-CO2P00403 227 aa11.73□□□□□ -0.53
CDK5RAP3-218ENST00000580391 HLA-DRB1P01911 266 aa11.73□□□□□ -0.53
CDK5RAP3-218ENST00000580391 DEFA5Q01523 94 aa11.73□□□□□ -0.53
CDK5RAP3-218ENST00000580391 ZNF506Q5JVG8 444 aa11.73□□□□□ -0.53
CDK5RAP3-218ENST00000580391 PIFOQ8TCI5 191 aa11.73□□□□□ -0.53
CDK5RAP3-218ENST00000580391 RXFP4Q8TDU9 374 aa11.73□□□□□ -0.53
CDK5RAP3-218ENST00000580391 MBD6Q96DN6 1003 aa11.73□□□□□ -0.53
CDK5RAP3-218ENST00000580391 SEC11CQ9BY50 192 aa11.73□□□□□ -0.53
CDK5RAP3-218ENST00000580391 CARHSP1Q9Y2V2 147 aaKnown RBP11.73□□□□□ -0.53
CDK5RAP3-218ENST00000580391 ZNF469Q96JG9 3925 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-218ENST00000580391 SH2D7A6NKC9 451 aaPredicted RBP11.72□□□□□ -0.53
CDK5RAP3-218ENST00000580391 CORTO00230 105 aa11.72□□□□□ -0.53
CDK5RAP3-218ENST00000580391 TGFAP01135 160 aa11.72□□□□□ -0.53
CDK5RAP3-218ENST00000580391 IGHV4-31P0DP07 118 aa11.72□□□□□ -0.53
CDK5RAP3-218ENST00000580391 SPATA31B1PQ5VZV4 182 aa11.72□□□□□ -0.53
CDK5RAP3-218ENST00000580391 ATRAIDQ6UW56 229 aa11.72□□□□□ -0.53
CDK5RAP3-218ENST00000580391 THAP8Q8NA92 274 aa11.72□□□□□ -0.53
CDK5RAP3-218ENST00000580391 MEGF9Q9H1U4 602 aa11.72□□□□□ -0.53
CDK5RAP3-218ENST00000580391 ITPR3Q14573 2671 aa11.72□□□□□ -0.53
CDK5RAP3-218ENST00000580391 A0A1W2PPV4 95 aa11.72□□□□□ -0.53
CDK5RAP3-218ENST00000580391 BCL2P10415 239 aa11.72□□□□□ -0.53
CDK5RAP3-218ENST00000580391 TMEM249Q2WGJ8 235 aa11.72□□□□□ -0.53
CDK5RAP3-218ENST00000580391 ETFRF1Q6IPR1 90 aa11.72□□□□□ -0.53
CDK5RAP3-218ENST00000580391 CYP2G1PQ6ZSU1 146 aa11.72□□□□□ -0.53
CDK5RAP3-218ENST00000580391 IQCF2Q8IXL9 164 aa11.72□□□□□ -0.53
CDK5RAP3-218ENST00000580391 RASL11BQ9BPW5 248 aa11.72□□□□□ -0.53
CDK5RAP3-218ENST00000580391 FBP1P09467 338 aa11.71□□□□□ -0.53
CDK5RAP3-218ENST00000580391 EGR2P11161 476 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP3-218ENST00000580391 ZNF90Q03938 601 aa11.71□□□□□ -0.53
CDK5RAP3-218ENST00000580391 SSX3Q99909 188 aa11.71□□□□□ -0.53
CDK5RAP3-218ENST00000580391 SEPSECSQ9HD40 501 aaKnown RBP11.71□□□□□ -0.53
CDK5RAP3-218ENST00000580391 TCRBV4S1A1TA0A5B7 111 aa11.7□□□□□ -0.54
CDK5RAP3-218ENST00000580391 I3L2K1 104 aa11.7□□□□□ -0.54
CDK5RAP3-218ENST00000580391 C5orf56Q8N8D9 126 aa11.7□□□□□ -0.54
CDK5RAP3-218ENST00000580391 GATAD1Q8WUU5 269 aa11.7□□□□□ -0.54
CDK5RAP3-218ENST00000580391 SLC35B3Q9H1N7 401 aa11.7□□□□□ -0.54
CDK5RAP3-218ENST00000580391 PDZD2O15018 2839 aa11.7□□□□□ -0.54
CDK5RAP3-218ENST00000580391 CCDC168Q8NDH2 2452 aa11.7□□□□□ -0.54
CDK5RAP3-218ENST00000580391 MDFIC2A0A1B0GVS7 189 aa11.7□□□□□ -0.54
CDK5RAP3-218ENST00000580391 NPIPB5A8MRT5 1133 aa11.7□□□□□ -0.54
CDK5RAP3-218ENST00000580391 K7EIM0 57 aa11.7□□□□□ -0.54
CDK5RAP3-218ENST00000580391 SRP19P09132 144 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-218ENST00000580391 KHDC3LQ587J8 217 aa11.7□□□□□ -0.54
CDK5RAP3-218ENST00000580391 TMEM116Q8NCL8 245 aa11.7□□□□□ -0.54
CDK5RAP3-218ENST00000580391 C22orf15Q8WYQ4 148 aa11.7□□□□□ -0.54
CDK5RAP3-218ENST00000580391 RBM14Q96PK6 669 aaKnown RBP11.7□□□□□ -0.54
CDK5RAP3-218ENST00000580391 GSX1Q9H4S2 264 aaPredicted RBP11.7□□□□□ -0.54
CDK5RAP3-218ENST00000580391 MOB4Q9Y3A3 225 aa11.7□□□□□ -0.54
CDK5RAP3-218ENST00000580391 ITPR2Q14571 2701 aa11.69□□□□□ -0.54
CDK5RAP3-218ENST00000580391 H3BUX3 64 aa11.69□□□□□ -0.54
CDK5RAP3-218ENST00000580391 J3QLI3 93 aa11.69□□□□□ -0.54
CDK5RAP3-218ENST00000580391 ATP6V0E1O15342 81 aa11.69□□□□□ -0.54
CDK5RAP3-218ENST00000580391 STAG3L2P0CL84 134 aa11.69□□□□□ -0.54
CDK5RAP3-218ENST00000580391 STAG3L3P0CL85 134 aa11.69□□□□□ -0.54
CDK5RAP3-218ENST00000580391 ARL14EPLP0DKL9 152 aa11.69□□□□□ -0.54
CDK5RAP3-218ENST00000580391 RHOBP62745 196 aa11.69□□□□□ -0.54
CDK5RAP3-218ENST00000580391 LY6EQ16553 131 aa11.69□□□□□ -0.54
CDK5RAP3-218ENST00000580391 FAM78BQ5VT40 261 aa11.69□□□□□ -0.54
CDK5RAP3-218ENST00000580391 PRSS57Q6UWY2 283 aa11.69□□□□□ -0.54
CDK5RAP3-218ENST00000580391 SMDT1Q9H4I9 107 aa11.69□□□□□ -0.54
CDK5RAP3-218ENST00000580391 UNC79Q9P2D8 2635 aa11.69□□□□□ -0.54
CDK5RAP3-218ENST00000580391 PSMB11A5LHX3 300 aa11.68□□□□□ -0.54
CDK5RAP3-218ENST00000580391 IFNA1P01562 189 aa11.68□□□□□ -0.54
CDK5RAP3-218ENST00000580391 HSPB1P04792 205 aaKnown RBP11.68□□□□□ -0.54
CDK5RAP3-218ENST00000580391 MIR17HGQ75NE6 70 aa11.68□□□□□ -0.54
CDK5RAP3-218ENST00000580391 SVBPQ8N300 66 aa11.68□□□□□ -0.54
CDK5RAP3-218ENST00000580391 TTC9CQ8N5M4 171 aa11.68□□□□□ -0.54
CDK5RAP3-218ENST00000580391 CYB561D1Q8N8Q1 229 aa11.68□□□□□ -0.54
CDK5RAP3-218ENST00000580391 FANCD2OSQ96PS1 177 aa11.68□□□□□ -0.54
CDK5RAP3-218ENST00000580391 TNFRSF19Q9NS68 423 aa11.68□□□□□ -0.54
CDK5RAP3-218ENST00000580391 DOK5Q9P104 306 aa11.68□□□□□ -0.54
CDK5RAP3-218ENST00000580391 TEX15Q9BXT5 2789 aa11.68□□□□□ -0.54
CDK5RAP3-218ENST00000580391 IGLV11-55A0A075B6I3 123 aa11.68□□□□□ -0.54
CDK5RAP3-218ENST00000580391 AMY1AP04745 511 aa11.68□□□□□ -0.54
CDK5RAP3-218ENST00000580391 CEBPGP53567 150 aa11.68□□□□□ -0.54
CDK5RAP3-218ENST00000580391 ECSCRQ19T08 205 aa11.68□□□□□ -0.54
CDK5RAP3-218ENST00000580391 OR5T1Q8NG75 326 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms